RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 NSMFQ6X4W1 530 aa6.85□□□□□ -1.31
HDDC2-207ENST00000608532 AMIGO3Q86WK7 504 aa6.85□□□□□ -1.31
HDDC2-207ENST00000608532 DACT3Q96B18 629 aaPredicted RBP6.85□□□□□ -1.31
HDDC2-207ENST00000608532 RNF38Q9H0F5 515 aa6.85□□□□□ -1.31
HDDC2-207ENST00000608532 BLACEA4D250 179 aa6.84□□□□□ -1.31
HDDC2-207ENST00000608532 SGSM2O43147 1006 aa6.84□□□□□ -1.31
HDDC2-207ENST00000608532 CAPNS1P04632 268 aa6.84□□□□□ -1.31
HDDC2-207ENST00000608532 PABPC1P11940 636 aaKnown RBP6.84□□□□□ -1.31
HDDC2-207ENST00000608532 IGFBP6P24592 240 aaPredicted RBP6.84□□□□□ -1.31
HDDC2-207ENST00000608532 MROH9Q5TGP6 573 aa6.84□□□□□ -1.31
HDDC2-207ENST00000608532 NBPF6Q5VWK0 638 aa6.84□□□□□ -1.31
HDDC2-207ENST00000608532 NLGN1Q8N2Q7 840 aa6.84□□□□□ -1.31
HDDC2-207ENST00000608532 PMFBP1Q8TBY8 1022 aa6.84□□□□□ -1.31
HDDC2-207ENST00000608532 NBPF4Q96M43 638 aa6.84□□□□□ -1.31
HDDC2-207ENST00000608532 PHF20Q9BVI0 1012 aa6.84□□□□□ -1.31
HDDC2-207ENST00000608532 SPATA9Q9BWV2 254 aa6.84□□□□□ -1.31
HDDC2-207ENST00000608532 SIRPGQ9P1W8 387 aa6.84□□□□□ -1.31
HDDC2-207ENST00000608532 PALD1Q9ULE6 856 aa6.84□□□□□ -1.31
HDDC2-207ENST00000608532 PMF1-BGLAPU3KQ54 211 aa6.84□□□□□ -1.31
HDDC2-207ENST00000608532 FGFR1P11362 822 aa6.83□□□□□ -1.32
HDDC2-207ENST00000608532 SSRP1Q08945 709 aaKnown RBP6.83□□□□□ -1.32
HDDC2-207ENST00000608532 IFRD2Q12894 506 aaPredicted RBP6.83□□□□□ -1.32
HDDC2-207ENST00000608532 RASGRF1Q13972 1273 aa6.83□□□□□ -1.32
HDDC2-207ENST00000608532 TESK1Q15569 626 aa6.83□□□□□ -1.32
HDDC2-207ENST00000608532 MILR1Q7Z6M3 343 aa6.83□□□□□ -1.32
HDDC2-207ENST00000608532 SEC14L1Q92503 715 aa6.83□□□□□ -1.32
HDDC2-207ENST00000608532 OSBP2Q969R2 916 aa6.83□□□□□ -1.32
HDDC2-207ENST00000608532 CDC6Q99741 560 aa6.83□□□□□ -1.32
HDDC2-207ENST00000608532 MSRB2Q9Y3D2 182 aa6.83□□□□□ -1.32
HDDC2-207ENST00000608532 MSCO60682 206 aa6.82□□□□□ -1.32
HDDC2-207ENST00000608532 SF3A1Q15459 793 aaKnown RBP6.82□□□□□ -1.32
HDDC2-207ENST00000608532 KCNT2Q6UVM3 1135 aa6.82□□□□□ -1.32
HDDC2-207ENST00000608532 B3GNT8Q7Z7M8 397 aa6.82□□□□□ -1.32
HDDC2-207ENST00000608532 RIOX2Q8IUF8 465 aa6.82□□□□□ -1.32
HDDC2-207ENST00000608532 SMARCC2Q8TAQ2 1214 aa6.82□□□□□ -1.32
HDDC2-207ENST00000608532 CCDC113Q9H0I3 377 aa6.82□□□□□ -1.32
HDDC2-207ENST00000608532 ZCCHC4Q9H5U6 513 aa6.82□□□□□ -1.32
HDDC2-207ENST00000608532 X6R8D5 127 aa6.82□□□□□ -1.32
HDDC2-207ENST00000608532 ARID1BQ8NFD5 2236 aaPredicted RBP6.82□□□□□ -1.32
HDDC2-207ENST00000608532 H7BY64 318 aa6.81□□□□□ -1.32
HDDC2-207ENST00000608532 DIAPH1O60610 1272 aaKnown RBP6.81□□□□□ -1.32
HDDC2-207ENST00000608532 PLA2G1BP04054 148 aaKnown RBP6.81□□□□□ -1.32
HDDC2-207ENST00000608532 CACNB2Q08289 660 aaPredicted RBP6.81□□□□□ -1.32
HDDC2-207ENST00000608532 DCAF4Q8WV16 495 aa6.81□□□□□ -1.32
HDDC2-207ENST00000608532 ARMC5Q96C12 935 aa6.81□□□□□ -1.32
HDDC2-207ENST00000608532 DDX11Q96FC9 970 aa6.81□□□□□ -1.32
HDDC2-207ENST00000608532 IPO9Q96P70 1041 aaKnown RBP6.81□□□□□ -1.32
HDDC2-207ENST00000608532 YIPF4Q9BSR8 244 aa6.81□□□□□ -1.32
HDDC2-207ENST00000608532 JAM3Q9BX67 310 aa6.81□□□□□ -1.32
HDDC2-207ENST00000608532 GPR27Q9NS67 375 aa6.81□□□□□ -1.32
HDDC2-207ENST00000608532 PPARGC1AQ9UBK2 798 aaKnown RBP6.81□□□□□ -1.32
HDDC2-207ENST00000608532 NPFFR2Q9Y5X5 522 aa6.81□□□□□ -1.32
HDDC2-207ENST00000608532 TRIM13O60858 407 aa6.8□□□□□ -1.32
HDDC2-207ENST00000608532 DGKIO75912 1065 aa6.8□□□□□ -1.32
HDDC2-207ENST00000608532 INHBBP09529 407 aa6.8□□□□□ -1.32
HDDC2-207ENST00000608532 STAT5AP42229 794 aa6.8□□□□□ -1.32
HDDC2-207ENST00000608532 SLC6A11P48066 632 aa6.8□□□□□ -1.32
HDDC2-207ENST00000608532 NTRK3Q16288 839 aa6.8□□□□□ -1.32
HDDC2-207ENST00000608532 STEAP3Q658P3 488 aa6.8□□□□□ -1.32
HDDC2-207ENST00000608532 CD300LDQ6UXZ3 194 aa6.8□□□□□ -1.32
HDDC2-207ENST00000608532 ETV3LQ6ZN32 361 aa6.8□□□□□ -1.32
HDDC2-207ENST00000608532 ADGRG2Q8IZP9 1017 aa6.8□□□□□ -1.32
HDDC2-207ENST00000608532 Q8N1Y9 231 aa6.8□□□□□ -1.32
HDDC2-207ENST00000608532 FAM26EQ8N5C1 309 aa6.8□□□□□ -1.32
HDDC2-207ENST00000608532 FNIP1Q8TF40 1166 aa6.8□□□□□ -1.32
HDDC2-207ENST00000608532 ZNF669Q96BR6 464 aaPredicted RBP6.8□□□□□ -1.32
HDDC2-207ENST00000608532 NOX5Q96PH1 765 aa6.8□□□□□ -1.32
HDDC2-207ENST00000608532 DEPDC7Q96QD5 511 aa6.8□□□□□ -1.32
HDDC2-207ENST00000608532 DNAJC2Q99543 621 aaKnown RBP6.8□□□□□ -1.32
HDDC2-207ENST00000608532 KDM2BQ8NHM5 1336 aa6.79□□□□□ -1.32
HDDC2-207ENST00000608532 FAM221BA6H8Z2 402 aa6.79□□□□□ -1.32
HDDC2-207ENST00000608532 HGSO14964 777 aaPredicted RBP6.79□□□□□ -1.32
HDDC2-207ENST00000608532 CYP2C8P10632 490 aa6.79□□□□□ -1.32
HDDC2-207ENST00000608532 RBL2Q08999 1139 aa6.79□□□□□ -1.32
HDDC2-207ENST00000608532 CHRNA2Q15822 529 aa6.79□□□□□ -1.32
HDDC2-207ENST00000608532 CPA5Q8WXQ8 436 aa6.79□□□□□ -1.32
HDDC2-207ENST00000608532 SRPK1Q96SB4 655 aaKnown RBP6.79□□□□□ -1.32
HDDC2-207ENST00000608532 KCNJ15Q99712 375 aa6.79□□□□□ -1.32
HDDC2-207ENST00000608532 SYT3Q9BQG1 590 aa6.79□□□□□ -1.32
HDDC2-207ENST00000608532 EPB41L1Q9H4G0 881 aa6.79□□□□□ -1.32
HDDC2-207ENST00000608532 PCDHB4Q9Y5E5 795 aa6.79□□□□□ -1.32
HDDC2-207ENST00000608532 TRBV23-1A0A0A0MS06 115 aa6.78□□□□□ -1.32
HDDC2-207ENST00000608532 A0A1B0GTL3 188 aa6.78□□□□□ -1.32
HDDC2-207ENST00000608532 FFAR3O14843 346 aa6.78□□□□□ -1.32
HDDC2-207ENST00000608532 ADCY3O60266 1144 aa6.78□□□□□ -1.32
HDDC2-207ENST00000608532 C8BP07358 591 aa6.78□□□□□ -1.32
HDDC2-207ENST00000608532 FAM153BP0C7A2 387 aa6.78□□□□□ -1.32
HDDC2-207ENST00000608532 SMAD4Q13485 552 aaKnown RBP6.78□□□□□ -1.32
HDDC2-207ENST00000608532 SERINC3Q13530 473 aa6.78□□□□□ -1.32
HDDC2-207ENST00000608532 FAM209AQ5JX71 171 aa6.78□□□□□ -1.32
HDDC2-207ENST00000608532 RSPO2Q6UXX9 243 aaPredicted RBP6.78□□□□□ -1.32
HDDC2-207ENST00000608532 STK32CQ86UX6 486 aa6.78□□□□□ -1.32
HDDC2-207ENST00000608532 ZC3H18Q86VM9 953 aaKnown RBP6.78□□□□□ -1.32
HDDC2-207ENST00000608532 LINC01356Q8N9X3 169 aa6.78□□□□□ -1.32
HDDC2-207ENST00000608532 ZBTB8AQ96BR9 441 aa6.78□□□□□ -1.32
HDDC2-207ENST00000608532 PARD6AQ9NPB6 346 aa6.78□□□□□ -1.32
HDDC2-207ENST00000608532 SNTG2Q9NY99 539 aa6.78□□□□□ -1.32
HDDC2-207ENST00000608532 TRAF6Q9Y4K3 522 aa6.78□□□□□ -1.32
HDDC2-207ENST00000608532 SASH1O94885 1247 aa6.77□□□□□ -1.33
HDDC2-207ENST00000608532 RASA3Q14644 834 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms