RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 NOL7Q9UMY1 257 aaKnown RBP13.05□□□□□ -0.32
SLIRP-212ENST00000613856 CNPY2Q9Y2B0 182 aa13.05□□□□□ -0.32
SLIRP-212ENST00000613856 MRPL11Q9Y3B7 192 aaKnown RBP13.05□□□□□ -0.32
SLIRP-212ENST00000613856 MORC2Q9Y6X9 1032 aaPredicted RBP13.05□□□□□ -0.32
SLIRP-212ENST00000613856 CCDC194A0A1B0GVG4 234 aa13.04□□□□□ -0.32
SLIRP-212ENST00000613856 OPLAHO14841 1288 aa13.04□□□□□ -0.32
SLIRP-212ENST00000613856 ADAMTS3O15072 1205 aa13.04□□□□□ -0.32
SLIRP-212ENST00000613856 YEATS4O95619 227 aa13.04□□□□□ -0.32
SLIRP-212ENST00000613856 XRCC5P13010 732 aaKnown RBP13.04□□□□□ -0.32
SLIRP-212ENST00000613856 NCLP19338 710 aaKnown RBP13.04□□□□□ -0.32
SLIRP-212ENST00000613856 IRX3P78415 501 aaPredicted RBP13.04□□□□□ -0.32
SLIRP-212ENST00000613856 AP3B2Q13367 1082 aa13.04□□□□□ -0.32
SLIRP-212ENST00000613856 EARS2Q5JPH6 523 aaKnown RBP13.04□□□□□ -0.32
SLIRP-212ENST00000613856 ZNF697Q5TEC3 545 aa13.04□□□□□ -0.32
SLIRP-212ENST00000613856 GPR142Q7Z601 462 aa13.04□□□□□ -0.32
SLIRP-212ENST00000613856 SAMD3Q8N6K7 520 aa13.04□□□□□ -0.32
SLIRP-212ENST00000613856 GTF3C2Q8WUA4 911 aaPredicted RBP13.04□□□□□ -0.32
SLIRP-212ENST00000613856 PAGR1Q9BTK6 254 aa13.04□□□□□ -0.32
SLIRP-212ENST00000613856 ZNF214Q9UL59 606 aaPredicted RBP13.04□□□□□ -0.32
SLIRP-212ENST00000613856 CTDP1Q9Y5B0 961 aaPredicted RBP13.04□□□□□ -0.32
SLIRP-212ENST00000613856 FAM205CA6NFA0 338 aa13.03□□□□□ -0.32
SLIRP-212ENST00000613856 MEIS2O14770 477 aa13.03□□□□□ -0.32
SLIRP-212ENST00000613856 FIBPO43427 364 aa13.03□□□□□ -0.32
SLIRP-212ENST00000613856 TOB1P50616 345 aaPredicted RBP13.03□□□□□ -0.32
SLIRP-212ENST00000613856 ERVK-9P63128 1117 aa13.03□□□□□ -0.32
SLIRP-212ENST00000613856 ERVK-24P63145 666 aa13.03□□□□□ -0.32
SLIRP-212ENST00000613856 NONOQ15233 471 aaKnown RBP eCLIP13.03□□□□□ -0.32
SLIRP-212ENST00000613856 TKFCQ3LXA3 575 aa13.03□□□□□ -0.32
SLIRP-212ENST00000613856 ANO1Q5XXA6 986 aa13.03□□□□□ -0.32
SLIRP-212ENST00000613856 SAMD1Q6SPF0 538 aaPredicted RBP13.03□□□□□ -0.32
SLIRP-212ENST00000613856 PIK3AP1Q6ZUJ8 805 aa13.03□□□□□ -0.32
SLIRP-212ENST00000613856 TRPV1Q8NER1 839 aa13.03□□□□□ -0.32
SLIRP-212ENST00000613856 GPRC5AQ8NFJ5 357 aa13.03□□□□□ -0.32
SLIRP-212ENST00000613856 RASGRP4Q8TDF6 673 aa13.03□□□□□ -0.32
SLIRP-212ENST00000613856 LEO1Q8WVC0 666 aaPredicted RBP13.03□□□□□ -0.32
SLIRP-212ENST00000613856 SOCS4Q8WXH5 440 aa13.03□□□□□ -0.32
SLIRP-212ENST00000613856 AGBL1Q96MI9 1066 aa13.03□□□□□ -0.32
SLIRP-212ENST00000613856 TEX13BQ9BXU2 312 aa13.03□□□□□ -0.32
SLIRP-212ENST00000613856 RAVER2Q9HCJ3 691 aaKnown RBP13.03□□□□□ -0.32
SLIRP-212ENST00000613856 LCTP09848 1927 aa13.02□□□□□ -0.32
SLIRP-212ENST00000613856 CNMDO75829 334 aa13.02□□□□□ -0.33
SLIRP-212ENST00000613856 BMP15O95972 392 aa13.02□□□□□ -0.33
SLIRP-212ENST00000613856 FOSP01100 380 aaPredicted RBP13.02□□□□□ -0.33
SLIRP-212ENST00000613856 ORC2Q13416 577 aaPredicted RBP13.02□□□□□ -0.33
SLIRP-212ENST00000613856 TMEM132BQ14DG7 1078 aa13.02□□□□□ -0.33
SLIRP-212ENST00000613856 UBE2SQ16763 222 aa13.02□□□□□ -0.33
SLIRP-212ENST00000613856 USP38Q8NB14 1042 aa13.02□□□□□ -0.33
SLIRP-212ENST00000613856 LINC00301Q8NCQ3 95 aa13.02□□□□□ -0.33
SLIRP-212ENST00000613856 CLEC4DQ8WXI8 215 aa13.02□□□□□ -0.33
SLIRP-212ENST00000613856 SPATA32Q96LK8 384 aa13.02□□□□□ -0.33
SLIRP-212ENST00000613856 APBA2Q99767 749 aa13.02□□□□□ -0.33
SLIRP-212ENST00000613856 SEMA6BQ9H3T3 888 aa13.02□□□□□ -0.33
SLIRP-212ENST00000613856 MAP3K20Q9NYL2 800 aaKnown RBP13.02□□□□□ -0.33
SLIRP-212ENST00000613856 RCOR1Q9UKL0 485 aa13.02□□□□□ -0.33
SLIRP-212ENST00000613856 TAL1P17542 331 aaPredicted RBP13.01□□□□□ -0.33
SLIRP-212ENST00000613856 COPB2P35606 906 aa13.01□□□□□ -0.33
SLIRP-212ENST00000613856 HSD17B4P51659 736 aa13.01□□□□□ -0.33
SLIRP-212ENST00000613856 RTP1P59025 263 aa13.01□□□□□ -0.33
SLIRP-212ENST00000613856 PTPAQ15257 358 aa13.01□□□□□ -0.33
SLIRP-212ENST00000613856 SF3A1Q15459 793 aaKnown RBP13.01□□□□□ -0.33
SLIRP-212ENST00000613856 TTC38Q5R3I4 469 aa13.01□□□□□ -0.33
SLIRP-212ENST00000613856 JAKMIP3Q5VZ66 844 aa13.01□□□□□ -0.33
SLIRP-212ENST00000613856 SNRNP48Q6IEG0 339 aaKnown RBP13.01□□□□□ -0.33
SLIRP-212ENST00000613856 SH3RF1Q7Z6J0 888 aa13.01□□□□□ -0.33
SLIRP-212ENST00000613856 MCF2L2Q86YR7 1114 aa13.01□□□□□ -0.33
SLIRP-212ENST00000613856 CPXCR1Q8N123 301 aa13.01□□□□□ -0.33
SLIRP-212ENST00000613856 NPLOC4Q8TAT6 608 aa13.01□□□□□ -0.33
SLIRP-212ENST00000613856 KCNG4Q8TDN1 519 aa13.01□□□□□ -0.33
SLIRP-212ENST00000613856 LBHD1Q9BQE6 289 aaPredicted RBP13.01□□□□□ -0.33
SLIRP-212ENST00000613856 FTOQ9C0B1 505 aaKnown RBP eCLIP13.01□□□□□ -0.33
SLIRP-212ENST00000613856 GDPD2Q9HCC8 539 aa13.01□□□□□ -0.33
SLIRP-212ENST00000613856 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.01□□□□□ -0.33
SLIRP-212ENST00000613856 LMBRD1Q9NUN5 540 aa13.01□□□□□ -0.33
SLIRP-212ENST00000613856 TMEM260Q9NX78 707 aa13.01□□□□□ -0.33
SLIRP-212ENST00000613856 TFIP11Q9UBB9 837 aaKnown RBP13.01□□□□□ -0.33
SLIRP-212ENST00000613856 CEP131Q9UPN4 1083 aa13.01□□□□□ -0.33
SLIRP-212ENST00000613856 CLIC4Q9Y696 253 aa13.01□□□□□ -0.33
SLIRP-212ENST00000613856 TTC28Q96AY4 2481 aa13□□□□□ -0.33
SLIRP-212ENST00000613856 GCOM1H8Y6P7 765 aaPredicted RBP13□□□□□ -0.33
SLIRP-212ENST00000613856 POLR2MP0CAP2 368 aa13□□□□□ -0.33
SLIRP-212ENST00000613856 ALAS1P13196 640 aa13□□□□□ -0.33
SLIRP-212ENST00000613856 CYP2C19P33261 490 aa13□□□□□ -0.33
SLIRP-212ENST00000613856 STAT3P40763 770 aa13□□□□□ -0.33
SLIRP-212ENST00000613856 RGS2P41220 211 aa13□□□□□ -0.33
SLIRP-212ENST00000613856 SLC39A14Q15043 492 aa13□□□□□ -0.33
SLIRP-212ENST00000613856 STK38Q15208 465 aa13□□□□□ -0.33
SLIRP-212ENST00000613856 INF2Q27J81 1249 aa13□□□□□ -0.33
SLIRP-212ENST00000613856 GJC2Q5T442 439 aaPredicted RBP13□□□□□ -0.33
SLIRP-212ENST00000613856 USP17L6PQ6QN14 398 aa13□□□□□ -0.33
SLIRP-212ENST00000613856 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13□□□□□ -0.33
SLIRP-212ENST00000613856 PLEKHH3Q7Z736 793 aa13□□□□□ -0.33
SLIRP-212ENST00000613856 NEK8Q86SG6 692 aa13□□□□□ -0.33
SLIRP-212ENST00000613856 RIOX2Q8IUF8 465 aa13□□□□□ -0.33
SLIRP-212ENST00000613856 NAP1L4Q99733 375 aaKnown RBP13□□□□□ -0.33
SLIRP-212ENST00000613856 ANO3Q9BYT9 981 aa13□□□□□ -0.33
SLIRP-212ENST00000613856 RNF146Q9NTX7 359 aa13□□□□□ -0.33
SLIRP-212ENST00000613856 ATP11BQ9Y2G3 1177 aa13□□□□□ -0.33
SLIRP-212ENST00000613856 RABGAP1Q9Y3P9 1069 aa13□□□□□ -0.33
SLIRP-212ENST00000613856 PCDHB6Q9Y5E3 794 aa13□□□□□ -0.33
SLIRP-212ENST00000613856 FRMPD4Q14CM0 1322 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms