RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 SLC16A2P36021 539 aa22.59■■□□□ 1.21
SSBP3-216ENST00000610401 AARSP49588 968 aaKnown RBP eCLIP22.59■■□□□ 1.214e-6■■■■■ 36.2
SSBP3-216ENST00000610401 TMED8Q6PL24 325 aaPredicted RBP22.59■■□□□ 1.21
SSBP3-216ENST00000610401 CCDC170Q8IYT3 715 aa22.59■■□□□ 1.21
SSBP3-216ENST00000610401 FAM133AQ8N9E0 248 aa22.59■■□□□ 1.21
SSBP3-216ENST00000610401 STIM2Q9P246 746 aa22.59■■□□□ 1.21
SSBP3-216ENST00000610401 CALCRLQ16602 461 aa22.58■■□□□ 1.21
SSBP3-216ENST00000610401 C12orf60Q5U649 245 aa22.58■■□□□ 1.21
SSBP3-216ENST00000610401 IQCEQ6IPM2 695 aa22.58■■□□□ 1.21
SSBP3-216ENST00000610401 FAM114A1Q8IWE2 563 aa22.58■■□□□ 1.21
SSBP3-216ENST00000610401 DDX12PQ92771 950 aa22.58■■□□□ 1.21
SSBP3-216ENST00000610401 NLRP3Q96P20 1036 aa22.58■■□□□ 1.21
SSBP3-216ENST00000610401 CICQ96RK0 1608 aaPredicted RBP22.58■■□□□ 1.21
SSBP3-216ENST00000610401 SHTN1A0MZ66 631 aa22.58■■□□□ 1.21
SSBP3-216ENST00000610401 TUBBP07437 444 aa22.58■■□□□ 1.21
SSBP3-216ENST00000610401 NNTQ13423 1086 aa22.58■■□□□ 1.21
SSBP3-216ENST00000610401 CNNM4Q6P4Q7 775 aa22.58■■□□□ 1.21
SSBP3-216ENST00000610401 ADAT2Q7Z6V5 191 aaKnown RBP22.58■■□□□ 1.21
SSBP3-216ENST00000610401 EYA3Q99504 573 aa22.58■■□□□ 1.21
SSBP3-216ENST00000610401 ZNF652Q9Y2D9 606 aa22.58■■□□□ 1.21
SSBP3-216ENST00000610401 UBR2Q8IWV8 1755 aa22.58■■□□□ 1.21
SSBP3-216ENST00000610401 TOGARAM1Q9Y4F4 1720 aa22.58■■□□□ 1.21
SSBP3-216ENST00000610401 AENQ8WTP8 325 aaKnown RBP22.58■■□□□ 1.2
SSBP3-216ENST00000610401 PPM1EQ8WY54 764 aa22.58■■□□□ 1.2
SSBP3-216ENST00000610401 LSM14BQ9BX40 385 aaKnown RBP22.58■■□□□ 1.2
SSBP3-216ENST00000610401 TLR10Q9BXR5 811 aa22.58■■□□□ 1.2
SSBP3-216ENST00000610401 AP1M1Q9BXS5 423 aa22.58■■□□□ 1.2
SSBP3-216ENST00000610401 CCSER1Q9C0I3 900 aa22.58■■□□□ 1.2
SSBP3-216ENST00000610401 PLAGL2Q9UPG8 496 aa22.58■■□□□ 1.2
SSBP3-216ENST00000610401 HYOU1Q9Y4L1 999 aa22.58■■□□□ 1.2
SSBP3-216ENST00000610401 ZNF142P52746 1687 aaPredicted RBP22.57■■□□□ 1.2
SSBP3-216ENST00000610401 NUP98P52948 1817 aa22.57■■□□□ 1.2
SSBP3-216ENST00000610401 ERLIN2O94905 339 aa22.57■■□□□ 1.2
SSBP3-216ENST00000610401 NFIXQ14938 502 aa22.57■■□□□ 1.2
SSBP3-216ENST00000610401 AMOTL1Q8IY63 956 aa22.57■■□□□ 1.2
SSBP3-216ENST00000610401 KAT2BQ92831 832 aa22.57■■□□□ 1.2
SSBP3-216ENST00000610401 ACTN1P12814 892 aa22.57■■□□□ 1.2
SSBP3-216ENST00000610401 FBXO33Q7Z6M2 555 aa22.57■■□□□ 1.2
SSBP3-216ENST00000610401 REXO1Q8N1G1 1221 aaKnown RBP22.57■■□□□ 1.2
SSBP3-216ENST00000610401 MARCH10Q8NA82 808 aaPredicted RBP22.57■■□□□ 1.2
SSBP3-216ENST00000610401 TRIM31Q9BZY9 425 aa22.57■■□□□ 1.2
SSBP3-216ENST00000610401 VIPAS39Q9H9C1 493 aa22.57■■□□□ 1.2
SSBP3-216ENST00000610401 PPANQ9NQ55 473 aaKnown RBP22.57■■□□□ 1.2
SSBP3-216ENST00000610401 EPS15P42566 896 aa22.56■■□□□ 1.2
SSBP3-216ENST00000610401 GRB10Q13322 594 aa22.56■■□□□ 1.2
SSBP3-216ENST00000610401 TADA2BQ86TJ2 420 aa22.56■■□□□ 1.2
SSBP3-216ENST00000610401 LARP4BQ92615 738 aaKnown RBP22.56■■□□□ 1.2
SSBP3-216ENST00000610401 CEP95Q96GE4 821 aa22.56■■□□□ 1.2
SSBP3-216ENST00000610401 EP400Q96L91 3159 aa22.56■■□□□ 1.2
SSBP3-216ENST00000610401 KLRC1P26715 233 aa22.56■■□□□ 1.2
SSBP3-216ENST00000610401 SLC20A2Q08357 652 aa22.56■■□□□ 1.2
SSBP3-216ENST00000610401 GRM4Q14833 912 aa22.56■■□□□ 1.2
SSBP3-216ENST00000610401 ECM1Q16610 540 aa22.56■■□□□ 1.2
SSBP3-216ENST00000610401 KIAA0753Q2KHM9 967 aa22.56■■□□□ 1.2
SSBP3-216ENST00000610401 CFAP58Q5T655 872 aa22.56■■□□□ 1.2
SSBP3-216ENST00000610401 C6orf50Q9HD87 102 aa22.56■■□□□ 1.2
SSBP3-216ENST00000610401 MNAT1P51948 309 aa22.56■■□□□ 1.2
SSBP3-216ENST00000610401 AMPD3Q01432 767 aa22.56■■□□□ 1.2
SSBP3-216ENST00000610401 SPTY2D1Q68D10 685 aaPredicted RBP22.56■■□□□ 1.2
SSBP3-216ENST00000610401 TARSL2A2RTX5 802 aaKnown RBP22.55■■□□□ 1.2
SSBP3-216ENST00000610401 BLOC1S4Q9NUP1 217 aa22.55■■□□□ 1.2
SSBP3-216ENST00000610401 DUOX1Q9NRD9 1551 aa22.55■■□□□ 1.2
SSBP3-216ENST00000610401 MYH3P11055 1940 aa22.55■■□□□ 1.2
SSBP3-216ENST00000610401 MYO1FO00160 1098 aa22.55■■□□□ 1.2
SSBP3-216ENST00000610401 KLHDC7AQ5VTJ3 777 aa22.55■■□□□ 1.2
SSBP3-216ENST00000610401 NAA35Q5VZE5 725 aa22.55■■□□□ 1.2
SSBP3-216ENST00000610401 NOX5Q96PH1 765 aa22.55■■□□□ 1.2
SSBP3-216ENST00000610401 SIK3Q9Y2K2 1263 aa22.55■■□□□ 1.2
SSBP3-216ENST00000610401 CAPN7Q9Y6W3 813 aa22.55■■□□□ 1.2
SSBP3-216ENST00000610401 TMCO5BA8MYB1 307 aa22.54■■□□□ 1.2
SSBP3-216ENST00000610401 E9PMD0 336 aa22.54■■□□□ 1.2
SSBP3-216ENST00000610401 M0R2N6 131 aa22.54■■□□□ 1.2
SSBP3-216ENST00000610401 FGRP09769 529 aa22.54■■□□□ 1.2
SSBP3-216ENST00000610401 TCERG1LQ5VWI1 586 aa22.54■■□□□ 1.2
SSBP3-216ENST00000610401 RNPC3Q96LT9 517 aaKnown RBP22.54■■□□□ 1.2
SSBP3-216ENST00000610401 SETDB2Q96T68 719 aa22.54■■□□□ 1.2
SSBP3-216ENST00000610401 BCS1LQ9Y276 419 aa22.54■■□□□ 1.2
SSBP3-216ENST00000610401 KCNK3O14649 394 aa22.54■■□□□ 1.2
SSBP3-216ENST00000610401 KRT18P05783 430 aaKnown RBP22.54■■□□□ 1.2
SSBP3-216ENST00000610401 RASA1P20936 1047 aa22.54■■□□□ 1.2
SSBP3-216ENST00000610401 PPFIA1Q13136 1202 aa22.54■■□□□ 1.2
SSBP3-216ENST00000610401 DGKHQ86XP1 1220 aa22.54■■□□□ 1.2
SSBP3-216ENST00000610401 TSGA10Q9BZW7 698 aa22.54■■□□□ 1.2
SSBP3-216ENST00000610401 ANO9A1A5B4 782 aa22.53■■□□□ 1.2
SSBP3-216ENST00000610401 ICE2Q659A1 982 aa22.53■■□□□ 1.2
SSBP3-216ENST00000610401 SAMD1Q6SPF0 538 aaPredicted RBP22.53■■□□□ 1.2
SSBP3-216ENST00000610401 LINC00116Q8NCU8 138 aa22.53■■□□□ 1.2
SSBP3-216ENST00000610401 IPO4Q8TEX9 1081 aaKnown RBP22.53■■□□□ 1.2
SSBP3-216ENST00000610401 RPGRIP1Q96KN7 1286 aa22.53■■□□□ 1.2
SSBP3-216ENST00000610401 CEP85LQ5SZL2 805 aa22.53■■□□□ 1.2
SSBP3-216ENST00000610401 PNMA5Q96PV4 448 aa22.53■■□□□ 1.2
SSBP3-216ENST00000610401 ERGIC2Q96RQ1 377 aa22.53■■□□□ 1.2
SSBP3-216ENST00000610401 BCAS3Q9H6U6 928 aa22.53■■□□□ 1.2
SSBP3-216ENST00000610401 A0A087X0T9 212 aa22.52■■□□□ 1.2
SSBP3-216ENST00000610401 MEIS1O00470 390 aa22.52■■□□□ 1.2
SSBP3-216ENST00000610401 FAM228BP0C875 321 aa22.52■■□□□ 1.2
SSBP3-216ENST00000610401 INPP5BP32019 993 aa22.52■■□□□ 1.2
SSBP3-216ENST00000610401 SNAP25P60880 206 aa22.52■■□□□ 1.2
SSBP3-216ENST00000610401 MAN2A1Q16706 1144 aa22.52■■□□□ 1.2
SSBP3-216ENST00000610401 SLC30A10Q6XR72 485 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms