RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 SOD2P04179 222 aa5.68□□□□□ -1.5
RNU6-88P-201ENST00000606801 GLI1P08151 1106 aa5.68□□□□□ -1.5
RNU6-88P-201ENST00000606801 GLI4P10075 376 aa5.68□□□□□ -1.5
RNU6-88P-201ENST00000606801 SDHBP21912 280 aa5.68□□□□□ -1.5
RNU6-88P-201ENST00000606801 GTF2A2P52657 109 aa5.68□□□□□ -1.5
RNU6-88P-201ENST00000606801 CYP4F8P98187 520 aa5.68□□□□□ -1.5
RNU6-88P-201ENST00000606801 LZTR1Q8N653 840 aa5.68□□□□□ -1.5
RNU6-88P-201ENST00000606801 MFSD3Q96ES6 412 aa5.68□□□□□ -1.5
RNU6-88P-201ENST00000606801 TMEM169Q96HH4 297 aa5.68□□□□□ -1.5
RNU6-88P-201ENST00000606801 INTS7Q9NVH2 962 aaKnown RBP5.68□□□□□ -1.5
RNU6-88P-201ENST00000606801 CLDND1Q9NY35 253 aa5.68□□□□□ -1.5
RNU6-88P-201ENST00000606801 FAM53CQ9NYF3 392 aa5.68□□□□□ -1.5
RNU6-88P-201ENST00000606801 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.68□□□□□ -1.5
RNU6-88P-201ENST00000606801 TCRBV5S4A2TA0A5A2 114 aa5.67□□□□□ -1.5
RNU6-88P-201ENST00000606801 GSG1L2A8MUP6 293 aa5.67□□□□□ -1.5
RNU6-88P-201ENST00000606801 MYO1BO43795 1136 aa5.67□□□□□ -1.5
RNU6-88P-201ENST00000606801 DBHP09172 617 aa5.67□□□□□ -1.5
RNU6-88P-201ENST00000606801 RAC2P15153 192 aa5.67□□□□□ -1.5
RNU6-88P-201ENST00000606801 PAK1Q13153 545 aa5.67□□□□□ -1.5
RNU6-88P-201ENST00000606801 KIZQ2M2Z5 673 aa5.67□□□□□ -1.5
RNU6-88P-201ENST00000606801 HABP4Q5JVS0 413 aaKnown RBP5.67□□□□□ -1.5
RNU6-88P-201ENST00000606801 MTDHQ86UE4 582 aaKnown RBP5.67□□□□□ -1.5
RNU6-88P-201ENST00000606801 LRRTM3Q86VH5 581 aa5.67□□□□□ -1.5
RNU6-88P-201ENST00000606801 THNSL2Q86YJ6 484 aa5.67□□□□□ -1.5
RNU6-88P-201ENST00000606801 DDX1Q92499 740 aaKnown RBP5.67□□□□□ -1.5
RNU6-88P-201ENST00000606801 TRMT2BQ96GJ1 504 aaKnown RBP5.67□□□□□ -1.5
RNU6-88P-201ENST00000606801 LIN37Q96GY3 246 aaPredicted RBP5.67□□□□□ -1.5
RNU6-88P-201ENST00000606801 CHAMP1Q96JM3 812 aa5.67□□□□□ -1.5
RNU6-88P-201ENST00000606801 TARS2Q9BW92 718 aaKnown RBP5.67□□□□□ -1.5
RNU6-88P-201ENST00000606801 MAGEC2Q9UBF1 373 aaPredicted RBP5.67□□□□□ -1.5
RNU6-88P-201ENST00000606801 LRRC10BA6NIK2 292 aa5.66□□□□□ -1.5
RNU6-88P-201ENST00000606801 FARP2O94887 1054 aaPredicted RBP5.66□□□□□ -1.5
RNU6-88P-201ENST00000606801 ASLP04424 464 aa5.66□□□□□ -1.5
RNU6-88P-201ENST00000606801 NTRK1P04629 796 aa5.66□□□□□ -1.5
RNU6-88P-201ENST00000606801 SRGAP2CP0DJJ0 459 aa5.66□□□□□ -1.5
RNU6-88P-201ENST00000606801 PYGMP11217 842 aa5.66□□□□□ -1.5
RNU6-88P-201ENST00000606801 MYCLP1P12525 358 aaPredicted RBP5.66□□□□□ -1.5
RNU6-88P-201ENST00000606801 POU3F2P20265 443 aaPredicted RBP5.66□□□□□ -1.5
RNU6-88P-201ENST00000606801 GRK2P25098 689 aa5.66□□□□□ -1.5
RNU6-88P-201ENST00000606801 GRK3P35626 688 aa5.66□□□□□ -1.5
RNU6-88P-201ENST00000606801 ERVFRD-1P60508 538 aa5.66□□□□□ -1.5
RNU6-88P-201ENST00000606801 PCBP1Q15365 356 aaKnown RBP eCLIP5.66□□□□□ -1.5
RNU6-88P-201ENST00000606801 RIOX2Q8IUF8 465 aa5.66□□□□□ -1.5
RNU6-88P-201ENST00000606801 KCNJ15Q99712 375 aa5.66□□□□□ -1.5
RNU6-88P-201ENST00000606801 RXFP1Q9HBX9 757 aa5.66□□□□□ -1.5
RNU6-88P-201ENST00000606801 CBLCQ9ULV8 474 aa5.66□□□□□ -1.5
RNU6-88P-201ENST00000606801 COQ6Q9Y2Z9 468 aa5.66□□□□□ -1.5
RNU6-88P-201ENST00000606801 SIT1Q9Y3P8 196 aa5.66□□□□□ -1.5
RNU6-88P-201ENST00000606801 HCFC2Q9Y5Z7 792 aa5.66□□□□□ -1.5
RNU6-88P-201ENST00000606801 NKRFO15226 690 aaKnown RBP eCLIP5.65□□□□□ -1.5
RNU6-88P-201ENST00000606801 SGSM2O43147 1006 aa5.65□□□□□ -1.5
RNU6-88P-201ENST00000606801 OPA1O60313 960 aa5.65□□□□□ -1.5
RNU6-88P-201ENST00000606801 CLSTN1O94985 981 aa5.65□□□□□ -1.5
RNU6-88P-201ENST00000606801 AMY2AP04746 511 aa5.65□□□□□ -1.5
RNU6-88P-201ENST00000606801 C8AP07357 584 aa5.65□□□□□ -1.5
RNU6-88P-201ENST00000606801 VIL1P09327 827 aaKnown RBP5.65□□□□□ -1.5
RNU6-88P-201ENST00000606801 COL6A2P12110 1019 aa5.65□□□□□ -1.5
RNU6-88P-201ENST00000606801 YBX3P16989 372 aaKnown RBP eCLIP5.65□□□□□ -1.5
RNU6-88P-201ENST00000606801 AMY2BP19961 511 aa5.65□□□□□ -1.5
RNU6-88P-201ENST00000606801 POU3F3P20264 500 aaPredicted RBP5.65□□□□□ -1.5
RNU6-88P-201ENST00000606801 IGFALSP35858 605 aa5.65□□□□□ -1.5
RNU6-88P-201ENST00000606801 MESP2Q0VG99 397 aa5.65□□□□□ -1.5
RNU6-88P-201ENST00000606801 MLANAQ16655 118 aa5.65□□□□□ -1.5
RNU6-88P-201ENST00000606801 CDCA2Q69YH5 1023 aaPredicted RBP5.65□□□□□ -1.5
RNU6-88P-201ENST00000606801 WWC2Q6AWC2 1192 aa5.65□□□□□ -1.5
RNU6-88P-201ENST00000606801 CNNM4Q6P4Q7 775 aa5.65□□□□□ -1.5
RNU6-88P-201ENST00000606801 C16orf59Q7L2K0 433 aa5.65□□□□□ -1.5
RNU6-88P-201ENST00000606801 OVCH1Q7RTY7 1134 aa5.65□□□□□ -1.5
RNU6-88P-201ENST00000606801 RNF180Q86T96 592 aa5.65□□□□□ -1.5
RNU6-88P-201ENST00000606801 SH3RF2Q8TEC5 729 aa5.65□□□□□ -1.5
RNU6-88P-201ENST00000606801 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.65□□□□□ -1.5
RNU6-88P-201ENST00000606801 INTS4Q96HW7 963 aaKnown RBP5.65□□□□□ -1.5
RNU6-88P-201ENST00000606801 ALG1Q9BT22 464 aa5.65□□□□□ -1.5
RNU6-88P-201ENST00000606801 FAM126AQ9BYI3 521 aaPredicted RBP5.65□□□□□ -1.5
RNU6-88P-201ENST00000606801 IFT57Q9NWB7 429 aa5.65□□□□□ -1.5
RNU6-88P-201ENST00000606801 KLHL14Q9P2G3 628 aa5.65□□□□□ -1.5
RNU6-88P-201ENST00000606801 A0A1W2PQ27 194 aa5.64□□□□□ -1.51
RNU6-88P-201ENST00000606801 A0A1W2PQ64 194 aa5.64□□□□□ -1.51
RNU6-88P-201ENST00000606801 A0A1W2PQC6 194 aa5.64□□□□□ -1.51
RNU6-88P-201ENST00000606801 A0A1W2PQD8 194 aa5.64□□□□□ -1.51
RNU6-88P-201ENST00000606801 ZC3H12DA2A288 527 aaKnown RBP5.64□□□□□ -1.51
RNU6-88P-201ENST00000606801 FAM47E-STBD1D6RA91 191 aa5.64□□□□□ -1.51
RNU6-88P-201ENST00000606801 TRAF5O00463 557 aa5.64□□□□□ -1.51
RNU6-88P-201ENST00000606801 SRGAP3O43295 1099 aa5.64□□□□□ -1.51
RNU6-88P-201ENST00000606801 GLRX3O76003 335 aaKnown RBP5.64□□□□□ -1.51
RNU6-88P-201ENST00000606801 JMJD7P0C870 316 aa5.64□□□□□ -1.51
RNU6-88P-201ENST00000606801 NAT1P18440 290 aa5.64□□□□□ -1.51
RNU6-88P-201ENST00000606801 CANXP27824 592 aaKnown RBP5.64□□□□□ -1.51
RNU6-88P-201ENST00000606801 MECP2P51608 486 aaKnown RBP5.64□□□□□ -1.51
RNU6-88P-201ENST00000606801 SEPT7Q16181 437 aaKnown RBP5.64□□□□□ -1.51
RNU6-88P-201ENST00000606801 ZNF648Q5T619 568 aaPredicted RBP5.64□□□□□ -1.51
RNU6-88P-201ENST00000606801 LCE3BQ5TA77 95 aa5.64□□□□□ -1.51
RNU6-88P-201ENST00000606801 MROH9Q5TGP6 573 aa5.64□□□□□ -1.51
RNU6-88P-201ENST00000606801 BICRALQ6AI39 1079 aa5.64□□□□□ -1.51
RNU6-88P-201ENST00000606801 ZCCHC8Q6NZY4 707 aaKnown RBP5.64□□□□□ -1.51
RNU6-88P-201ENST00000606801 MPZL3Q6UWV2 235 aa5.64□□□□□ -1.51
RNU6-88P-201ENST00000606801 OTOP3Q7RTS5 596 aa5.64□□□□□ -1.51
RNU6-88P-201ENST00000606801 IGSF22Q8N9C0 903 aa5.64□□□□□ -1.51
RNU6-88P-201ENST00000606801 USP33Q8TEY7 942 aa5.64□□□□□ -1.51
RNU6-88P-201ENST00000606801 FBXW5Q969U6 566 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms