RNA–Protein interactions for RNA: ENST00000608425.5

CTCFL-217, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-217ENST00000608425 TAF1DQ9H5J8 278 aaPredicted RBP13.09□□□□□ -0.31
CTCFL-217ENST00000608425 ZWILCHQ9H900 591 aa13.09□□□□□ -0.31
CTCFL-217ENST00000608425 EPB41L5Q9HCM4 733 aa13.09□□□□□ -0.31
CTCFL-217ENST00000608425 FECHP22830 423 aa13.09□□□□□ -0.31
CTCFL-217ENST00000608425 PLA2G12BQ9BX93 195 aa13.09□□□□□ -0.31
CTCFL-217ENST00000608425 RBM12Q9NTZ6 932 aaKnown RBP13.09□□□□□ -0.31
CTCFL-217ENST00000608425 HMGB1P1B2RPK0 211 aaPredicted RBP13.08□□□□□ -0.32
CTCFL-217ENST00000608425 HGSO14964 777 aaPredicted RBP13.08□□□□□ -0.32
CTCFL-217ENST00000608425 SPATA31D3P0C874 917 aa13.08□□□□□ -0.32
CTCFL-217ENST00000608425 GUCY2DQ02846 1103 aa13.08□□□□□ -0.32
CTCFL-217ENST00000608425 RNASELQ05823 741 aaKnown RBP13.08□□□□□ -0.32
CTCFL-217ENST00000608425 KIF6Q6ZMV9 814 aa13.08□□□□□ -0.32
CTCFL-217ENST00000608425 SPATA31D4Q6ZUB0 917 aa13.08□□□□□ -0.32
CTCFL-217ENST00000608425 KIFAP3Q92845 792 aa13.08□□□□□ -0.32
CTCFL-217ENST00000608425 MS4A14Q96JA4 679 aa13.08□□□□□ -0.32
CTCFL-217ENST00000608425 DBNDD2Q9BQY9 259 aa13.08□□□□□ -0.32
CTCFL-217ENST00000608425 HAUS4Q9H6D7 363 aa13.08□□□□□ -0.32
CTCFL-217ENST00000608425 TMBIM4Q9HC24 238 aa13.08□□□□□ -0.32
CTCFL-217ENST00000608425 SERTAD1Q9UHV2 236 aa13.08□□□□□ -0.32
CTCFL-217ENST00000608425 ASAP1Q9ULH1 1129 aa13.08□□□□□ -0.32
CTCFL-217ENST00000608425 GOLGA6L10A6NI86 522 aa13.08□□□□□ -0.32
CTCFL-217ENST00000608425 EYA2O00167 538 aa13.08□□□□□ -0.32
CTCFL-217ENST00000608425 NCK2O43639 380 aa13.08□□□□□ -0.32
CTCFL-217ENST00000608425 SHBGP04278 402 aa13.08□□□□□ -0.32
CTCFL-217ENST00000608425 PALB2Q86YC2 1186 aa13.08□□□□□ -0.32
CTCFL-217ENST00000608425 IQCGQ9H095 443 aaKnown RBP13.08□□□□□ -0.32
CTCFL-217ENST00000608425 BZW2Q9Y6E2 419 aaKnown RBP13.08□□□□□ -0.32
CTCFL-217ENST00000608425 NUP98P52948 1817 aa13.07□□□□□ -0.32
CTCFL-217ENST00000608425 UBOX5O94941 541 aa13.07□□□□□ -0.32
CTCFL-217ENST00000608425 POSTNQ15063 836 aa13.07□□□□□ -0.32
CTCFL-217ENST00000608425 USPL1Q5W0Q7 1092 aa13.07□□□□□ -0.32
CTCFL-217ENST00000608425 DNAJC10Q8IXB1 793 aa13.07□□□□□ -0.32
CTCFL-217ENST00000608425 MYH10P35580 1976 aa13.07□□□□□ -0.32
CTCFL-217ENST00000608425 SH3TC1Q8TE82 1336 aa13.07□□□□□ -0.32
CTCFL-217ENST00000608425 LTBP4Q8N2S1 1624 aa13.07□□□□□ -0.32
CTCFL-217ENST00000608425 PCCAP05165 728 aaPredicted RBP13.07□□□□□ -0.32
CTCFL-217ENST00000608425 DNA2P51530 1060 aa13.07□□□□□ -0.32
CTCFL-217ENST00000608425 VAV2P52735 878 aa13.07□□□□□ -0.32
CTCFL-217ENST00000608425 NCALDP61601 193 aa13.07□□□□□ -0.32
CTCFL-217ENST00000608425 KIF23Q02241 960 aaPredicted RBP13.07□□□□□ -0.32
CTCFL-217ENST00000608425 MORC3Q14149 939 aa13.07□□□□□ -0.32
CTCFL-217ENST00000608425 ZRSR2Q15696 482 aaKnown RBP13.07□□□□□ -0.32
CTCFL-217ENST00000608425 RESP18Q5W5W9 173 aa13.07□□□□□ -0.32
CTCFL-217ENST00000608425 C8orf74Q6P047 294 aa13.07□□□□□ -0.32
CTCFL-217ENST00000608425 CCDC197Q8NCU1 140 aa13.07□□□□□ -0.32
CTCFL-217ENST00000608425 FGD4Q96M96 766 aa13.07□□□□□ -0.32
CTCFL-217ENST00000608425 NOVA2Q9UNW9 492 aaKnown RBP13.07□□□□□ -0.32
CTCFL-217ENST00000608425 NWD2Q9ULI1 1742 aa13.07□□□□□ -0.32
CTCFL-217ENST00000608425 MAP3K15Q6ZN16 1313 aa13.07□□□□□ -0.32
CTCFL-217ENST00000608425 PHLPP1O60346 1717 aa13.06□□□□□ -0.32
CTCFL-217ENST00000608425 GFPT2O94808 682 aa13.06□□□□□ -0.32
CTCFL-217ENST00000608425 CYP11B2P19099 503 aa13.06□□□□□ -0.32
CTCFL-217ENST00000608425 HLFQ16534 295 aa13.06□□□□□ -0.32
CTCFL-217ENST00000608425 SDCCAG8Q86SQ7 713 aaPredicted RBP13.06□□□□□ -0.32
CTCFL-217ENST00000608425 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.06□□□□□ -0.32
CTCFL-217ENST00000608425 CDCA7Q9BWT1 371 aaPredicted RBP13.06□□□□□ -0.32
CTCFL-217ENST00000608425 TAB2Q9NYJ8 693 aa13.06□□□□□ -0.32
CTCFL-217ENST00000608425 POLR2DO15514 142 aaKnown RBP13.06□□□□□ -0.32
CTCFL-217ENST00000608425 KRT32Q14532 448 aa13.06□□□□□ -0.32
CTCFL-217ENST00000608425 PTF1AQ7RTS3 328 aa13.06□□□□□ -0.32
CTCFL-217ENST00000608425 CCNJLQ8IV13 435 aa13.06□□□□□ -0.32
CTCFL-217ENST00000608425 KBTBD3Q8NAB2 608 aa13.06□□□□□ -0.32
CTCFL-217ENST00000608425 OPTNQ96CV9 577 aa13.06□□□□□ -0.32
CTCFL-217ENST00000608425 MOV10L1Q9BXT6 1211 aaKnown RBP13.06□□□□□ -0.32
CTCFL-217ENST00000608425 RANBP17Q9H2T7 1088 aaKnown RBP13.06□□□□□ -0.32
CTCFL-217ENST00000608425 CAPN6Q9Y6Q1 641 aa13.06□□□□□ -0.32
CTCFL-217ENST00000608425 RREB1Q92766 1687 aa13.06□□□□□ -0.32
CTCFL-217ENST00000608425 MYH7P12883 1935 aa13.06□□□□□ -0.32
CTCFL-217ENST00000608425 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.06□□□□□ -0.32
CTCFL-217ENST00000608425 USP46P62068 366 aa13.06□□□□□ -0.32
CTCFL-217ENST00000608425 PTPAQ15257 358 aa13.06□□□□□ -0.32
CTCFL-217ENST00000608425 OR52E8Q6IFG1 317 aa13.06□□□□□ -0.32
CTCFL-217ENST00000608425 GIGYF2Q6Y7W6 1299 aaKnown RBP13.06□□□□□ -0.32
CTCFL-217ENST00000608425 DDX46Q7L014 1031 aaKnown RBP13.06□□□□□ -0.32
CTCFL-217ENST00000608425 DHX32Q7L7V1 743 aaKnown RBP13.06□□□□□ -0.32
CTCFL-217ENST00000608425 ZBTB38Q8NAP3 1195 aaPredicted RBP13.06□□□□□ -0.32
CTCFL-217ENST00000608425 CASKIN2Q8WXE0 1202 aa13.06□□□□□ -0.32
CTCFL-217ENST00000608425 ELAC2Q9BQ52 826 aaKnown RBP13.06□□□□□ -0.32
CTCFL-217ENST00000608425 MLXIPQ9HAP2 919 aa13.06□□□□□ -0.32
CTCFL-217ENST00000608425 SNX12Q9UMY4 172 aa13.06□□□□□ -0.32
CTCFL-217ENST00000608425 TTC26A0AVF1 554 aa13.05□□□□□ -0.32
CTCFL-217ENST00000608425 HEXIM1O94992 359 aaKnown RBP13.05□□□□□ -0.32
CTCFL-217ENST00000608425 RARAP10276 462 aa13.05□□□□□ -0.32
CTCFL-217ENST00000608425 NAT1P18440 290 aa13.05□□□□□ -0.32
CTCFL-217ENST00000608425 PLCD1P51178 756 aa13.05□□□□□ -0.32
CTCFL-217ENST00000608425 RNASE9P60153 205 aaKnown RBP13.05□□□□□ -0.32
CTCFL-217ENST00000608425 DPYDQ12882 1025 aa13.05□□□□□ -0.32
CTCFL-217ENST00000608425 TAX1BP1Q86VP1 789 aa13.05□□□□□ -0.32
CTCFL-217ENST00000608425 PPP1R12CQ9BZL4 782 aa13.05□□□□□ -0.32
CTCFL-217ENST00000608425 ECT2Q9H8V3 914 aa13.05□□□□□ -0.32
CTCFL-217ENST00000608425 MYH13Q9UKX3 1938 aa13.05□□□□□ -0.32
CTCFL-217ENST00000608425 MAGOHP61326 146 aaKnown RBP13.05□□□□□ -0.32
CTCFL-217ENST00000608425 DEUP1Q05D60 604 aa13.05□□□□□ -0.32
CTCFL-217ENST00000608425 SFSWAPQ12872 951 aaKnown RBP13.05□□□□□ -0.32
CTCFL-217ENST00000608425 WDR59Q6PJI9 974 aa13.05□□□□□ -0.32
CTCFL-217ENST00000608425 FAM47EQ6ZV65 393 aa13.05□□□□□ -0.32
CTCFL-217ENST00000608425 USP49Q70CQ1 688 aa13.05□□□□□ -0.32
CTCFL-217ENST00000608425 TMEM110Q86TL2 294 aa13.05□□□□□ -0.32
CTCFL-217ENST00000608425 FAM114A1Q8IWE2 563 aa13.05□□□□□ -0.32
CTCFL-217ENST00000608425 CD302Q8IX05 232 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms