RNA–Protein interactions for RNA: ENST00000610481.1

MALAT1-204, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 353 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-204ENST00000610481 APOBRQ0VD83 1088 aa12.62□□□□□ -0.39
MALAT1-204ENST00000610481 ITGA7Q13683 1181 aa12.62□□□□□ -0.39
MALAT1-204ENST00000610481 USP17L6PQ6QN14 398 aa12.62□□□□□ -0.39
MALAT1-204ENST00000610481 HEATR3Q7Z4Q2 680 aa12.62□□□□□ -0.39
MALAT1-204ENST00000610481 VSIG10LQ86VR7 867 aa12.62□□□□□ -0.39
MALAT1-204ENST00000610481 FAM126BQ8IXS8 530 aa12.62□□□□□ -0.39
MALAT1-204ENST00000610481 SLC43A3Q8NBI5 491 aa12.62□□□□□ -0.39
MALAT1-204ENST00000610481 BRF1Q92994 677 aa12.62□□□□□ -0.39
MALAT1-204ENST00000610481 USP26Q9BXU7 913 aa12.62□□□□□ -0.39
MALAT1-204ENST00000610481 POLR3EQ9NVU0 708 aa12.62□□□□□ -0.39
MALAT1-204ENST00000610481 DDX41Q9UJV9 622 aaKnown RBP12.62□□□□□ -0.39
MALAT1-204ENST00000610481 TBX21Q9UL17 535 aa12.62□□□□□ -0.39
MALAT1-204ENST00000610481 MRVI1Q9Y6F6 885 aa12.62□□□□□ -0.39
MALAT1-204ENST00000610481 TRIOBPQ9H2D6 2365 aa12.62□□□□□ -0.39
MALAT1-204ENST00000610481 CNTNAP5Q8WYK1 1306 aa12.62□□□□□ -0.39
MALAT1-204ENST00000610481 MEIS2O14770 477 aa12.61□□□□□ -0.39
MALAT1-204ENST00000610481 EPB41L2O43491 1005 aaKnown RBP12.61□□□□□ -0.39
MALAT1-204ENST00000610481 RAG1P15918 1043 aa12.61□□□□□ -0.39
MALAT1-204ENST00000610481 CASTP20810 708 aaKnown RBP12.61□□□□□ -0.39
MALAT1-204ENST00000610481 PSMA5P28066 241 aa12.61□□□□□ -0.39
MALAT1-204ENST00000610481 CDC27P30260 824 aa12.61□□□□□ -0.39
MALAT1-204ENST00000610481 ARHGAP1Q07960 439 aa12.61□□□□□ -0.39
MALAT1-204ENST00000610481 FUT2Q10981 343 aa12.61□□□□□ -0.39
MALAT1-204ENST00000610481 BRDTQ58F21 947 aaPredicted RBP12.61□□□□□ -0.39
MALAT1-204ENST00000610481 SMARCC2Q8TAQ2 1214 aa12.61□□□□□ -0.39
MALAT1-204ENST00000610481 AFG1LQ8WV93 481 aa12.61□□□□□ -0.39
MALAT1-204ENST00000610481 GPKOWQ92917 476 aaPredicted RBP eCLIP12.61□□□□□ -0.39
MALAT1-204ENST00000610481 CUL5Q93034 780 aa12.61□□□□□ -0.39
MALAT1-204ENST00000610481 MTG1Q9BT17 334 aaPredicted RBP12.61□□□□□ -0.39
MALAT1-204ENST00000610481 PSTPIP2Q9H939 334 aa12.61□□□□□ -0.39
MALAT1-204ENST00000610481 FAM217BQ9NTX9 383 aaPredicted RBP12.61□□□□□ -0.39
MALAT1-204ENST00000610481 MCM3APO60318 1980 aa12.6□□□□□ -0.39
MALAT1-204ENST00000610481 PIK3CDO00329 1044 aa12.6□□□□□ -0.39
MALAT1-204ENST00000610481 TLR3O15455 904 aaKnown RBP12.6□□□□□ -0.39
MALAT1-204ENST00000610481 SORBS3O60504 671 aa12.6□□□□□ -0.39
MALAT1-204ENST00000610481 CD4P01730 458 aa12.6□□□□□ -0.39
MALAT1-204ENST00000610481 ADD1P35611 737 aaKnown RBP12.6□□□□□ -0.39
MALAT1-204ENST00000610481 METAP2P50579 478 aaKnown RBP eCLIP12.6□□□□□ -0.39
MALAT1-204ENST00000610481 RCAN1P53805 252 aa12.6□□□□□ -0.39
MALAT1-204ENST00000610481 MRPS9P82933 396 aaKnown RBP12.6□□□□□ -0.39
MALAT1-204ENST00000610481 WWC2Q6AWC2 1192 aa12.6□□□□□ -0.39
MALAT1-204ENST00000610481 PPP1R13LQ8WUF5 828 aa12.6□□□□□ -0.39
MALAT1-204ENST00000610481 LRCH3Q96II8 777 aa12.6□□□□□ -0.39
MALAT1-204ENST00000610481 TRPV6Q9H1D0 765 aa12.6□□□□□ -0.39
MALAT1-204ENST00000610481 V9GY48 417 aaPredicted RBP12.6□□□□□ -0.39
MALAT1-204ENST00000610481 FRMPD4Q14CM0 1322 aa12.6□□□□□ -0.39
MALAT1-204ENST00000610481 B4GALT4O60513 344 aa12.59□□□□□ -0.39
MALAT1-204ENST00000610481 KPNA6O60684 536 aa12.59□□□□□ -0.39
MALAT1-204ENST00000610481 TIMP1P01033 207 aa12.59□□□□□ -0.39
MALAT1-204ENST00000610481 MMP3P08254 477 aa12.59□□□□□ -0.39
MALAT1-204ENST00000610481 CHMP4BP1P59074 171 aa12.59□□□□□ -0.39
MALAT1-204ENST00000610481 UBE2SQ16763 222 aa12.59□□□□□ -0.39
MALAT1-204ENST00000610481 NBPF20Q3BBV1 942 aa12.59□□□□□ -0.39
MALAT1-204ENST00000610481 C9orf50Q5SZB4 431 aa12.59□□□□□ -0.39
MALAT1-204ENST00000610481 TYW1BQ6NUM6 668 aa12.59□□□□□ -0.39
MALAT1-204ENST00000610481 RUFY3Q7L099 469 aa12.59□□□□□ -0.39
MALAT1-204ENST00000610481 DHX37Q8IY37 1157 aaKnown RBP12.59□□□□□ -0.39
MALAT1-204ENST00000610481 FBXL16Q8N461 479 aa12.59□□□□□ -0.39
MALAT1-204ENST00000610481 SEZ6LQ9BYH1 1024 aa12.59□□□□□ -0.39
MALAT1-204ENST00000610481 AGXT2Q9BYV1 514 aa12.59□□□□□ -0.39
MALAT1-204ENST00000610481 PPP1R12CQ9BZL4 782 aa12.59□□□□□ -0.39
MALAT1-204ENST00000610481 ALDH8A1Q9H2A2 487 aaPredicted RBP12.59□□□□□ -0.39
MALAT1-204ENST00000610481 ZSWIM6Q9HCJ5 1215 aa12.59□□□□□ -0.39
MALAT1-204ENST00000610481 RTEL1Q9NZ71 1219 aa12.59□□□□□ -0.39
MALAT1-204ENST00000610481 UBA1P22314 1058 aaKnown RBP12.58□□□□□ -0.4
MALAT1-204ENST00000610481 EPHB4P54760 987 aa12.58□□□□□ -0.4
MALAT1-204ENST00000610481 NAPAP54920 295 aa12.58□□□□□ -0.4
MALAT1-204ENST00000610481 SP2Q02086 613 aa12.58□□□□□ -0.4
MALAT1-204ENST00000610481 FPGSQ05932 587 aa12.58□□□□□ -0.4
MALAT1-204ENST00000610481 LAMC2Q13753 1193 aa12.58□□□□□ -0.4
MALAT1-204ENST00000610481 SHHQ15465 462 aa12.58□□□□□ -0.4
MALAT1-204ENST00000610481 LRIT3Q3SXY7 679 aa12.58□□□□□ -0.4
MALAT1-204ENST00000610481 FAM47CQ5HY64 1035 aa12.58□□□□□ -0.4
MALAT1-204ENST00000610481 CELF3Q5SZQ8 465 aaKnown RBP12.58□□□□□ -0.4
MALAT1-204ENST00000610481 KCNV1Q6PIU1 500 aa12.58□□□□□ -0.4
MALAT1-204ENST00000610481 EMID1Q96A84 441 aaPredicted RBP12.58□□□□□ -0.4
MALAT1-204ENST00000610481 UPF3BQ9BZI7 483 aaKnown RBP12.58□□□□□ -0.4
MALAT1-204ENST00000610481 TRMT13Q9NUP7 481 aaKnown RBP12.58□□□□□ -0.4
MALAT1-204ENST00000610481 CYP46A1Q9Y6A2 500 aa12.58□□□□□ -0.4
MALAT1-204ENST00000610481 SZT2Q5T011 3432 aa12.58□□□□□ -0.4
MALAT1-204ENST00000610481 CCDC196A0A1B0GTZ2 297 aa12.57□□□□□ -0.4
MALAT1-204ENST00000610481 STXBP3O00186 592 aa12.57□□□□□ -0.4
MALAT1-204ENST00000610481 PPFIA3O75145 1194 aa12.57□□□□□ -0.4
MALAT1-204ENST00000610481 STAM2O75886 525 aa12.57□□□□□ -0.4
MALAT1-204ENST00000610481 GGPS1O95749 300 aa12.57□□□□□ -0.4
MALAT1-204ENST00000610481 CYP2C18P33260 490 aa12.57□□□□□ -0.4
MALAT1-204ENST00000610481 TOB2Q14106 344 aaPredicted RBP12.57□□□□□ -0.4
MALAT1-204ENST00000610481 DGKDQ16760 1214 aa12.57□□□□□ -0.4
MALAT1-204ENST00000610481 GNPTABQ3T906 1256 aa12.57□□□□□ -0.4
MALAT1-204ENST00000610481 MYSM1Q5VVJ2 828 aa12.57□□□□□ -0.4
MALAT1-204ENST00000610481 PCNX4Q63HM2 1172 aa12.57□□□□□ -0.4
MALAT1-204ENST00000610481 MFSD5Q6N075 450 aa12.57□□□□□ -0.4
MALAT1-204ENST00000610481 PPTC7Q8NI37 304 aa12.57□□□□□ -0.4
MALAT1-204ENST00000610481 KAT2BQ92831 832 aa12.57□□□□□ -0.4
MALAT1-204ENST00000610481 SPATA33Q96N06 139 aa12.57□□□□□ -0.4
MALAT1-204ENST00000610481 INPP4AQ96PE3 977 aaPredicted RBP12.57□□□□□ -0.4
MALAT1-204ENST00000610481 BCAS3Q9H6U6 928 aa12.57□□□□□ -0.4
MALAT1-204ENST00000610481 UMODL1Q5DID0 1318 aa12.57□□□□□ -0.4
MALAT1-204ENST00000610481 NID2Q14112 1375 aa12.56□□□□□ -0.4
MALAT1-204ENST00000610481 SPDYE3A6NKU9 549 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms