RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 VPS37DQ86XT2 251 aa5.68□□□□□ -1.5
SSX9-202ENST00000608568 CCAR1Q8IX12 1150 aaKnown RBP5.68□□□□□ -1.5
SSX9-202ENST00000608568 CCDC170Q8IYT3 715 aa5.68□□□□□ -1.5
SSX9-202ENST00000608568 DRAXINQ8NBI3 349 aaPredicted RBP5.68□□□□□ -1.5
SSX9-202ENST00000608568 CCHCR1Q8TD31 782 aa5.68□□□□□ -1.5
SSX9-202ENST00000608568 LEO1Q8WVC0 666 aaPredicted RBP5.68□□□□□ -1.5
SSX9-202ENST00000608568 LPIN2Q92539 896 aa5.68□□□□□ -1.5
SSX9-202ENST00000608568 SAAL1Q96ER3 474 aa5.68□□□□□ -1.5
SSX9-202ENST00000608568 DTNBP1Q96EV8 351 aa5.68□□□□□ -1.5
SSX9-202ENST00000608568 CCDC34Q96HJ3 373 aa5.68□□□□□ -1.5
SSX9-202ENST00000608568 OSBPL9Q96SU4 736 aa5.68□□□□□ -1.5
SSX9-202ENST00000608568 JPH2Q9BR39 696 aaPredicted RBP5.68□□□□□ -1.5
SSX9-202ENST00000608568 NAA15Q9BXJ9 866 aaKnown RBP5.68□□□□□ -1.5
SSX9-202ENST00000608568 DNAJC25Q9H1X3 360 aa5.68□□□□□ -1.5
SSX9-202ENST00000608568 FAM204AQ9H8W3 233 aa5.68□□□□□ -1.5
SSX9-202ENST00000608568 PNMA3Q9UL41 463 aa5.68□□□□□ -1.5
SSX9-202ENST00000608568 FAN1Q9Y2M0 1017 aa5.68□□□□□ -1.5
SSX9-202ENST00000608568 PTCH2Q9Y6C5 1203 aa5.68□□□□□ -1.5
SSX9-202ENST00000608568 GAKO14976 1311 aa5.68□□□□□ -1.5
SSX9-202ENST00000608568 SALL3Q9BXA9 1300 aa5.68□□□□□ -1.5
SSX9-202ENST00000608568 LAMA4Q16363 1823 aa5.67□□□□□ -1.5
SSX9-202ENST00000608568 ZNF236Q9UL36 1845 aa5.67□□□□□ -1.5
SSX9-202ENST00000608568 DDTLA6NHG4 134 aaPredicted RBP5.67□□□□□ -1.5
SSX9-202ENST00000608568 GOLGA8KD6RF30 607 aa5.67□□□□□ -1.5
SSX9-202ENST00000608568 PDLIM1O00151 329 aa5.67□□□□□ -1.5
SSX9-202ENST00000608568 ABLIM1O14639 778 aa5.67□□□□□ -1.5
SSX9-202ENST00000608568 MEFVO15553 781 aaPredicted RBP5.67□□□□□ -1.5
SSX9-202ENST00000608568 AHCYL1O43865 530 aa5.67□□□□□ -1.5
SSX9-202ENST00000608568 KINO60870 393 aaKnown RBP5.67□□□□□ -1.5
SSX9-202ENST00000608568 CUTAO60888 179 aa5.67□□□□□ -1.5
SSX9-202ENST00000608568 PPFIA2O75334 1257 aa5.67□□□□□ -1.5
SSX9-202ENST00000608568 CIAO1O76071 339 aa5.67□□□□□ -1.5
SSX9-202ENST00000608568 PRPF6O94906 941 aaKnown RBP5.67□□□□□ -1.5
SSX9-202ENST00000608568 IFIT1P09914 478 aaKnown RBP5.67□□□□□ -1.5
SSX9-202ENST00000608568 MYBL2P10244 700 aa5.67□□□□□ -1.5
SSX9-202ENST00000608568 SCP2P22307 547 aa5.67□□□□□ -1.5
SSX9-202ENST00000608568 PSMA5P28066 241 aa5.67□□□□□ -1.5
SSX9-202ENST00000608568 GJB2P29033 226 aa5.67□□□□□ -1.5
SSX9-202ENST00000608568 FNTAP49354 379 aa5.67□□□□□ -1.5
SSX9-202ENST00000608568 RPS6KA3P51812 740 aa5.67□□□□□ -1.5
SSX9-202ENST00000608568 TIMM10P62072 90 aa5.67□□□□□ -1.5
SSX9-202ENST00000608568 SKOR1P84550 965 aa5.67□□□□□ -1.5
SSX9-202ENST00000608568 HDLBPQ00341 1268 aaKnown RBP5.67□□□□□ -1.5
SSX9-202ENST00000608568 APBA1Q02410 837 aa5.67□□□□□ -1.5
SSX9-202ENST00000608568 TBC1D8BQ0IIM8 1120 aa5.67□□□□□ -1.5
SSX9-202ENST00000608568 TFCP2Q12800 502 aa5.67□□□□□ -1.5
SSX9-202ENST00000608568 G3BP1Q13283 466 aaKnown RBP eCLIP5.67□□□□□ -1.5
SSX9-202ENST00000608568 TNFAIP1Q13829 316 aa5.67□□□□□ -1.5
SSX9-202ENST00000608568 RRP1BQ14684 758 aaKnown RBP5.67□□□□□ -1.5
SSX9-202ENST00000608568 TAF1CQ15572 869 aaPredicted RBP5.67□□□□□ -1.5
SSX9-202ENST00000608568 KIAA0753Q2KHM9 967 aa5.67□□□□□ -1.5
SSX9-202ENST00000608568 SUPT20HL1Q3ZLR7 823 aa5.67□□□□□ -1.5
SSX9-202ENST00000608568 CAVIN4Q5BKX8 364 aa5.67□□□□□ -1.5
SSX9-202ENST00000608568 CEP85LQ5SZL2 805 aa5.67□□□□□ -1.5
SSX9-202ENST00000608568 EMC10Q5UCC4 262 aa5.67□□□□□ -1.5
SSX9-202ENST00000608568 LARP1BQ659C4 914 aaKnown RBP5.67□□□□□ -1.5
SSX9-202ENST00000608568 CCDC102BQ68D86 513 aa5.67□□□□□ -1.5
SSX9-202ENST00000608568 CEP85Q6P2H3 762 aa5.67□□□□□ -1.5
SSX9-202ENST00000608568 HHIPL2Q6UWX4 724 aa5.67□□□□□ -1.5
SSX9-202ENST00000608568 CRELD2Q6UXH1 353 aaPredicted RBP5.67□□□□□ -1.5
SSX9-202ENST00000608568 CCDC73Q6ZRK6 1079 aa5.67□□□□□ -1.5
SSX9-202ENST00000608568 FAM83AQ86UY5 434 aa5.67□□□□□ -1.5
SSX9-202ENST00000608568 MFN1Q8IWA4 741 aa5.67□□□□□ -1.5
SSX9-202ENST00000608568 DHX40Q8IX18 779 aaKnown RBP5.67□□□□□ -1.5
SSX9-202ENST00000608568 SLF2Q8IX21 1173 aa5.67□□□□□ -1.5
SSX9-202ENST00000608568 C1orf131Q8NDD1 294 aaKnown RBP5.67□□□□□ -1.5
SSX9-202ENST00000608568 FAM76AQ8TAV0 307 aa5.67□□□□□ -1.5
SSX9-202ENST00000608568 EPS8L1Q8TE68 723 aa5.67□□□□□ -1.5
SSX9-202ENST00000608568 RUFY2Q8WXA3 655 aa5.67□□□□□ -1.5
SSX9-202ENST00000608568 KAT2BQ92831 832 aa5.67□□□□□ -1.5
SSX9-202ENST00000608568 MRRFQ96E11 262 aaKnown RBP5.67□□□□□ -1.5
SSX9-202ENST00000608568 CHAMP1Q96JM3 812 aa5.67□□□□□ -1.5
SSX9-202ENST00000608568 JAKMIP1Q96N16 626 aaKnown RBP5.67□□□□□ -1.5
SSX9-202ENST00000608568 UPF3BQ9BZI7 483 aaKnown RBP5.67□□□□□ -1.5
SSX9-202ENST00000608568 ANO2Q9NQ90 1003 aa5.67□□□□□ -1.5
SSX9-202ENST00000608568 COPRSQ9NQ92 184 aa5.67□□□□□ -1.5
SSX9-202ENST00000608568 KLC4Q9NSK0 619 aa5.67□□□□□ -1.5
SSX9-202ENST00000608568 CHCHD3Q9NX63 227 aaKnown RBP5.67□□□□□ -1.5
SSX9-202ENST00000608568 TLR7Q9NYK1 1049 aaKnown RBP5.67□□□□□ -1.5
SSX9-202ENST00000608568 CDC23Q9UJX2 597 aa5.67□□□□□ -1.5
SSX9-202ENST00000608568 SALL1Q9NSC2 1324 aa5.67□□□□□ -1.5
SSX9-202ENST00000608568 VCANP13611 3396 aa5.66□□□□□ -1.5
SSX9-202ENST00000608568 COL2A1P02458 1487 aaPredicted RBP5.66□□□□□ -1.5
SSX9-202ENST00000608568 CHD7Q9P2D1 2997 aa5.66□□□□□ -1.5
SSX9-202ENST00000608568 PHF20L1A8MW92 1017 aa5.66□□□□□ -1.5
SSX9-202ENST00000608568 C3orf80F5H4A9 247 aa5.66□□□□□ -1.5
SSX9-202ENST00000608568 EIF3HO15372 352 aaKnown RBP eCLIP5.66□□□□□ -1.5
SSX9-202ENST00000608568 OPA1O60313 960 aa5.66□□□□□ -1.5
SSX9-202ENST00000608568 RNF40O75150 1001 aa5.66□□□□□ -1.5
SSX9-202ENST00000608568 WDHD1O75717 1129 aaPredicted RBP5.66□□□□□ -1.5
SSX9-202ENST00000608568 RASSF9O75901 435 aa5.66□□□□□ -1.5
SSX9-202ENST00000608568 MYCP01106 439 aaPredicted RBP5.66□□□□□ -1.5
SSX9-202ENST00000608568 FESP07332 822 aa5.66□□□□□ -1.5
SSX9-202ENST00000608568 EPB41P11171 864 aaKnown RBP5.66□□□□□ -1.5
SSX9-202ENST00000608568 IMPDH2P12268 514 aa5.66□□□□□ -1.5
SSX9-202ENST00000608568 HOXB3P14651 431 aaPredicted RBP5.66□□□□□ -1.5
SSX9-202ENST00000608568 EN2P19622 333 aaPredicted RBP5.66□□□□□ -1.5
SSX9-202ENST00000608568 COL9A1P20849 921 aa5.66□□□□□ -1.5
SSX9-202ENST00000608568 MCAMP43121 646 aa5.66□□□□□ -1.5
SSX9-202ENST00000608568 LIG3P49916 1009 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms