RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 CSF1RP07333 972 aa13.62□□□□□ -0.23
CDH1-212ENST00000611625 FERP16591 822 aa13.62□□□□□ -0.23
CDH1-212ENST00000611625 SLC16A2P36021 539 aa13.62□□□□□ -0.23
CDH1-212ENST00000611625 SEPT2Q15019 361 aa13.62□□□□□ -0.23
CDH1-212ENST00000611625 DPH6Q7L8W6 267 aa13.62□□□□□ -0.23
CDH1-212ENST00000611625 MIER3Q7Z3K6 550 aa13.62□□□□□ -0.23
CDH1-212ENST00000611625 KIAA0825Q8IV33 1275 aa13.62□□□□□ -0.23
CDH1-212ENST00000611625 IWS1Q96ST2 819 aa13.62□□□□□ -0.23
CDH1-212ENST00000611625 LARSQ9P2J5 1176 aaKnown RBP13.62□□□□□ -0.23
CDH1-212ENST00000611625 DIP2BQ9P265 1576 aa13.61□□□□□ -0.23
CDH1-212ENST00000611625 FAM205CA6NFA0 338 aa13.61□□□□□ -0.23
CDH1-212ENST00000611625 HGSO14964 777 aaPredicted RBP13.61□□□□□ -0.23
CDH1-212ENST00000611625 DKC1O60832 514 aaKnown RBP eCLIP13.61□□□□□ -0.23
CDH1-212ENST00000611625 SENP2Q9HC62 589 aa13.61□□□□□ -0.23
CDH1-212ENST00000611625 EMILIN3Q9NT22 766 aa13.61□□□□□ -0.23
CDH1-212ENST00000611625 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.61□□□□□ -0.23
CDH1-212ENST00000611625 PGRMC1O00264 195 aaKnown RBP13.61□□□□□ -0.23
CDH1-212ENST00000611625 SLC7A5Q01650 507 aa13.61□□□□□ -0.23
CDH1-212ENST00000611625 GKAP1Q5VSY0 366 aaPredicted RBP13.61□□□□□ -0.23
CDH1-212ENST00000611625 UNC13DQ70J99 1090 aa13.61□□□□□ -0.23
CDH1-212ENST00000611625 KCTD1Q719H9 257 aa13.61□□□□□ -0.23
CDH1-212ENST00000611625 FEZ2Q9UHY8 353 aaPredicted RBP13.61□□□□□ -0.23
CDH1-212ENST00000611625 USTQ9Y2C2 406 aa13.61□□□□□ -0.23
CDH1-212ENST00000611625 N4BP1O75113 896 aaKnown RBP13.61□□□□□ -0.23
CDH1-212ENST00000611625 DOK7Q18PE1 504 aa13.61□□□□□ -0.23
CDH1-212ENST00000611625 NSMFQ6X4W1 530 aa13.61□□□□□ -0.23
CDH1-212ENST00000611625 MAIP1Q8WWC4 291 aa13.61□□□□□ -0.23
CDH1-212ENST00000611625 TMEM47Q9BQJ4 181 aa13.61□□□□□ -0.23
CDH1-212ENST00000611625 K7ENM7 598 aa13.61□□□□□ -0.23
CDH1-212ENST00000611625 EMBQ6PCB8 327 aa13.61□□□□□ -0.23
CDH1-212ENST00000611625 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.61□□□□□ -0.23
CDH1-212ENST00000611625 MRRFQ96E11 262 aaKnown RBP13.61□□□□□ -0.23
CDH1-212ENST00000611625 ZNF512BQ96KM6 892 aaPredicted RBP13.61□□□□□ -0.23
CDH1-212ENST00000611625 AGTPBP1Q9UPW5 1226 aa13.61□□□□□ -0.23
CDH1-212ENST00000611625 ALDH1B1P30837 517 aa13.6□□□□□ -0.23
CDH1-212ENST00000611625 STRN3Q13033 797 aa13.6□□□□□ -0.23
CDH1-212ENST00000611625 UBE2SQ16763 222 aa13.6□□□□□ -0.23
CDH1-212ENST00000611625 USP49Q70CQ1 688 aa13.6□□□□□ -0.23
CDH1-212ENST00000611625 CPVLQ9H3G5 476 aa13.6□□□□□ -0.23
CDH1-212ENST00000611625 PP2D1A8MPX8 630 aa13.6□□□□□ -0.23
CDH1-212ENST00000611625 LMNB1P20700 586 aa13.6□□□□□ -0.23
CDH1-212ENST00000611625 TC2NQ8N9U0 490 aa13.6□□□□□ -0.23
CDH1-212ENST00000611625 SMC6Q96SB8 1091 aa13.6□□□□□ -0.23
CDH1-212ENST00000611625 HOMER3Q9NSC5 361 aa13.6□□□□□ -0.23
CDH1-212ENST00000611625 PLA2G4BP0C869 781 aa13.6□□□□□ -0.23
CDH1-212ENST00000611625 POLR2MP0CAP2 368 aa13.6□□□□□ -0.23
CDH1-212ENST00000611625 NAA25Q14CX7 972 aa13.6□□□□□ -0.23
CDH1-212ENST00000611625 ODR4Q5SWX8 454 aa13.6□□□□□ -0.23
CDH1-212ENST00000611625 ALS2CLQ60I27 953 aa13.6□□□□□ -0.23
CDH1-212ENST00000611625 SH3RF3Q8TEJ3 882 aaPredicted RBP13.6□□□□□ -0.23
CDH1-212ENST00000611625 STIM2Q9P246 746 aa13.6□□□□□ -0.23
CDH1-212ENST00000611625 C1orf167Q5SNV9 1468 aa13.6□□□□□ -0.23
CDH1-212ENST00000611625 UAP1Q16222 522 aaPredicted RBP13.59□□□□□ -0.23
CDH1-212ENST00000611625 VSIG1Q86XK7 387 aa13.59□□□□□ -0.23
CDH1-212ENST00000611625 EFCAB13Q8IY85 973 aa13.59□□□□□ -0.23
CDH1-212ENST00000611625 FAM186BQ8IYM0 893 aa13.59□□□□□ -0.23
CDH1-212ENST00000611625 CCDC63Q8NA47 563 aa13.59□□□□□ -0.23
CDH1-212ENST00000611625 MGARPQ8TDB4 240 aa13.59□□□□□ -0.23
CDH1-212ENST00000611625 SRP68Q9UHB9 627 aaKnown RBP13.59□□□□□ -0.23
CDH1-212ENST00000611625 ADAMTS1Q9UHI8 967 aa13.59□□□□□ -0.23
CDH1-212ENST00000611625 A0A1B0GUA9 196 aa13.59□□□□□ -0.23
CDH1-212ENST00000611625 UHMK1Q8TAS1 419 aaKnown RBP13.59□□□□□ -0.23
CDH1-212ENST00000611625 CELF1Q92879 486 aaKnown RBP13.59□□□□□ -0.23
CDH1-212ENST00000611625 ST7Q9NRC1 585 aa13.59□□□□□ -0.23
CDH1-212ENST00000611625 ORC4O43929 436 aa13.59□□□□□ -0.23
CDH1-212ENST00000611625 MRPS25P82663 173 aaKnown RBP13.59□□□□□ -0.23
CDH1-212ENST00000611625 NNTQ13423 1086 aa13.59□□□□□ -0.23
CDH1-212ENST00000611625 TXNRD1Q16881 649 aa13.59□□□□□ -0.23
CDH1-212ENST00000611625 TMED8Q6PL24 325 aaPredicted RBP13.59□□□□□ -0.23
CDH1-212ENST00000611625 ANKRD42Q8N9B4 389 aa13.59□□□□□ -0.23
CDH1-212ENST00000611625 JDP2Q8WYK2 163 aa13.59□□□□□ -0.23
CDH1-212ENST00000611625 EPB41L4AQ9HCS5 686 aaPredicted RBP13.59□□□□□ -0.23
CDH1-212ENST00000611625 ADD3Q9UEY8 706 aaKnown RBP13.59□□□□□ -0.23
CDH1-212ENST00000611625 LIMA1Q9UHB6 759 aaKnown RBP13.59□□□□□ -0.23
CDH1-212ENST00000611625 A0A1W2PQC6 194 aa13.59□□□□□ -0.23
CDH1-212ENST00000611625 ATP11AP98196 1134 aa13.59□□□□□ -0.23
CDH1-212ENST00000611625 PPM1KQ8N3J5 372 aa13.59□□□□□ -0.23
CDH1-212ENST00000611625 SLC44A5Q8NCS7 719 aa13.59□□□□□ -0.23
CDH1-212ENST00000611625 FAM114A2Q9NRY5 505 aa13.59□□□□□ -0.23
CDH1-212ENST00000611625 BAIAP2L1Q9UHR4 511 aa13.59□□□□□ -0.23
CDH1-212ENST00000611625 MRPL11Q9Y3B7 192 aaKnown RBP13.59□□□□□ -0.23
CDH1-212ENST00000611625 GRM4Q14833 912 aa13.58□□□□□ -0.23
CDH1-212ENST00000611625 NR1I3Q14994 352 aa13.58□□□□□ -0.23
CDH1-212ENST00000611625 DCUN1D2Q6PH85 259 aa13.58□□□□□ -0.23
CDH1-212ENST00000611625 PHF20Q9BVI0 1012 aa13.58□□□□□ -0.23
CDH1-212ENST00000611625 HDAC6Q9UBN7 1215 aa13.58□□□□□ -0.23
CDH1-212ENST00000611625 GAP43P17677 238 aa13.58□□□□□ -0.24
CDH1-212ENST00000611625 PSMC2P35998 433 aaKnown RBP13.58□□□□□ -0.24
CDH1-212ENST00000611625 SRBD1Q8N5C6 995 aaKnown RBP13.58□□□□□ -0.24
CDH1-212ENST00000611625 PBKQ96KB5 322 aa13.58□□□□□ -0.24
CDH1-212ENST00000611625 TSNARE1Q96NA8 513 aa13.58□□□□□ -0.24
CDH1-212ENST00000611625 SPATA31D1Q6ZQQ2 1576 aa13.58□□□□□ -0.24
CDH1-212ENST00000611625 A0A087WUV0 522 aaPredicted RBP13.58□□□□□ -0.24
CDH1-212ENST00000611625 POTEMA6NI47 508 aa13.58□□□□□ -0.24
CDH1-212ENST00000611625 H0YIN7 160 aa13.58□□□□□ -0.24
CDH1-212ENST00000611625 MEIS1O00470 390 aa13.58□□□□□ -0.24
CDH1-212ENST00000611625 CLIC2O15247 247 aa13.58□□□□□ -0.24
CDH1-212ENST00000611625 BUB1BO60566 1050 aaPredicted RBP13.58□□□□□ -0.24
CDH1-212ENST00000611625 STAMBPO95630 424 aa13.58□□□□□ -0.24
CDH1-212ENST00000611625 MYL7Q01449 175 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms