RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 CXCL10P02778 98 aa27.49■■□□□ 1.99
MMP28-203ENST00000612672 SELPP16109 830 aa27.49■■□□□ 1.99
MMP28-203ENST00000612672 PDE1AP54750 535 aa27.49■■□□□ 1.99
MMP28-203ENST00000612672 RBL2Q08999 1139 aa27.49■■□□□ 1.99
MMP28-203ENST00000612672 MBTPS1Q14703 1052 aa27.49■■□□□ 1.99
MMP28-203ENST00000612672 MCMDC2Q4G0Z9 681 aa27.49■■□□□ 1.99
MMP28-203ENST00000612672 RGS22Q8NE09 1264 aa27.49■■□□□ 1.99
MMP28-203ENST00000612672 FAM86C2PA6NEL3 165 aa27.48■■□□□ 1.99
MMP28-203ENST00000612672 GH1P01241 217 aa27.48■■□□□ 1.99
MMP28-203ENST00000612672 CKBP12277 381 aa27.48■■□□□ 1.99
MMP28-203ENST00000612672 HOXD11P31277 338 aaPredicted RBP27.48■■□□□ 1.99
MMP28-203ENST00000612672 HIC1Q14526 733 aa27.48■■□□□ 1.99
MMP28-203ENST00000612672 CDC37Q16543 378 aaPredicted RBP27.48■■□□□ 1.99
MMP28-203ENST00000612672 TRIM71Q2Q1W2 868 aaKnown RBP27.48■■□□□ 1.99
MMP28-203ENST00000612672 TTC14Q96N46 770 aa27.48■■□□□ 1.99
MMP28-203ENST00000612672 MPHOSPH6Q99547 160 aaKnown RBP27.48■■□□□ 1.99
MMP28-203ENST00000612672 HDAC6Q9UBN7 1215 aa27.48■■□□□ 1.99
MMP28-203ENST00000612672 GTF2IRD1Q9UHL9 959 aa27.48■■□□□ 1.99
MMP28-203ENST00000612672 ANKRD45Q5TZF3 282 aa27.47■■□□□ 1.99
MMP28-203ENST00000612672 CNKSR3Q6P9H4 555 aa27.47■■□□□ 1.99
MMP28-203ENST00000612672 SUGCTQ9HAC7 445 aa27.47■■□□□ 1.99
MMP28-203ENST00000612672 PNMA2Q9UL42 364 aa27.47■■□□□ 1.99
MMP28-203ENST00000612672 C5orf42Q9H799 3197 aa27.47■■□□□ 1.99
MMP28-203ENST00000612672 CCDC171Q6TFL3 1326 aa27.46■■□□□ 1.99
MMP28-203ENST00000612672 ZNF286BP0CG31 522 aa27.46■■□□□ 1.99
MMP28-203ENST00000612672 ZNF200P98182 395 aaPredicted RBP27.46■■□□□ 1.99
MMP28-203ENST00000612672 CCDC155Q8N6L0 562 aa27.46■■□□□ 1.99
MMP28-203ENST00000612672 LINC01553A4QN01 128 aa27.45■■□□□ 1.98
MMP28-203ENST00000612672 GJB5O95377 273 aa27.45■■□□□ 1.98
MMP28-203ENST00000612672 PSEN2P49810 448 aa27.45■■□□□ 1.98
MMP28-203ENST00000612672 MFSD6Q6ZSS7 791 aa27.45■■□□□ 1.98
MMP28-203ENST00000612672 ALG1Q9BT22 464 aa27.45■■□□□ 1.98
MMP28-203ENST00000612672 DDX41Q9UJV9 622 aaKnown RBP27.45■■□□□ 1.98
MMP28-203ENST00000612672 WDFY4Q6ZS81 3184 aa27.45■■□□□ 1.98
MMP28-203ENST00000612672 ATG2AQ2TAZ0 1938 aa27.45■■□□□ 1.98
MMP28-203ENST00000612672 MUC6Q6W4X9 2439 aa27.45■■□□□ 1.98
MMP28-203ENST00000612672 GPATCH4Q5T3I0 446 aaKnown RBP27.44■■□□□ 1.98
MMP28-203ENST00000612672 FAM117BQ6P1L5 589 aa27.44■■□□□ 1.98
MMP28-203ENST00000612672 ADGRF4Q8IZF3 695 aa27.44■■□□□ 1.98
MMP28-203ENST00000612672 ZBED2Q9BTP6 218 aa27.44■■□□□ 1.98
MMP28-203ENST00000612672 ABCB11O95342 1321 aa27.43■■□□□ 1.98
MMP28-203ENST00000612672 HAS3O00219 553 aa27.43■■□□□ 1.98
MMP28-203ENST00000612672 OPLAHO14841 1288 aa27.43■■□□□ 1.98
MMP28-203ENST00000612672 EIF2AK2P19525 551 aaKnown RBP27.43■■□□□ 1.98
MMP28-203ENST00000612672 ERVK-21P61565 698 aa27.43■■□□□ 1.98
MMP28-203ENST00000612672 QRICH1Q2TAL8 776 aa27.43■■□□□ 1.98
MMP28-203ENST00000612672 TMEM31Q5JXX7 168 aa27.43■■□□□ 1.98
MMP28-203ENST00000612672 ZNF618Q5T7W0 954 aa27.43■■□□□ 1.98
MMP28-203ENST00000612672 PNMA1Q8ND90 353 aa27.43■■□□□ 1.98
MMP28-203ENST00000612672 NSUN6Q8TEA1 469 aaKnown RBP27.43■■□□□ 1.98
MMP28-203ENST00000612672 RMDN3Q96TC7 470 aa27.43■■□□□ 1.98
MMP28-203ENST00000612672 B4DLN1 442 aa27.42■■□□□ 1.98
MMP28-203ENST00000612672 F2P00734 622 aa27.42■■□□□ 1.98
MMP28-203ENST00000612672 CASTP20810 708 aaKnown RBP27.42■■□□□ 1.98
MMP28-203ENST00000612672 MRPL12P52815 198 aaKnown RBP27.42■■□□□ 1.98
MMP28-203ENST00000612672 MKRN4PQ13434 485 aaPredicted RBP27.42■■□□□ 1.98
MMP28-203ENST00000612672 LIN28BQ6ZN17 250 aaKnown RBP eCLIP27.42■■□□□ 1.98
MMP28-203ENST00000612672 RAD9AQ99638 391 aa27.42■■□□□ 1.98
MMP28-203ENST00000612672 LMCD1Q9NZU5 365 aa27.42■■□□□ 1.98
MMP28-203ENST00000612672 TRIOO75962 3097 aa27.42■■□□□ 1.98
MMP28-203ENST00000612672 NLRC5Q86WI3 1866 aa27.41■■□□□ 1.98
MMP28-203ENST00000612672 DOCK5Q9H7D0 1870 aa27.41■■□□□ 1.98
MMP28-203ENST00000612672 SORBS3O60504 671 aa27.41■■□□□ 1.98
MMP28-203ENST00000612672 RGS20O76081 388 aa27.41■■□□□ 1.98
MMP28-203ENST00000612672 MFSD10Q14728 455 aa27.41■■□□□ 1.98
MMP28-203ENST00000612672 STXBP2Q15833 593 aa27.41■■□□□ 1.98
MMP28-203ENST00000612672 DGKDQ16760 1214 aa27.41■■□□□ 1.98
MMP28-203ENST00000612672 EMID1Q96A84 441 aaPredicted RBP27.41■■□□□ 1.98
MMP28-203ENST00000612672 TGS1Q96RS0 853 aaKnown RBP27.41■■□□□ 1.98
MMP28-203ENST00000612672 UBE2ZQ9H832 354 aaPredicted RBP27.41■■□□□ 1.98
MMP28-203ENST00000612672 KIAA0753Q2KHM9 967 aa27.4■■□□□ 1.98
MMP28-203ENST00000612672 DGKHQ86XP1 1220 aa27.4■■□□□ 1.98
MMP28-203ENST00000612672 C7orf31Q8N865 590 aa27.4■■□□□ 1.98
MMP28-203ENST00000612672 C17orf80Q9BSJ5 609 aa27.4■■□□□ 1.98
MMP28-203ENST00000612672 JMJD4Q9H9V9 463 aa27.4■■□□□ 1.98
MMP28-203ENST00000612672 PXMP2Q9NR77 195 aa27.4■■□□□ 1.98
MMP28-203ENST00000612672 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP27.39■■□□□ 1.98
MMP28-203ENST00000612672 ABHD14A-ACY1A0A1B0GW23 586 aa27.39■■□□□ 1.98
MMP28-203ENST00000612672 KDM4AO75164 1064 aa27.39■■□□□ 1.98
MMP28-203ENST00000612672 PCP11498 1178 aaKnown RBP27.39■■□□□ 1.98
MMP28-203ENST00000612672 PTK7Q13308 1070 aa27.39■■□□□ 1.98
MMP28-203ENST00000612672 ESR2Q92731 530 aa27.39■■□□□ 1.98
MMP28-203ENST00000612672 IWS1Q96ST2 819 aa27.39■■□□□ 1.98
MMP28-203ENST00000612672 OSBPL7Q9BZF2 842 aa27.39■■□□□ 1.98
MMP28-203ENST00000612672 PIEZO1Q92508 2521 aa27.39■■□□□ 1.97
MMP28-203ENST00000612672 GPR37L1O60883 481 aa27.38■■□□□ 1.97
MMP28-203ENST00000612672 HOXD8P13378 290 aaPredicted RBP27.38■■□□□ 1.97
MMP28-203ENST00000612672 ENAHQ8N8S7 591 aaPredicted RBP27.38■■□□□ 1.97
MMP28-203ENST00000612672 PPTC7Q8NI37 304 aa27.38■■□□□ 1.97
MMP28-203ENST00000612672 GADD45GIP1Q8TAE8 222 aaPredicted RBP27.38■■□□□ 1.97
MMP28-203ENST00000612672 HCN4Q9Y3Q4 1203 aa27.38■■□□□ 1.97
MMP28-203ENST00000612672 MRVI1Q9Y6F6 885 aa27.38■■□□□ 1.97
MMP28-203ENST00000612672 PI4K2BG5E9Z4 385 aa27.37■■□□□ 1.97
MMP28-203ENST00000612672 PPP1R11O60927 126 aaPredicted RBP27.37■■□□□ 1.97
MMP28-203ENST00000612672 NR3C2P08235 984 aa27.37■■□□□ 1.97
MMP28-203ENST00000612672 IL9P15248 144 aa27.37■■□□□ 1.97
MMP28-203ENST00000612672 ARHGEF16Q5VV41 709 aa27.37■■□□□ 1.97
MMP28-203ENST00000612672 IL31RAQ8NI17 732 aa27.37■■□□□ 1.97
MMP28-203ENST00000612672 ANKS1AQ92625 1134 aa27.37■■□□□ 1.97
MMP28-203ENST00000612672 VAT1LQ9HCJ6 419 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms