RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 PBX1P40424 430 aa17.76■□□□□ 0.43
CTSA-214ENST00000606788 ARHGAP4P98171 946 aa17.76■□□□□ 0.43
CTSA-214ENST00000606788 CARD6Q9BX69 1037 aa17.76■□□□□ 0.43
CTSA-214ENST00000606788 LIMA1Q9UHB6 759 aaKnown RBP17.76■□□□□ 0.43
CTSA-214ENST00000606788 FAM86B1E9PN63 330 aa17.75■□□□□ 0.43
CTSA-214ENST00000606788 H7C1D1 291 aa17.75■□□□□ 0.43
CTSA-214ENST00000606788 ZSCAN12O43309 604 aa17.75■□□□□ 0.43
CTSA-214ENST00000606788 MYO1BO43795 1136 aa17.75■□□□□ 0.43
CTSA-214ENST00000606788 TPM1P09493 284 aa17.75■□□□□ 0.43
CTSA-214ENST00000606788 FAM86B2P0C5J1 330 aa17.75■□□□□ 0.43
CTSA-214ENST00000606788 CLK2P49760 499 aaKnown RBP17.75■□□□□ 0.43
CTSA-214ENST00000606788 PABPC4Q13310 644 aaKnown RBP eCLIP17.75■□□□□ 0.432e-8■■□□□ 11.5
CTSA-214ENST00000606788 SYCP1Q15431 976 aa17.75■□□□□ 0.43
CTSA-214ENST00000606788 RAB34Q9BZG1 259 aa17.75■□□□□ 0.43
CTSA-214ENST00000606788 HOMER2Q9NSB8 354 aa17.75■□□□□ 0.43
CTSA-214ENST00000606788 CTIFO43310 598 aaKnown RBP17.75■□□□□ 0.43
CTSA-214ENST00000606788 TBC1D8BQ0IIM8 1120 aa17.75■□□□□ 0.43
CTSA-214ENST00000606788 RAD54LQ92698 747 aa17.75■□□□□ 0.43
CTSA-214ENST00000606788 MYH7BA7E2Y1 1941 aa17.75■□□□□ 0.43
CTSA-214ENST00000606788 TRIM21P19474 475 aaKnown RBP17.75■□□□□ 0.43
CTSA-214ENST00000606788 AMPD3Q01432 767 aa17.75■□□□□ 0.43
CTSA-214ENST00000606788 NOC4LQ9BVI4 516 aaKnown RBP17.75■□□□□ 0.43
CTSA-214ENST00000606788 TANGO6Q9C0B7 1094 aa17.75■□□□□ 0.43
CTSA-214ENST00000606788 PDCL3Q9H2J4 239 aa17.75■□□□□ 0.43
CTSA-214ENST00000606788 PRDM10Q9NQV6 1147 aa17.75■□□□□ 0.43
CTSA-214ENST00000606788 MED24O75448 989 aa17.74■□□□□ 0.43
CTSA-214ENST00000606788 SLU7O95391 586 aaKnown RBP17.74■□□□□ 0.43
CTSA-214ENST00000606788 KCNA3P22001 575 aa17.74■□□□□ 0.43
CTSA-214ENST00000606788 CPXCR1Q8N123 301 aa17.74■□□□□ 0.43
CTSA-214ENST00000606788 DCAF4Q8WV16 495 aa17.74■□□□□ 0.43
CTSA-214ENST00000606788 FAM207AQ9NSI2 230 aaPredicted RBP17.74■□□□□ 0.43
CTSA-214ENST00000606788 ABHD10Q9NUJ1 306 aa17.74■□□□□ 0.43
CTSA-214ENST00000606788 SFI1A8K8P3 1242 aa17.74■□□□□ 0.43
CTSA-214ENST00000606788 FXR2P51116 673 aaKnown RBP eCLIP17.74■□□□□ 0.43
CTSA-214ENST00000606788 CXCL9Q07325 125 aa17.74■□□□□ 0.43
CTSA-214ENST00000606788 KCNB1Q14721 858 aa17.74■□□□□ 0.43
CTSA-214ENST00000606788 ENOX2Q16206 610 aaKnown RBP17.74■□□□□ 0.43
CTSA-214ENST00000606788 MB21D1Q8N884 522 aa17.74■□□□□ 0.43
CTSA-214ENST00000606788 FEZ1Q99689 392 aa17.74■□□□□ 0.43
CTSA-214ENST00000606788 C7orf25Q9BPX7 421 aa17.74■□□□□ 0.43
CTSA-214ENST00000606788 RGL1Q9NZL6 768 aa17.74■□□□□ 0.43
CTSA-214ENST00000606788 GJA3Q9Y6H8 435 aa17.74■□□□□ 0.43
CTSA-214ENST00000606788 DDX39AO00148 427 aaKnown RBP17.73■□□□□ 0.43
CTSA-214ENST00000606788 ZBTB39O15060 712 aa17.73■□□□□ 0.43
CTSA-214ENST00000606788 CCNE1P24864 410 aa17.73■□□□□ 0.43
CTSA-214ENST00000606788 NIM1KQ8IY84 436 aa17.73■□□□□ 0.43
CTSA-214ENST00000606788 COL4A5P29400 1685 aa17.73■□□□□ 0.43
CTSA-214ENST00000606788 hCG_1984214I3L0E3 225 aa17.73■□□□□ 0.43
CTSA-214ENST00000606788 CCDC175P0C221 793 aa17.73■□□□□ 0.43
CTSA-214ENST00000606788 APBA1Q02410 837 aa17.73■□□□□ 0.43
CTSA-214ENST00000606788 GPBP1Q86WP2 473 aa17.73■□□□□ 0.43
CTSA-214ENST00000606788 ZNF713Q8N859 430 aaPredicted RBP17.73■□□□□ 0.43
CTSA-214ENST00000606788 MKL1Q969V6 931 aa17.73■□□□□ 0.43
CTSA-214ENST00000606788 ADGRG1Q9Y653 693 aa17.73■□□□□ 0.43
CTSA-214ENST00000606788 OPLAHO14841 1288 aa17.73■□□□□ 0.43
CTSA-214ENST00000606788 CASQ1P31415 396 aa17.73■□□□□ 0.43
CTSA-214ENST00000606788 HDLBPQ00341 1268 aaKnown RBP17.73■□□□□ 0.43
CTSA-214ENST00000606788 SPAG1Q07617 926 aa17.73■□□□□ 0.43
CTSA-214ENST00000606788 SUPT20HQ8NEM7 779 aa17.73■□□□□ 0.43
CTSA-214ENST00000606788 MTMR8Q96EF0 704 aa17.73■□□□□ 0.43
CTSA-214ENST00000606788 CRACR2AQ9BSW2 395 aa17.73■□□□□ 0.43
CTSA-214ENST00000606788 HDAC9Q9UKV0 1011 aa17.73■□□□□ 0.43
CTSA-214ENST00000606788 ZBTB21Q9ULJ3 1066 aa17.73■□□□□ 0.43
CTSA-214ENST00000606788 STAT2P52630 851 aa17.72■□□□□ 0.43
CTSA-214ENST00000606788 HERC4Q5GLZ8 1057 aaPredicted RBP17.72■□□□□ 0.43
CTSA-214ENST00000606788 ZNF569Q5MCW4 686 aa17.72■□□□□ 0.43
CTSA-214ENST00000606788 CNNM4Q6P4Q7 775 aa17.72■□□□□ 0.43
CTSA-214ENST00000606788 SAMD7Q7Z3H4 446 aa17.72■□□□□ 0.43
CTSA-214ENST00000606788 PIGOQ8TEQ8 1089 aa17.72■□□□□ 0.43
CTSA-214ENST00000606788 IKZF4Q9H2S9 585 aa17.72■□□□□ 0.43
CTSA-214ENST00000606788 FOCADQ5VW36 1801 aa17.72■□□□□ 0.43
CTSA-214ENST00000606788 CNGA4Q8IV77 575 aa17.72■□□□□ 0.43
CTSA-214ENST00000606788 MNS1Q8NEH6 495 aa17.72■□□□□ 0.43
CTSA-214ENST00000606788 MMRN2Q9H8L6 949 aa17.72■□□□□ 0.43
CTSA-214ENST00000606788 PANK4Q9NVE7 773 aa17.72■□□□□ 0.43
CTSA-214ENST00000606788 BCS1LQ9Y276 419 aa17.72■□□□□ 0.43
CTSA-214ENST00000606788 MYO3BQ8WXR4 1341 aa17.72■□□□□ 0.43
CTSA-214ENST00000606788 ARHGAP29Q52LW3 1261 aa17.71■□□□□ 0.43
CTSA-214ENST00000606788 PPP4R3AQ6IN85 833 aa17.71■□□□□ 0.43
CTSA-214ENST00000606788 SMCR8Q8TEV9 937 aaPredicted RBP17.71■□□□□ 0.43
CTSA-214ENST00000606788 SH2D3AQ9BRG2 576 aa17.71■□□□□ 0.43
CTSA-214ENST00000606788 GUCA1BQ9UMX6 200 aa17.71■□□□□ 0.43
CTSA-214ENST00000606788 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.71■□□□□ 0.431e-6■■□□□ 13.6
CTSA-214ENST00000606788 LGALS16A8MUM7 142 aa17.71■□□□□ 0.43
CTSA-214ENST00000606788 ENTPD3O75355 529 aa17.71■□□□□ 0.43
CTSA-214ENST00000606788 PLA2G4BP0C869 781 aa17.71■□□□□ 0.43
CTSA-214ENST00000606788 BAG6P46379 1132 aa17.71■□□□□ 0.43
CTSA-214ENST00000606788 TBC1D10BQ4KMP7 808 aaPredicted RBP17.71■□□□□ 0.43
CTSA-214ENST00000606788 BMP2KQ9NSY1 1161 aaPredicted RBP17.71■□□□□ 0.43
CTSA-214ENST00000606788 PUF60Q9UHX1 559 aaKnown RBP17.71■□□□□ 0.43
CTSA-214ENST00000606788 LUC7L2Q9Y383 392 aaKnown RBP17.71■□□□□ 0.43
CTSA-214ENST00000606788 SIPA1L1O43166 1804 aa17.71■□□□□ 0.42
CTSA-214ENST00000606788 WNT10BO00744 389 aa17.7■□□□□ 0.42
CTSA-214ENST00000606788 EPHB6O15197 1021 aa17.7■□□□□ 0.42
CTSA-214ENST00000606788 CYP27A1Q02318 531 aa17.7■□□□□ 0.42
CTSA-214ENST00000606788 COASYQ13057 564 aa17.7■□□□□ 0.42
CTSA-214ENST00000606788 CTTNQ14247 550 aaKnown RBP17.7■□□□□ 0.42
CTSA-214ENST00000606788 PANX2Q96RD6 677 aa17.7■□□□□ 0.42
CTSA-214ENST00000606788 ARHGEF10LQ9HCE6 1279 aa17.7■□□□□ 0.42
CTSA-214ENST00000606788 TRAF5O00463 557 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms