RNA–Protein interactions for RNA: ENST00000605895.5

RER1-209, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-209ENST00000605895 KIF2BQ8N4N8 673 aa17.01■□□□□ 0.31
RER1-209ENST00000605895 TBC1D5Q92609 795 aa17.01■□□□□ 0.31
RER1-209ENST00000605895 ESR2Q92731 530 aa17.01■□□□□ 0.31
RER1-209ENST00000605895 ZSCAN10Q96SZ4 725 aaPredicted RBP17.01■□□□□ 0.31
RER1-209ENST00000605895 NUP58Q9BVL2 599 aa17.01■□□□□ 0.31
RER1-209ENST00000605895 MTFR1LQ9H019 292 aa17.01■□□□□ 0.31
RER1-209ENST00000605895 STK38LQ9Y2H1 464 aa17.01■□□□□ 0.31
RER1-209ENST00000605895 MYH6P13533 1939 aa17■□□□□ 0.31
RER1-209ENST00000605895 TRAPPC3O43617 180 aa17■□□□□ 0.31
RER1-209ENST00000605895 CTNND1O60716 968 aaKnown RBP17■□□□□ 0.31
RER1-209ENST00000605895 ATP6V1G2O95670 118 aa17■□□□□ 0.31
RER1-209ENST00000605895 ELF3P78545 371 aaPredicted RBP17■□□□□ 0.31
RER1-209ENST00000605895 IFFO1Q0D2I5 559 aa17■□□□□ 0.31
RER1-209ENST00000605895 FUT2Q10981 343 aa17■□□□□ 0.31
RER1-209ENST00000605895 GKAP1Q5VSY0 366 aaPredicted RBP17■□□□□ 0.31
RER1-209ENST00000605895 MARCH10Q8NA82 808 aaPredicted RBP17■□□□□ 0.31
RER1-209ENST00000605895 KCNV2Q8TDN2 545 aa17■□□□□ 0.31
RER1-209ENST00000605895 ZBTB10Q96DT7 871 aa17■□□□□ 0.31
RER1-209ENST00000605895 NDST4Q9H3R1 872 aa17■□□□□ 0.31
RER1-209ENST00000605895 TBC1D7Q9P0N9 293 aa17■□□□□ 0.31
RER1-209ENST00000605895 PNMA2Q9UL42 364 aa17■□□□□ 0.31
RER1-209ENST00000605895 THRAP3Q9Y2W1 955 aaKnown RBP17■□□□□ 0.31
RER1-209ENST00000605895 KCNB1Q14721 858 aa17■□□□□ 0.31
RER1-209ENST00000605895 KIAA0753Q2KHM9 967 aa17■□□□□ 0.31
RER1-209ENST00000605895 TNFRSF25Q93038 417 aa17■□□□□ 0.31
RER1-209ENST00000605895 AMACRQ9UHK6 382 aa17■□□□□ 0.31
RER1-209ENST00000605895 KAT6BQ8WYB5 2073 aa17■□□□□ 0.31
RER1-209ENST00000605895 LMO7Q8WWI1 1683 aa16.99■□□□□ 0.31
RER1-209ENST00000605895 A8MUI8 341 aa16.99■□□□□ 0.31
RER1-209ENST00000605895 ITGA4P13612 1032 aa16.99■□□□□ 0.31
RER1-209ENST00000605895 MKRN4PQ13434 485 aaPredicted RBP16.99■□□□□ 0.31
RER1-209ENST00000605895 SEC23AQ15436 765 aa16.99■□□□□ 0.31
RER1-209ENST00000605895 GIMAP8Q8ND71 665 aaPredicted RBP16.99■□□□□ 0.31
RER1-209ENST00000605895 PLCD4Q9BRC7 762 aa16.99■□□□□ 0.31
RER1-209ENST00000605895 YIPF3Q9GZM5 350 aa16.99■□□□□ 0.31
RER1-209ENST00000605895 SEMA6BQ9H3T3 888 aa16.99■□□□□ 0.31
RER1-209ENST00000605895 TRMT112Q9UI30 125 aaKnown RBP16.99■□□□□ 0.31
RER1-209ENST00000605895 ATP8A1Q9Y2Q0 1164 aa16.99■□□□□ 0.31
RER1-209ENST00000605895 PRPF3O43395 683 aaKnown RBP16.99■□□□□ 0.31
RER1-209ENST00000605895 ELAC2Q9BQ52 826 aaKnown RBP16.99■□□□□ 0.31
RER1-209ENST00000605895 PANK4Q9NVE7 773 aa16.99■□□□□ 0.31
RER1-209ENST00000605895 JAG2Q9Y219 1238 aa16.99■□□□□ 0.31
RER1-209ENST00000605895 DIAPH2O60879 1101 aa16.99■□□□□ 0.31
RER1-209ENST00000605895 KIF4AO95239 1232 aa16.99■□□□□ 0.31
RER1-209ENST00000605895 ANP32DO95626 131 aa16.99■□□□□ 0.31
RER1-209ENST00000605895 SARNPP82979 210 aaKnown RBP16.99■□□□□ 0.31
RER1-209ENST00000605895 RAPGEF1Q13905 1077 aa16.99■□□□□ 0.31
RER1-209ENST00000605895 TMTC2Q8N394 836 aa16.99■□□□□ 0.31
RER1-209ENST00000605895 ZNF526Q8TF50 670 aaPredicted RBP16.99■□□□□ 0.31
RER1-209ENST00000605895 RSRC1Q96IZ7 334 aaKnown RBP16.99■□□□□ 0.31
RER1-209ENST00000605895 TULP1O00294 542 aaPredicted RBP16.98■□□□□ 0.31
RER1-209ENST00000605895 CCNE1P24864 410 aa16.98■□□□□ 0.31
RER1-209ENST00000605895 SLCO1A2P46721 670 aa16.98■□□□□ 0.31
RER1-209ENST00000605895 POLR2FP61218 127 aaKnown RBP16.98■□□□□ 0.31
RER1-209ENST00000605895 PPP2R2AP63151 447 aa16.98■□□□□ 0.31
RER1-209ENST00000605895 CRYMQ14894 314 aa16.98■□□□□ 0.31
RER1-209ENST00000605895 KRT28Q7Z3Y7 464 aa16.98■□□□□ 0.31
RER1-209ENST00000605895 SPICE1Q8N0Z3 855 aa16.98■□□□□ 0.31
RER1-209ENST00000605895 PARD3BQ8TEW8 1205 aa16.98■□□□□ 0.31
RER1-209ENST00000605895 MLXIPLQ9NP71 852 aa16.98■□□□□ 0.31
RER1-209ENST00000605895 SLC12A6Q9UHW9 1150 aa16.98■□□□□ 0.31
RER1-209ENST00000605895 MARF1Q9Y4F3 1742 aaKnown RBP16.98■□□□□ 0.31
RER1-209ENST00000605895 A0A0G2JS52 829 aa16.98■□□□□ 0.31
RER1-209ENST00000605895 A6NNZ2 444 aa16.98■□□□□ 0.31
RER1-209ENST00000605895 IRS4O14654 1257 aaPredicted RBP16.98■□□□□ 0.31
RER1-209ENST00000605895 BMP15O95972 392 aa16.98■□□□□ 0.31
RER1-209ENST00000605895 TECP42680 631 aa16.98■□□□□ 0.31
RER1-209ENST00000605895 DHX9Q08211 1270 aaKnown RBP16.98■□□□□ 0.31
RER1-209ENST00000605895 TUBB8Q3ZCM7 444 aa16.98■□□□□ 0.31
RER1-209ENST00000605895 GLE1Q53GS7 698 aaKnown RBP16.98■□□□□ 0.31
RER1-209ENST00000605895 TAX1BP1Q86VP1 789 aa16.98■□□□□ 0.31
RER1-209ENST00000605895 DZIP3Q86Y13 1208 aaKnown RBP16.98■□□□□ 0.31
RER1-209ENST00000605895 ACTR5Q9H9F9 607 aaPredicted RBP16.98■□□□□ 0.31
RER1-209ENST00000605895 NFAT5O94916 1531 aa16.97■□□□□ 0.31
RER1-209ENST00000605895 CCDC194A0A1B0GVG4 234 aa16.97■□□□□ 0.31
RER1-209ENST00000605895 VIMP08670 466 aaKnown RBP16.97■□□□□ 0.31
RER1-209ENST00000605895 SNX1Q13596 522 aa16.97■□□□□ 0.31
RER1-209ENST00000605895 TXNRD1Q16881 649 aa16.97■□□□□ 0.31
RER1-209ENST00000605895 VWA3BQ502W6 1294 aa16.97■□□□□ 0.31
RER1-209ENST00000605895 PPP4R3AQ6IN85 833 aa16.97■□□□□ 0.31
RER1-209ENST00000605895 FMNL3Q8IVF7 1028 aa16.97■□□□□ 0.31
RER1-209ENST00000605895 MGARPQ8TDB4 240 aa16.97■□□□□ 0.31
RER1-209ENST00000605895 TAF1DQ9H5J8 278 aaPredicted RBP16.97■□□□□ 0.31
RER1-209ENST00000605895 F8W031 263 aaPredicted RBP16.97■□□□□ 0.31
RER1-209ENST00000605895 AP1G2O75843 785 aa16.97■□□□□ 0.31
RER1-209ENST00000605895 SCG2P13521 617 aa16.97■□□□□ 0.31
RER1-209ENST00000605895 KCNJ2P63252 427 aa16.97■□□□□ 0.31
RER1-209ENST00000605895 TROAPQ12815 778 aa16.97■□□□□ 0.31
RER1-209ENST00000605895 CCDC38Q502W7 563 aa16.97■□□□□ 0.31
RER1-209ENST00000605895 CCDC63Q8NA47 563 aa16.97■□□□□ 0.31
RER1-209ENST00000605895 LMBR1Q8WVP7 490 aa16.97■□□□□ 0.31
RER1-209ENST00000605895 TAF4BQ92750 862 aa16.97■□□□□ 0.31
RER1-209ENST00000605895 MEGF6O75095 1541 aa16.97■□□□□ 0.31
RER1-209ENST00000605895 RIC1Q4ADV7 1423 aa16.97■□□□□ 0.31
RER1-209ENST00000605895 RTN2O75298 545 aa16.96■□□□□ 0.31
RER1-209ENST00000605895 MRPL12P52815 198 aaKnown RBP16.96■□□□□ 0.31
RER1-209ENST00000605895 PRPF4BQ13523 1007 aaKnown RBP16.96■□□□□ 0.31
RER1-209ENST00000605895 LETM2Q2VYF4 491 aa16.96■□□□□ 0.31
RER1-209ENST00000605895 TLDC1Q6P9B6 456 aa16.96■□□□□ 0.31
RER1-209ENST00000605895 ARFGAP2Q8N6H7 521 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms