RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 ARHGAP20Q9P2F6 1191 aa16.26■□□□□ 0.19
CTCFL-219ENST00000608720 TXKP42681 527 aa16.26■□□□□ 0.19
CTCFL-219ENST00000608720 KIF11P52732 1056 aa16.26■□□□□ 0.19
CTCFL-219ENST00000608720 LRRC63Q05C16 580 aa16.26■□□□□ 0.19
CTCFL-219ENST00000608720 CALCRLQ16602 461 aa16.26■□□□□ 0.19
CTCFL-219ENST00000608720 TMEM266Q2M3C6 531 aa16.26■□□□□ 0.19
CTCFL-219ENST00000608720 KRT26Q7Z3Y9 468 aa16.26■□□□□ 0.19
CTCFL-219ENST00000608720 POTEDQ86YR6 584 aa16.26■□□□□ 0.19
CTCFL-219ENST00000608720 CCDC24Q8N4L8 307 aa16.26■□□□□ 0.19
CTCFL-219ENST00000608720 CDK5RAP3Q96JB5 506 aa16.26■□□□□ 0.19
CTCFL-219ENST00000608720 DRC1Q96MC2 740 aa16.26■□□□□ 0.19
CTCFL-219ENST00000608720 ALS2CR12Q96Q35 445 aa16.26■□□□□ 0.19
CTCFL-219ENST00000608720 SELENOOQ9BVL4 669 aa16.26■□□□□ 0.19
CTCFL-219ENST00000608720 BLOC1S4Q9NUP1 217 aa16.26■□□□□ 0.19
CTCFL-219ENST00000608720 ZC3H4Q9UPT8 1303 aaKnown RBP16.26■□□□□ 0.19
CTCFL-219ENST00000608720 COL5A3P25940 1745 aaPredicted RBP16.25■□□□□ 0.19
CTCFL-219ENST00000608720 MYMKA6NI61 221 aa16.25■□□□□ 0.19
CTCFL-219ENST00000608720 ZMYND10O75800 440 aa16.25■□□□□ 0.19
CTCFL-219ENST00000608720 PLEKP08567 350 aaPredicted RBP16.25■□□□□ 0.19
CTCFL-219ENST00000608720 TCP1P17987 556 aaKnown RBP16.25■□□□□ 0.19
CTCFL-219ENST00000608720 EIF4A3P38919 411 aaKnown RBP16.25■□□□□ 0.19
CTCFL-219ENST00000608720 KCNQ4P56696 695 aa16.25■□□□□ 0.19
CTCFL-219ENST00000608720 C2orf54Q08AI8 447 aa16.25■□□□□ 0.19
CTCFL-219ENST00000608720 DNAJC21Q5F1R6 531 aaKnown RBP16.25■□□□□ 0.19
CTCFL-219ENST00000608720 FOXR1Q6PIV2 292 aa16.25■□□□□ 0.19
CTCFL-219ENST00000608720 FOXR2Q6PJQ5 311 aa16.25■□□□□ 0.19
CTCFL-219ENST00000608720 SMIM5Q71RC9 77 aa16.25■□□□□ 0.19
CTCFL-219ENST00000608720 LARP4BQ92615 738 aaKnown RBP16.25■□□□□ 0.19
CTCFL-219ENST00000608720 HPS3Q969F9 1004 aa16.25■□□□□ 0.19
CTCFL-219ENST00000608720 PIGSQ96S52 555 aa16.25■□□□□ 0.19
CTCFL-219ENST00000608720 RTFDC1Q9BY42 306 aaPredicted RBP16.25■□□□□ 0.19
CTCFL-219ENST00000608720 RAB34Q9BZG1 259 aa16.25■□□□□ 0.19
CTCFL-219ENST00000608720 EDEM3Q9BZQ6 932 aa16.25■□□□□ 0.19
CTCFL-219ENST00000608720 MMRN2Q9H8L6 949 aa16.25■□□□□ 0.19
CTCFL-219ENST00000608720 VAT1LQ9HCJ6 419 aa16.25■□□□□ 0.19
CTCFL-219ENST00000608720 BIN2Q9UBW5 565 aaPredicted RBP16.25■□□□□ 0.19
CTCFL-219ENST00000608720 FAM184BQ9ULE4 1060 aa16.25■□□□□ 0.19
CTCFL-219ENST00000608720 CASZ1Q86V15 1759 aa16.25■□□□□ 0.19
CTCFL-219ENST00000608720 AKR1B10O60218 316 aa16.25■□□□□ 0.19
CTCFL-219ENST00000608720 PSMD2Q13200 908 aa16.25■□□□□ 0.19
CTCFL-219ENST00000608720 PDIA5Q14554 519 aa16.25■□□□□ 0.19
CTCFL-219ENST00000608720 GRIK5Q16478 980 aa16.25■□□□□ 0.19
CTCFL-219ENST00000608720 PNMA5Q96PV4 448 aa16.25■□□□□ 0.19
CTCFL-219ENST00000608720 FAM207AQ9NSI2 230 aaPredicted RBP16.25■□□□□ 0.19
CTCFL-219ENST00000608720 PLCG2P16885 1265 aa16.24■□□□□ 0.19
CTCFL-219ENST00000608720 BTDP43251 543 aa16.24■□□□□ 0.19
CTCFL-219ENST00000608720 ARHGAP27Q6ZUM4 889 aa16.24■□□□□ 0.19
CTCFL-219ENST00000608720 C15orf52Q6ZUT6 534 aaKnown RBP16.24■□□□□ 0.19
CTCFL-219ENST00000608720 AENQ8WTP8 325 aaKnown RBP16.24■□□□□ 0.19
CTCFL-219ENST00000608720 RIOX1Q9H6W3 641 aa16.24■□□□□ 0.19
CTCFL-219ENST00000608720 RIC8AQ9NPQ8 531 aa16.24■□□□□ 0.19
CTCFL-219ENST00000608720 CCDC88AQ3V6T2 1871 aa16.24■□□□□ 0.19
CTCFL-219ENST00000608720 NKRFO15226 690 aaKnown RBP eCLIP16.23■□□□□ 0.19
CTCFL-219ENST00000608720 PJA2O43164 708 aa16.23■□□□□ 0.19
CTCFL-219ENST00000608720 MOCS3O95396 460 aa16.23■□□□□ 0.19
CTCFL-219ENST00000608720 GGCXP38435 758 aa16.23■□□□□ 0.19
CTCFL-219ENST00000608720 NOVP48745 357 aa16.23■□□□□ 0.19
CTCFL-219ENST00000608720 GRAPQ13588 217 aa16.23■□□□□ 0.19
CTCFL-219ENST00000608720 RRAGAQ7L523 313 aa16.23■□□□□ 0.19
CTCFL-219ENST00000608720 GRAPLQ8TC17 118 aaPredicted RBP16.23■□□□□ 0.19
CTCFL-219ENST00000608720 SMCR8Q8TEV9 937 aaPredicted RBP16.23■□□□□ 0.19
CTCFL-219ENST00000608720 RAD54LQ92698 747 aa16.23■□□□□ 0.19
CTCFL-219ENST00000608720 TSG101Q99816 390 aa16.23■□□□□ 0.19
CTCFL-219ENST00000608720 HYOU1Q9Y4L1 999 aa16.23■□□□□ 0.19
CTCFL-219ENST00000608720 CAPN6Q9Y6Q1 641 aa16.23■□□□□ 0.19
CTCFL-219ENST00000608720 ZNF831Q5JPB2 1677 aa16.23■□□□□ 0.19
CTCFL-219ENST00000608720 GPR75-ASB3A0A0A6YYF3 556 aa16.23■□□□□ 0.19
CTCFL-219ENST00000608720 EPHB6O15197 1021 aa16.23■□□□□ 0.19
CTCFL-219ENST00000608720 KIF1CO43896 1103 aaKnown RBP16.23■□□□□ 0.19
CTCFL-219ENST00000608720 MYBL2P10244 700 aa16.23■□□□□ 0.19
CTCFL-219ENST00000608720 MAGEA1P43355 309 aa16.23■□□□□ 0.19
CTCFL-219ENST00000608720 TEX11Q8IYF3 940 aa16.23■□□□□ 0.19
CTCFL-219ENST00000608720 SPATA4Q8NEY3 305 aa16.23■□□□□ 0.19
CTCFL-219ENST00000608720 OSBPL9Q96SU4 736 aa16.23■□□□□ 0.19
CTCFL-219ENST00000608720 MLXIPQ9HAP2 919 aa16.23■□□□□ 0.19
CTCFL-219ENST00000608720 TMEM260Q9NX78 707 aa16.23■□□□□ 0.19
CTCFL-219ENST00000608720 LRRC53A6NM62 1247 aa16.22■□□□□ 0.19
CTCFL-219ENST00000608720 CCDC172P0C7W6 258 aa16.22■□□□□ 0.19
CTCFL-219ENST00000608720 KRT79Q5XKE5 535 aa16.22■□□□□ 0.19
CTCFL-219ENST00000608720 DYMQ7RTS9 669 aa16.22■□□□□ 0.19
CTCFL-219ENST00000608720 PROM2Q8N271 834 aa16.22■□□□□ 0.19
CTCFL-219ENST00000608720 CCDC155Q8N6L0 562 aa16.22■□□□□ 0.19
CTCFL-219ENST00000608720 CEP95Q96GE4 821 aa16.22■□□□□ 0.19
CTCFL-219ENST00000608720 SNED1Q8TER0 1413 aa16.22■□□□□ 0.19
CTCFL-219ENST00000608720 NRAPQ86VF7 1730 aa16.22■□□□□ 0.19
CTCFL-219ENST00000608720 SSU72P8A0A1W2PR75 194 aa16.22■□□□□ 0.19
CTCFL-219ENST00000608720 GOLGA6BA6NDN3 693 aa16.22■□□□□ 0.19
CTCFL-219ENST00000608720 AGPSO00116 658 aa16.22■□□□□ 0.19
CTCFL-219ENST00000608720 USP8P40818 1118 aa16.22■□□□□ 0.19
CTCFL-219ENST00000608720 ADCY7P51828 1080 aa16.22■□□□□ 0.19
CTCFL-219ENST00000608720 FAM182BQ5T319 152 aa16.22■□□□□ 0.19
CTCFL-219ENST00000608720 PDXDC1Q6P996 788 aa16.22■□□□□ 0.19
CTCFL-219ENST00000608720 LRRC55Q6ZSA7 311 aa16.22■□□□□ 0.19
CTCFL-219ENST00000608720 GSPT2Q8IYD1 628 aaKnown RBP16.22■□□□□ 0.19
CTCFL-219ENST00000608720 RNF10Q8N5U6 811 aaKnown RBP16.22■□□□□ 0.19
CTCFL-219ENST00000608720 BAP1Q92560 729 aa16.22■□□□□ 0.19
CTCFL-219ENST00000608720 ZNF622Q969S3 477 aaKnown RBP eCLIP16.22■□□□□ 0.193e-23■□□□□ 9.7
CTCFL-219ENST00000608720 GDAP1L1Q96MZ0 367 aa16.22■□□□□ 0.19
CTCFL-219ENST00000608720 TACO1Q9BSH4 297 aaKnown RBP16.22■□□□□ 0.19
CTCFL-219ENST00000608720 LRRC1Q9BTT6 524 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms