RNA–Protein interactions for RNA: ENST00000604922.1

SH3D19-213, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-213ENST00000604922 SIRPGQ9P1W8 387 aa7.67□□□□□ -1.18
SH3D19-213ENST00000604922 PCDHA2Q9Y5H9 948 aa7.67□□□□□ -1.18
SH3D19-213ENST00000604922 TRAV20A0A0B4J274 112 aa7.66□□□□□ -1.18
SH3D19-213ENST00000604922 ARNTLO00327 626 aa7.66□□□□□ -1.18
SH3D19-213ENST00000604922 PDPK1O15530 556 aa7.66□□□□□ -1.18
SH3D19-213ENST00000604922 FBLN1P23142 703 aa7.66□□□□□ -1.18
SH3D19-213ENST00000604922 FPR2P25090 351 aa7.66□□□□□ -1.18
SH3D19-213ENST00000604922 FOXO4P98177 505 aa7.66□□□□□ -1.18
SH3D19-213ENST00000604922 SF3A1Q15459 793 aaKnown RBP7.66□□□□□ -1.18
SH3D19-213ENST00000604922 RIOX2Q8IUF8 465 aa7.66□□□□□ -1.18
SH3D19-213ENST00000604922 C1orf159Q96HA4 380 aa7.66□□□□□ -1.18
SH3D19-213ENST00000604922 CCDC113Q9H0I3 377 aa7.66□□□□□ -1.18
SH3D19-213ENST00000604922 EPB41L4AQ9HCS5 686 aaPredicted RBP7.66□□□□□ -1.18
SH3D19-213ENST00000604922 SIT1Q9Y3P8 196 aa7.66□□□□□ -1.18
SH3D19-213ENST00000604922 CCDC85CA6NKD9 419 aa7.65□□□□□ -1.18
SH3D19-213ENST00000604922 H7BY64 318 aa7.65□□□□□ -1.18
SH3D19-213ENST00000604922 PRODHO43272 600 aa7.65□□□□□ -1.18
SH3D19-213ENST00000604922 DLX3O60479 287 aa7.65□□□□□ -1.18
SH3D19-213ENST00000604922 FGFR1P11362 822 aa7.65□□□□□ -1.18
SH3D19-213ENST00000604922 PMLP29590 882 aa7.65□□□□□ -1.18
SH3D19-213ENST00000604922 LIMS1P48059 325 aa7.65□□□□□ -1.18
SH3D19-213ENST00000604922 SLC6A11P48066 632 aa7.65□□□□□ -1.18
SH3D19-213ENST00000604922 DENND5AQ6IQ26 1287 aa7.65□□□□□ -1.18
SH3D19-213ENST00000604922 NSMFQ6X4W1 530 aa7.65□□□□□ -1.18
SH3D19-213ENST00000604922 USP53Q70EK8 1073 aa7.65□□□□□ -1.18
SH3D19-213ENST00000604922 BCAS3Q9H6U6 928 aa7.65□□□□□ -1.18
SH3D19-213ENST00000604922 MSRB2Q9Y3D2 182 aa7.65□□□□□ -1.18
SH3D19-213ENST00000604922 X6R8D5 127 aa7.65□□□□□ -1.18
SH3D19-213ENST00000604922 LCP1P13796 627 aa7.64□□□□□ -1.19
SH3D19-213ENST00000604922 ATF2P15336 505 aa7.64□□□□□ -1.19
SH3D19-213ENST00000604922 RASGRF1Q13972 1273 aa7.64□□□□□ -1.19
SH3D19-213ENST00000604922 CHRNA2Q15822 529 aa7.64□□□□□ -1.19
SH3D19-213ENST00000604922 MTERF2Q49AM1 385 aa7.64□□□□□ -1.19
SH3D19-213ENST00000604922 SOGA3Q5TF21 947 aa7.64□□□□□ -1.19
SH3D19-213ENST00000604922 Q8N1Y9 231 aa7.64□□□□□ -1.19
SH3D19-213ENST00000604922 CPA5Q8WXQ8 436 aa7.64□□□□□ -1.19
SH3D19-213ENST00000604922 ARHGEF4Q9NR80 690 aa7.64□□□□□ -1.19
SH3D19-213ENST00000604922 GPR27Q9NS67 375 aa7.64□□□□□ -1.19
SH3D19-213ENST00000604922 CLDND1Q9NY35 253 aa7.64□□□□□ -1.19
SH3D19-213ENST00000604922 PLA2G2DQ9UNK4 145 aa7.64□□□□□ -1.19
SH3D19-213ENST00000604922 NPFFR2Q9Y5X5 522 aa7.64□□□□□ -1.19
SH3D19-213ENST00000604922 CECR2Q9BXF3 1484 aa7.63□□□□□ -1.19
SH3D19-213ENST00000604922 SGSM2O43147 1006 aa7.63□□□□□ -1.19
SH3D19-213ENST00000604922 PABPC1P11940 636 aaKnown RBP7.63□□□□□ -1.19
SH3D19-213ENST00000604922 BMP7P18075 431 aa7.63□□□□□ -1.19
SH3D19-213ENST00000604922 CAP1Q01518 475 aa7.63□□□□□ -1.19
SH3D19-213ENST00000604922 CACNB2Q08289 660 aaPredicted RBP7.63□□□□□ -1.19
SH3D19-213ENST00000604922 IFRD2Q12894 506 aaPredicted RBP7.63□□□□□ -1.19
SH3D19-213ENST00000604922 RSPO2Q6UXX9 243 aaPredicted RBP7.63□□□□□ -1.19
SH3D19-213ENST00000604922 DPH6Q7L8W6 267 aa7.63□□□□□ -1.19
SH3D19-213ENST00000604922 MILR1Q7Z6M3 343 aa7.63□□□□□ -1.19
SH3D19-213ENST00000604922 B3GNT8Q7Z7M8 397 aa7.63□□□□□ -1.19
SH3D19-213ENST00000604922 NLRP10Q86W26 655 aa7.63□□□□□ -1.19
SH3D19-213ENST00000604922 DCAF4Q8WV16 495 aa7.63□□□□□ -1.19
SH3D19-213ENST00000604922 IPO9Q96P70 1041 aaKnown RBP7.63□□□□□ -1.19
SH3D19-213ENST00000604922 SPATA9Q9BWV2 254 aa7.63□□□□□ -1.19
SH3D19-213ENST00000604922 PMF1-BGLAPU3KQ54 211 aa7.63□□□□□ -1.19
SH3D19-213ENST00000604922 MC3RP41968 323 aa7.62□□□□□ -1.19
SH3D19-213ENST00000604922 SSRP1Q08945 709 aaKnown RBP7.62□□□□□ -1.19
SH3D19-213ENST00000604922 RBL2Q08999 1139 aa7.62□□□□□ -1.19
SH3D19-213ENST00000604922 ETV3LQ6ZN32 361 aa7.62□□□□□ -1.19
SH3D19-213ENST00000604922 DDX11Q96FC9 970 aa7.62□□□□□ -1.19
SH3D19-213ENST00000604922 PCDH18Q9HCL0 1135 aa7.62□□□□□ -1.19
SH3D19-213ENST00000604922 HGSO14964 777 aaPredicted RBP7.61□□□□□ -1.19
SH3D19-213ENST00000604922 DGKIO75912 1065 aa7.61□□□□□ -1.19
SH3D19-213ENST00000604922 SPATC1Q76KD6 591 aa7.61□□□□□ -1.19
SH3D19-213ENST00000604922 ZC3H18Q86VM9 953 aaKnown RBP7.61□□□□□ -1.19
SH3D19-213ENST00000604922 LINC01356Q8N9X3 169 aa7.61□□□□□ -1.19
SH3D19-213ENST00000604922 CDC6Q99741 560 aa7.61□□□□□ -1.19
SH3D19-213ENST00000604922 YIPF4Q9BSR8 244 aa7.61□□□□□ -1.19
SH3D19-213ENST00000604922 PHF20Q9BVI0 1012 aa7.61□□□□□ -1.19
SH3D19-213ENST00000604922 EPB41L1Q9H4G0 881 aa7.61□□□□□ -1.19
SH3D19-213ENST00000604922 ZCCHC4Q9H5U6 513 aa7.61□□□□□ -1.19
SH3D19-213ENST00000604922 FBXL7Q9UJT9 491 aa7.61□□□□□ -1.19
SH3D19-213ENST00000604922 PALD1Q9ULE6 856 aa7.61□□□□□ -1.19
SH3D19-213ENST00000604922 NACADO15069 1562 aa7.61□□□□□ -1.19
SH3D19-213ENST00000604922 BICRAQ9NZM4 1560 aa7.61□□□□□ -1.19
SH3D19-213ENST00000604922 MAFKO60675 156 aa7.6□□□□□ -1.19
SH3D19-213ENST00000604922 SASH1O94885 1247 aa7.6□□□□□ -1.19
SH3D19-213ENST00000604922 VMACQ2NL98 169 aa7.6□□□□□ -1.19
SH3D19-213ENST00000604922 SMARCC2Q8TAQ2 1214 aa7.6□□□□□ -1.19
SH3D19-213ENST00000604922 FNIP1Q8TF40 1166 aa7.6□□□□□ -1.19
SH3D19-213ENST00000604922 OSBP2Q969R2 916 aa7.6□□□□□ -1.19
SH3D19-213ENST00000604922 ZFYVE21Q9BQ24 234 aa7.6□□□□□ -1.19
SH3D19-213ENST00000604922 NGRNQ9NPE2 291 aaKnown RBP7.6□□□□□ -1.19
SH3D19-213ENST00000604922 PFDN2Q9UHV9 154 aa7.6□□□□□ -1.19
SH3D19-213ENST00000604922 CC2D2AQ9P2K1 1620 aa7.6□□□□□ -1.19
SH3D19-213ENST00000604922 CYP2C8P10632 490 aa7.59□□□□□ -1.19
SH3D19-213ENST00000604922 STEAP3Q658P3 488 aa7.59□□□□□ -1.19
SH3D19-213ENST00000604922 LRP10Q7Z4F1 713 aa7.59□□□□□ -1.19
SH3D19-213ENST00000604922 SCUBE1Q8IWY4 988 aa7.59□□□□□ -1.19
SH3D19-213ENST00000604922 SP8Q8IXZ3 490 aa7.59□□□□□ -1.19
SH3D19-213ENST00000604922 MARCH10Q8NA82 808 aaPredicted RBP7.59□□□□□ -1.19
SH3D19-213ENST00000604922 KRTAP9-3Q9BYQ3 159 aa7.59□□□□□ -1.19
SH3D19-213ENST00000604922 PARD6AQ9NPB6 346 aa7.59□□□□□ -1.19
SH3D19-213ENST00000604922 ZNF652Q9Y2D9 606 aa7.59□□□□□ -1.19
SH3D19-213ENST00000604922 KRIT1O00522 736 aa7.58□□□□□ -1.2
SH3D19-213ENST00000604922 INHBBP09529 407 aa7.58□□□□□ -1.2
SH3D19-213ENST00000604922 YOD1Q5VVQ6 348 aaPredicted RBP7.58□□□□□ -1.2
SH3D19-213ENST00000604922 CD300LDQ6UXZ3 194 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms