RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 SEPT14Q6ZU15 432 aa20.22■□□□□ 0.83
CSNK1E-215ENST00000612795 C7orf31Q8N865 590 aa20.22■□□□□ 0.83
CSNK1E-215ENST00000612795 FBXO22Q8NEZ5 403 aa20.22■□□□□ 0.83
CSNK1E-215ENST00000612795 DHX38Q92620 1227 aaKnown RBP20.22■□□□□ 0.83
CSNK1E-215ENST00000612795 DCTPP1Q9H773 170 aa20.22■□□□□ 0.83
CSNK1E-215ENST00000612795 GTF2IRD1Q9UHL9 959 aa20.22■□□□□ 0.83
CSNK1E-215ENST00000612795 ANAPC4Q9UJX5 808 aa20.22■□□□□ 0.83
CSNK1E-215ENST00000612795 FOXP2O15409 715 aa20.21■□□□□ 0.83
CSNK1E-215ENST00000612795 PDHBP11177 359 aa20.21■□□□□ 0.83
CSNK1E-215ENST00000612795 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.21■□□□□ 0.83
CSNK1E-215ENST00000612795 PI4K2BQ8TCG2 481 aa20.21■□□□□ 0.83
CSNK1E-215ENST00000612795 KATNAL1Q9BW62 490 aa20.21■□□□□ 0.83
CSNK1E-215ENST00000612795 RALGAPA2Q2PPJ7 1873 aa20.21■□□□□ 0.83
CSNK1E-215ENST00000612795 ARHGAP1Q07960 439 aa20.2■□□□□ 0.82
CSNK1E-215ENST00000612795 ZNF543Q08ER8 600 aa20.2■□□□□ 0.82
CSNK1E-215ENST00000612795 LY6KQ17RY6 165 aa20.2■□□□□ 0.82
CSNK1E-215ENST00000612795 TCTN1Q2MV58 587 aa20.2■□□□□ 0.82
CSNK1E-215ENST00000612795 CCDC62Q6P9F0 684 aa20.2■□□□□ 0.82
CSNK1E-215ENST00000612795 KAT2BQ92831 832 aa20.2■□□□□ 0.82
CSNK1E-215ENST00000612795 ALG1Q9BT22 464 aa20.2■□□□□ 0.82
CSNK1E-215ENST00000612795 HDAC6Q9UBN7 1215 aa20.2■□□□□ 0.82
CSNK1E-215ENST00000612795 DGKDQ16760 1214 aa20.19■□□□□ 0.82
CSNK1E-215ENST00000612795 VPS53Q5VIR6 699 aa20.19■□□□□ 0.82
CSNK1E-215ENST00000612795 C17orf80Q9BSJ5 609 aa20.19■□□□□ 0.82
CSNK1E-215ENST00000612795 INSL6Q9Y581 213 aa20.19■□□□□ 0.82
CSNK1E-215ENST00000612795 ATG2AQ2TAZ0 1938 aa20.18■□□□□ 0.82
CSNK1E-215ENST00000612795 PSEN2P49810 448 aa20.18■□□□□ 0.82
CSNK1E-215ENST00000612795 PTK7Q13308 1070 aa20.18■□□□□ 0.82
CSNK1E-215ENST00000612795 PTPROQ16827 1216 aa20.18■□□□□ 0.82
CSNK1E-215ENST00000612795 PUS10Q3MIT2 529 aaKnown RBP20.18■□□□□ 0.82
CSNK1E-215ENST00000612795 C20orf194Q5TEA3 1177 aa20.18■□□□□ 0.82
CSNK1E-215ENST00000612795 MIER1Q8N108 512 aa20.18■□□□□ 0.82
CSNK1E-215ENST00000612795 CTNNA3Q9UI47 895 aa20.18■□□□□ 0.82
CSNK1E-215ENST00000612795 GRXCR2A6NFK2 248 aa20.17■□□□□ 0.82
CSNK1E-215ENST00000612795 AMHP03971 560 aa20.17■□□□□ 0.82
CSNK1E-215ENST00000612795 FGRP09769 529 aa20.17■□□□□ 0.82
CSNK1E-215ENST00000612795 MRE11P49959 708 aa20.17■□□□□ 0.82
CSNK1E-215ENST00000612795 MFSD10Q14728 455 aa20.17■□□□□ 0.82
CSNK1E-215ENST00000612795 STXBP2Q15833 593 aa20.17■□□□□ 0.82
CSNK1E-215ENST00000612795 TIGD5Q53EQ6 642 aa20.17■□□□□ 0.82
CSNK1E-215ENST00000612795 ZNF618Q5T7W0 954 aa20.17■□□□□ 0.82
CSNK1E-215ENST00000612795 MYOCDQ8IZQ8 938 aa20.17■□□□□ 0.82
CSNK1E-215ENST00000612795 NSUN6Q8TEA1 469 aaKnown RBP20.17■□□□□ 0.82
CSNK1E-215ENST00000612795 MRPL38Q96DV4 380 aaKnown RBP20.17■□□□□ 0.82
CSNK1E-215ENST00000612795 TCP11L1Q9NUJ3 509 aa20.17■□□□□ 0.82
CSNK1E-215ENST00000612795 RCAN3Q9UKA8 241 aa20.17■□□□□ 0.82
CSNK1E-215ENST00000612795 H3BQ06 376 aaPredicted RBP20.16■□□□□ 0.82
CSNK1E-215ENST00000612795 DCXO43602 365 aa20.16■□□□□ 0.82
CSNK1E-215ENST00000612795 LGR5O75473 907 aa20.16■□□□□ 0.82
CSNK1E-215ENST00000612795 ZNF286BP0CG31 522 aa20.16■□□□□ 0.82
CSNK1E-215ENST00000612795 KIAA0753Q2KHM9 967 aa20.16■□□□□ 0.82
CSNK1E-215ENST00000612795 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.16■□□□□ 0.82
CSNK1E-215ENST00000612795 EP400NLQ6ZTU2 488 aa20.16■□□□□ 0.82
CSNK1E-215ENST00000612795 DHX37Q8IY37 1157 aaKnown RBP20.16■□□□□ 0.82
CSNK1E-215ENST00000612795 RGS22Q8NE09 1264 aa20.16■□□□□ 0.82
CSNK1E-215ENST00000612795 OTUD7AQ8TE49 926 aaPredicted RBP20.16■□□□□ 0.82
CSNK1E-215ENST00000612795 FAM50BQ9Y247 325 aa20.16■□□□□ 0.82
CSNK1E-215ENST00000612795 EMSYQ7Z589 1322 aa20.16■□□□□ 0.82
CSNK1E-215ENST00000612795 MX1P20591 662 aa20.15■□□□□ 0.82
CSNK1E-215ENST00000612795 GPATCH4Q5T3I0 446 aaKnown RBP20.15■□□□□ 0.82
CSNK1E-215ENST00000612795 NEK9Q8TD19 979 aa20.15■□□□□ 0.82
CSNK1E-215ENST00000612795 SAMD11Q96NU1 681 aa20.15■□□□□ 0.82
CSNK1E-215ENST00000612795 TAAR1Q96RJ0 339 aa20.15■□□□□ 0.82
CSNK1E-215ENST00000612795 MRVI1Q9Y6F6 885 aa20.15■□□□□ 0.82
CSNK1E-215ENST00000612795 ABCB11O95342 1321 aa20.15■□□□□ 0.82
CSNK1E-215ENST00000612795 LAMA4Q16363 1823 aa20.15■□□□□ 0.82
CSNK1E-215ENST00000612795 F2P00734 622 aa20.14■□□□□ 0.81
CSNK1E-215ENST00000612795 GOLGA8HP0CJ92 632 aa20.14■□□□□ 0.81
CSNK1E-215ENST00000612795 SNHG28P0DPA3 235 aa20.14■□□□□ 0.81
CSNK1E-215ENST00000612795 MBTPS1Q14703 1052 aa20.14■□□□□ 0.81
CSNK1E-215ENST00000612795 ALX1Q15699 326 aa20.14■□□□□ 0.81
CSNK1E-215ENST00000612795 CDC37Q16543 378 aaPredicted RBP20.14■□□□□ 0.81
CSNK1E-215ENST00000612795 TRAF7Q6Q0C0 670 aa20.14■□□□□ 0.81
CSNK1E-215ENST00000612795 BANK1Q8NDB2 785 aa20.14■□□□□ 0.81
CSNK1E-215ENST00000612795 SYTL5Q8TDW5 730 aaPredicted RBP20.14■□□□□ 0.81
CSNK1E-215ENST00000612795 WNT8BQ93098 351 aa20.14■□□□□ 0.81
CSNK1E-215ENST00000612795 IWS1Q96ST2 819 aa20.14■□□□□ 0.81
CSNK1E-215ENST00000612795 RMDN3Q96TC7 470 aa20.14■□□□□ 0.81
CSNK1E-215ENST00000612795 TRIM71Q2Q1W2 868 aaKnown RBP20.13■□□□□ 0.81
CSNK1E-215ENST00000612795 EPC2Q52LR7 807 aa20.13■□□□□ 0.81
CSNK1E-215ENST00000612795 ARHGEF16Q5VV41 709 aa20.13■□□□□ 0.81
CSNK1E-215ENST00000612795 MCF2L2Q86YR7 1114 aa20.13■□□□□ 0.81
CSNK1E-215ENST00000612795 DBF4BQ8NFT6 615 aa20.13■□□□□ 0.81
CSNK1E-215ENST00000612795 PPTC7Q8NI37 304 aa20.13■□□□□ 0.81
CSNK1E-215ENST00000612795 TBC1D5Q92609 795 aa20.13■□□□□ 0.81
CSNK1E-215ENST00000612795 EMID1Q96A84 441 aaPredicted RBP20.13■□□□□ 0.81
CSNK1E-215ENST00000612795 TTC14Q96N46 770 aa20.13■□□□□ 0.81
CSNK1E-215ENST00000612795 YME1L1Q96TA2 773 aa20.13■□□□□ 0.81
CSNK1E-215ENST00000612795 MAF1Q9H063 256 aa20.13■□□□□ 0.81
CSNK1E-215ENST00000612795 CPVLQ9H3G5 476 aa20.13■□□□□ 0.81
CSNK1E-215ENST00000612795 COL20A1Q9P218 1284 aa20.13■□□□□ 0.81
CSNK1E-215ENST00000612795 DDX41Q9UJV9 622 aaKnown RBP20.13■□□□□ 0.81
CSNK1E-215ENST00000612795 RBAK-RBAKDNI3L0D1 243 aa20.12■□□□□ 0.81
CSNK1E-215ENST00000612795 FGAP02671 866 aa20.12■□□□□ 0.81
CSNK1E-215ENST00000612795 EIF2AK2P19525 551 aaKnown RBP20.12■□□□□ 0.81
CSNK1E-215ENST00000612795 HAND2P61296 217 aa20.12■□□□□ 0.81
CSNK1E-215ENST00000612795 HTRA4P83105 476 aaPredicted RBP20.12■□□□□ 0.81
CSNK1E-215ENST00000612795 ZNF200P98182 395 aaPredicted RBP20.12■□□□□ 0.81
CSNK1E-215ENST00000612795 NHLH1Q02575 133 aa20.12■□□□□ 0.81
CSNK1E-215ENST00000612795 LAMC2Q13753 1193 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms