RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 RBM12Q9NTZ6 932 aaKnown RBP15.58■□□□□ 0.08
COL6A1-207ENST00000612273 TIAM2Q8IVF5 1701 aa15.57■□□□□ 0.08
COL6A1-207ENST00000612273 E9PMD0 336 aa15.57■□□□□ 0.08
COL6A1-207ENST00000612273 KRT14P02533 472 aa15.57■□□□□ 0.08
COL6A1-207ENST00000612273 KRT18P05783 430 aaKnown RBP15.57■□□□□ 0.08
COL6A1-207ENST00000612273 KRT79Q5XKE5 535 aa15.57■□□□□ 0.08
COL6A1-207ENST00000612273 FAM76AQ8TAV0 307 aa15.57■□□□□ 0.08
COL6A1-207ENST00000612273 WDR66Q8TBY9 1149 aa15.57■□□□□ 0.08
COL6A1-207ENST00000612273 ARHGEF1Q92888 912 aaKnown RBP15.57■□□□□ 0.08
COL6A1-207ENST00000612273 MED4Q9NPJ6 270 aa15.57■□□□□ 0.08
COL6A1-207ENST00000612273 ADAMTS1Q9UHI8 967 aa15.57■□□□□ 0.08
COL6A1-207ENST00000612273 DISP2A7MBM2 1401 aa15.57■□□□□ 0.08
COL6A1-207ENST00000612273 AGPSO00116 658 aa15.57■□□□□ 0.08
COL6A1-207ENST00000612273 TAL1P17542 331 aaPredicted RBP15.57■□□□□ 0.08
COL6A1-207ENST00000612273 KLHL7Q8IXQ5 586 aa15.57■□□□□ 0.08
COL6A1-207ENST00000612273 TRIM58Q8NG06 486 aa15.57■□□□□ 0.08
COL6A1-207ENST00000612273 PNMA5Q96PV4 448 aa15.57■□□□□ 0.08
COL6A1-207ENST00000612273 MKRN1Q9UHC7 482 aaKnown RBP15.57■□□□□ 0.08
COL6A1-207ENST00000612273 CACNA1SQ13698 1873 aa15.57■□□□□ 0.08
COL6A1-207ENST00000612273 PAFAH1B1P43034 410 aa15.56■□□□□ 0.08
COL6A1-207ENST00000612273 EHHADHQ08426 723 aa15.56■□□□□ 0.08
COL6A1-207ENST00000612273 DPP8Q6V1X1 898 aaPredicted RBP15.56■□□□□ 0.08
COL6A1-207ENST00000612273 TSEN2Q8NCE0 465 aaKnown RBP15.56■□□□□ 0.08
COL6A1-207ENST00000612273 ARL8AQ96BM9 186 aa15.56■□□□□ 0.08
COL6A1-207ENST00000612273 C8orf37Q96NL8 207 aa15.56■□□□□ 0.08
COL6A1-207ENST00000612273 RFC4P35249 363 aa15.56■□□□□ 0.08
COL6A1-207ENST00000612273 C8orf74Q6P047 294 aa15.56■□□□□ 0.08
COL6A1-207ENST00000612273 SLC30A10Q6XR72 485 aa15.56■□□□□ 0.08
COL6A1-207ENST00000612273 CCDC170Q8IYT3 715 aa15.56■□□□□ 0.08
COL6A1-207ENST00000612273 TBC1D5Q92609 795 aa15.56■□□□□ 0.08
COL6A1-207ENST00000612273 ALS2CR12Q96Q35 445 aa15.56■□□□□ 0.08
COL6A1-207ENST00000612273 PACSIN1Q9BY11 444 aa15.56■□□□□ 0.08
COL6A1-207ENST00000612273 SH2D4AQ9H788 454 aa15.56■□□□□ 0.08
COL6A1-207ENST00000612273 NFU1Q9UMS0 254 aa15.56■□□□□ 0.08
COL6A1-207ENST00000612273 PLAGL2Q9UPG8 496 aa15.56■□□□□ 0.08
COL6A1-207ENST00000612273 RTCBQ9Y3I0 505 aaKnown RBP15.56■□□□□ 0.08
COL6A1-207ENST00000612273 JRKLQ9Y4A0 524 aa15.56■□□□□ 0.08
COL6A1-207ENST00000612273 USP17L15C9J2P7 530 aa15.56■□□□□ 0.08
COL6A1-207ENST00000612273 USP17L13C9JLJ4 530 aa15.56■□□□□ 0.08
COL6A1-207ENST00000612273 USP17L11C9JVI0 530 aa15.56■□□□□ 0.08
COL6A1-207ENST00000612273 USP17L18D6R9N7 530 aa15.56■□□□□ 0.08
COL6A1-207ENST00000612273 USP17L22D6RA61 530 aa15.56■□□□□ 0.08
COL6A1-207ENST00000612273 USP17L17D6RBQ6 530 aa15.56■□□□□ 0.08
COL6A1-207ENST00000612273 USP17L19D6RCP7 530 aa15.56■□□□□ 0.08
COL6A1-207ENST00000612273 USP17L20D6RJB6 530 aa15.56■□□□□ 0.08
COL6A1-207ENST00000612273 MEIS1O00470 390 aa15.56■□□□□ 0.08
COL6A1-207ENST00000612273 IVLP07476 585 aa15.56■□□□□ 0.08
COL6A1-207ENST00000612273 STAT3P40763 770 aa15.56■□□□□ 0.08
COL6A1-207ENST00000612273 EPS15P42566 896 aa15.56■□□□□ 0.08
COL6A1-207ENST00000612273 SCNN1DP51172 638 aa15.56■□□□□ 0.08
COL6A1-207ENST00000612273 USP17L24Q0WX57 530 aa15.56■□□□□ 0.08
COL6A1-207ENST00000612273 SF3A3Q12874 501 aaKnown RBP eCLIP15.56■□□□□ 0.08
COL6A1-207ENST00000612273 TMEM266Q2M3C6 531 aa15.56■□□□□ 0.08
COL6A1-207ENST00000612273 USP17L6PQ6QN14 398 aa15.56■□□□□ 0.08
COL6A1-207ENST00000612273 C7orf25Q9BPX7 421 aa15.56■□□□□ 0.08
COL6A1-207ENST00000612273 LSM14BQ9BX40 385 aaKnown RBP15.56■□□□□ 0.08
COL6A1-207ENST00000612273 PSD3Q9NYI0 1048 aa15.56■□□□□ 0.08
COL6A1-207ENST00000612273 CCNL1Q9UK58 526 aaPredicted RBP15.56■□□□□ 0.08
COL6A1-207ENST00000612273 GUCY2DQ02846 1103 aa15.55■□□□□ 0.08
COL6A1-207ENST00000612273 HERC4Q5GLZ8 1057 aaPredicted RBP15.55■□□□□ 0.08
COL6A1-207ENST00000612273 FAM133AQ8N9E0 248 aa15.55■□□□□ 0.08
COL6A1-207ENST00000612273 NYXQ9GZU5 481 aa15.55■□□□□ 0.08
COL6A1-207ENST00000612273 GTF2IP78347 998 aa15.55■□□□□ 0.08
COL6A1-207ENST00000612273 NOC3LQ8WTT2 800 aaKnown RBP15.55■□□□□ 0.08
COL6A1-207ENST00000612273 KIAA1024Q9UPX6 916 aa15.55■□□□□ 0.08
COL6A1-207ENST00000612273 ACTN1P12814 892 aa15.55■□□□□ 0.08
COL6A1-207ENST00000612273 TM4SF1P30408 202 aa15.55■□□□□ 0.08
COL6A1-207ENST00000612273 CARSP49589 748 aaKnown RBP15.55■□□□□ 0.08
COL6A1-207ENST00000612273 LIG3P49916 1009 aa15.55■□□□□ 0.08
COL6A1-207ENST00000612273 ADCY7P51828 1080 aa15.55■□□□□ 0.08
COL6A1-207ENST00000612273 PDCLQ13371 301 aa15.55■□□□□ 0.08
COL6A1-207ENST00000612273 MAN2A1Q16706 1144 aa15.55■□□□□ 0.08
COL6A1-207ENST00000612273 TCERG1LQ5VWI1 586 aa15.55■□□□□ 0.08
COL6A1-207ENST00000612273 BCAS4Q8TDM0 211 aa15.55■□□□□ 0.08
COL6A1-207ENST00000612273 EPB41L5Q9HCM4 733 aa15.55■□□□□ 0.08
COL6A1-207ENST00000612273 SIK3Q9Y2K2 1263 aa15.55■□□□□ 0.08
COL6A1-207ENST00000612273 PRPF6O94906 941 aaKnown RBP15.54■□□□□ 0.08
COL6A1-207ENST00000612273 FAM153BP0C7A2 387 aa15.54■□□□□ 0.08
COL6A1-207ENST00000612273 AKR1B1P15121 316 aa15.54■□□□□ 0.08
COL6A1-207ENST00000612273 NOP2P46087 812 aaKnown RBP15.54■□□□□ 0.08
COL6A1-207ENST00000612273 GNGT1P63211 74 aa15.54■□□□□ 0.08
COL6A1-207ENST00000612273 GPSM2P81274 684 aa15.54■□□□□ 0.08
COL6A1-207ENST00000612273 SHROOM1Q2M3G4 852 aaPredicted RBP15.54■□□□□ 0.08
COL6A1-207ENST00000612273 FAM153CQ494X1 144 aa15.54■□□□□ 0.08
COL6A1-207ENST00000612273 ZNF804AQ7Z570 1209 aa15.54■□□□□ 0.08
COL6A1-207ENST00000612273 AK8Q96MA6 479 aa15.54■□□□□ 0.08
COL6A1-207ENST00000612273 ERGIC2Q96RQ1 377 aa15.54■□□□□ 0.08
COL6A1-207ENST00000612273 KRT12Q99456 494 aa15.54■□□□□ 0.08
COL6A1-207ENST00000612273 BCAS3Q9H6U6 928 aa15.54■□□□□ 0.08
COL6A1-207ENST00000612273 FAM153AQ9UHL3 310 aa15.54■□□□□ 0.08
COL6A1-207ENST00000612273 PALMO75781 387 aa15.54■□□□□ 0.08
COL6A1-207ENST00000612273 CACNB3P54284 484 aa15.54■□□□□ 0.08
COL6A1-207ENST00000612273 TUBB4BP68371 445 aa15.54■□□□□ 0.08
COL6A1-207ENST00000612273 CENPPQ6IPU0 288 aa15.54■□□□□ 0.08
COL6A1-207ENST00000612273 MICALL1Q8N3F8 863 aa15.54■□□□□ 0.08
COL6A1-207ENST00000612273 RPGRQ92834 1020 aaKnown RBP15.54■□□□□ 0.08
COL6A1-207ENST00000612273 NARFQ9UHQ1 456 aa15.54■□□□□ 0.08
COL6A1-207ENST00000612273 POTEB3A0JP26 581 aa15.53■□□□□ 0.08
COL6A1-207ENST00000612273 POTECB2RU33 542 aa15.53■□□□□ 0.08
COL6A1-207ENST00000612273 HLTFQ14527 1009 aaKnown RBP eCLIP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms