RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 FANCBQ8NB91 859 aa10.02□□□□□ -0.81
SNCA-212ENST00000611107 OR6J1Q8NGC5 347 aa10.02□□□□□ -0.81
SNCA-212ENST00000611107 TBC1D32Q96NH3 1257 aa10.02□□□□□ -0.81
SNCA-212ENST00000611107 CTAGE1Q96RT6 745 aa10.02□□□□□ -0.81
SNCA-212ENST00000611107 C22orf23Q9BZE7 217 aa10.02□□□□□ -0.81
SNCA-212ENST00000611107 UBE2OQ9C0C9 1292 aaKnown RBP10.02□□□□□ -0.81
SNCA-212ENST00000611107 TRPV6Q9H1D0 765 aa10.02□□□□□ -0.81
SNCA-212ENST00000611107 TBX21Q9UL17 535 aa10.02□□□□□ -0.81
SNCA-212ENST00000611107 SLC12A7Q9Y666 1083 aa10.02□□□□□ -0.81
SNCA-212ENST00000611107 CYP46A1Q9Y6A2 500 aa10.02□□□□□ -0.81
SNCA-212ENST00000611107 MYO9BQ13459 2157 aa10.02□□□□□ -0.81
SNCA-212ENST00000611107 GBF1Q92538 1859 aa10.02□□□□□ -0.81
SNCA-212ENST00000611107 GOLGA8BA8MQT2 603 aa10.01□□□□□ -0.81
SNCA-212ENST00000611107 MYL3P08590 195 aa10.01□□□□□ -0.81
SNCA-212ENST00000611107 CLTBP09497 229 aa10.01□□□□□ -0.81
SNCA-212ENST00000611107 TXNP10599 105 aaKnown RBP10.01□□□□□ -0.81
SNCA-212ENST00000611107 MYCLP12524 364 aaPredicted RBP10.01□□□□□ -0.81
SNCA-212ENST00000611107 ARHGEF16Q5VV41 709 aa10.01□□□□□ -0.81
SNCA-212ENST00000611107 Q7L0L9 218 aa10.01□□□□□ -0.81
SNCA-212ENST00000611107 NSUN6Q8TEA1 469 aaKnown RBP10.01□□□□□ -0.81
SNCA-212ENST00000611107 AFG1LQ8WV93 481 aa10.01□□□□□ -0.81
SNCA-212ENST00000611107 KAT2BQ92831 832 aa10.01□□□□□ -0.81
SNCA-212ENST00000611107 MAP3K14Q99558 947 aa10.01□□□□□ -0.81
SNCA-212ENST00000611107 AP5M1Q9H0R1 490 aa10.01□□□□□ -0.81
SNCA-212ENST00000611107 DDX41Q9UJV9 622 aaKnown RBP10.01□□□□□ -0.81
SNCA-212ENST00000611107 Q9Y3F1 56 aa10.01□□□□□ -0.81
SNCA-212ENST00000611107 ELP1O95163 1332 aa10.01□□□□□ -0.81
SNCA-212ENST00000611107 FRMPD4Q14CM0 1322 aa10.01□□□□□ -0.81
SNCA-212ENST00000611107 PTPRSQ13332 1948 aa10□□□□□ -0.81
SNCA-212ENST00000611107 A0A0U1RQG5 324 aaPredicted RBP10□□□□□ -0.81
SNCA-212ENST00000611107 GOLGA8AA7E2F4 631 aa10□□□□□ -0.81
SNCA-212ENST00000611107 ZBTB43O43298 467 aa10□□□□□ -0.81
SNCA-212ENST00000611107 B4GALT4O60513 344 aa10□□□□□ -0.81
SNCA-212ENST00000611107 CYP2C18P33260 490 aa10□□□□□ -0.81
SNCA-212ENST00000611107 ADD1P35611 737 aaKnown RBP10□□□□□ -0.81
SNCA-212ENST00000611107 RCAN1P53805 252 aa10□□□□□ -0.81
SNCA-212ENST00000611107 EVCP57679 992 aa10□□□□□ -0.81
SNCA-212ENST00000611107 FGD1P98174 961 aa10□□□□□ -0.81
SNCA-212ENST00000611107 ITGA7Q13683 1181 aa10□□□□□ -0.81
SNCA-212ENST00000611107 PPP2R5BQ15173 497 aa10□□□□□ -0.81
SNCA-212ENST00000611107 NBPF20Q3BBV1 942 aa10□□□□□ -0.81
SNCA-212ENST00000611107 WWC2Q6AWC2 1192 aa10□□□□□ -0.81
SNCA-212ENST00000611107 FAM109BQ6ICB4 259 aaPredicted RBP10□□□□□ -0.81
SNCA-212ENST00000611107 VSIG10LQ86VR7 867 aa10□□□□□ -0.81
SNCA-212ENST00000611107 MCF2L2Q86YR7 1114 aa10□□□□□ -0.81
SNCA-212ENST00000611107 TDHQ8IZJ6 230 aa10□□□□□ -0.81
SNCA-212ENST00000611107 TMTC2Q8N394 836 aa10□□□□□ -0.81
SNCA-212ENST00000611107 PCSK9Q8NBP7 692 aaKnown RBP10□□□□□ -0.81
SNCA-212ENST00000611107 CTCFLQ8NI51 663 aaPredicted RBP10□□□□□ -0.81
SNCA-212ENST00000611107 SCFD2Q8WU76 684 aa10□□□□□ -0.81
SNCA-212ENST00000611107 VTI1AQ96AJ9 217 aa10□□□□□ -0.81
SNCA-212ENST00000611107 PGBD1Q96JS3 809 aa10□□□□□ -0.81
SNCA-212ENST00000611107 GLT1D1Q96MS3 346 aa10□□□□□ -0.81
SNCA-212ENST00000611107 PPP1R12CQ9BZL4 782 aa10□□□□□ -0.81
SNCA-212ENST00000611107 PDRG1Q9NUG6 133 aa10□□□□□ -0.81
SNCA-212ENST00000611107 TRMT13Q9NUP7 481 aaKnown RBP10□□□□□ -0.81
SNCA-212ENST00000611107 TMEM39AQ9NV64 488 aa10□□□□□ -0.81
SNCA-212ENST00000611107 RTEL1Q9NZ71 1219 aa10□□□□□ -0.81
SNCA-212ENST00000611107 LOC102724159A0A0B4J2E5 919 aa9.99□□□□□ -0.81
SNCA-212ENST00000611107 A6NJR5 290 aa9.99□□□□□ -0.81
SNCA-212ENST00000611107 GCOM1H8Y6P7 765 aaPredicted RBP9.99□□□□□ -0.81
SNCA-212ENST00000611107 LARGE1O95461 756 aa9.99□□□□□ -0.81
SNCA-212ENST00000611107 MMP3P08254 477 aa9.99□□□□□ -0.81
SNCA-212ENST00000611107 POLR2MP0CAP2 368 aa9.99□□□□□ -0.81
SNCA-212ENST00000611107 CALM1P0DP23 149 aa9.99□□□□□ -0.81
SNCA-212ENST00000611107 CALM2P0DP24 149 aa9.99□□□□□ -0.81
SNCA-212ENST00000611107 CALM3P0DP25 149 aa9.99□□□□□ -0.81
SNCA-212ENST00000611107 CYP2C9P11712 490 aa9.99□□□□□ -0.81
SNCA-212ENST00000611107 SMARCA1P28370 1054 aa9.99□□□□□ -0.81
SNCA-212ENST00000611107 KIF5BP33176 963 aa9.99□□□□□ -0.81
SNCA-212ENST00000611107 AK2P54819 239 aa9.99□□□□□ -0.81
SNCA-212ENST00000611107 PWP2Q15269 919 aaKnown RBP9.99□□□□□ -0.81
SNCA-212ENST00000611107 STXBP2Q15833 593 aa9.99□□□□□ -0.81
SNCA-212ENST00000611107 PKN1Q16512 942 aa9.99□□□□□ -0.81
SNCA-212ENST00000611107 RTN1Q16799 776 aa9.99□□□□□ -0.81
SNCA-212ENST00000611107 RRP36Q96EU6 259 aaKnown RBP9.99□□□□□ -0.81
SNCA-212ENST00000611107 TOX2Q96NM4 488 aa9.99□□□□□ -0.81
SNCA-212ENST00000611107 IWS1Q96ST2 819 aa9.99□□□□□ -0.81
SNCA-212ENST00000611107 WNT8AQ9H1J5 351 aa9.99□□□□□ -0.81
SNCA-212ENST00000611107 PNMA2Q9UL42 364 aa9.99□□□□□ -0.81
SNCA-212ENST00000611107 V9GY48 417 aaPredicted RBP9.99□□□□□ -0.81
SNCA-212ENST00000611107 STXBP3O00186 592 aa9.98□□□□□ -0.81
SNCA-212ENST00000611107 EDIL3O43854 480 aa9.98□□□□□ -0.81
SNCA-212ENST00000611107 ZNF286BP0CG31 522 aa9.98□□□□□ -0.81
SNCA-212ENST00000611107 ACRP10323 421 aa9.98□□□□□ -0.81
SNCA-212ENST00000611107 CSF2RAP15509 400 aa9.98□□□□□ -0.81
SNCA-212ENST00000611107 UBA1P22314 1058 aaKnown RBP9.98□□□□□ -0.81
SNCA-212ENST00000611107 METAP2P50579 478 aaKnown RBP eCLIP9.98□□□□□ -0.81
SNCA-212ENST00000611107 NEK4P51957 841 aa9.98□□□□□ -0.81
SNCA-212ENST00000611107 ZNF200P98182 395 aaPredicted RBP9.98□□□□□ -0.81
SNCA-212ENST00000611107 TTLL4Q14679 1199 aa9.98□□□□□ -0.81
SNCA-212ENST00000611107 NTRK3Q16288 839 aa9.98□□□□□ -0.81
SNCA-212ENST00000611107 TCTN1Q2MV58 587 aa9.98□□□□□ -0.81
SNCA-212ENST00000611107 HSDL1Q3SXM5 330 aa9.98□□□□□ -0.81
SNCA-212ENST00000611107 DHX38Q92620 1227 aaKnown RBP9.98□□□□□ -0.81
SNCA-212ENST00000611107 WNT8BQ93098 351 aa9.98□□□□□ -0.81
SNCA-212ENST00000611107 SCLYQ96I15 445 aa9.98□□□□□ -0.81
SNCA-212ENST00000611107 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.98□□□□□ -0.81
SNCA-212ENST00000611107 OSBPL7Q9BZF2 842 aa9.98□□□□□ -0.81
SNCA-212ENST00000611107 ALDH8A1Q9H2A2 487 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms