RNA–Protein interactions for RNA: ENST00000604724.5

LINC01235-201, Transcript of long intergenic non-protein coding RNA 1235, humanhuman

TSL 2 BASIC

Gene LINC01235, Length 2,328 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01235-201ENST00000604724 POTECB2RU33 542 aa12.14□□□□□ -0.47
LINC01235-201ENST00000604724 FOSP01100 380 aaPredicted RBP12.14□□□□□ -0.47
LINC01235-201ENST00000604724 AMPD3Q01432 767 aa12.14□□□□□ -0.47
LINC01235-201ENST00000604724 Q4G0T1 1027 aa12.14□□□□□ -0.47
LINC01235-201ENST00000604724 POTEBQ6S5H4 581 aa12.14□□□□□ -0.47
LINC01235-201ENST00000604724 IRF2BP1Q8IU81 584 aa12.14□□□□□ -0.47
LINC01235-201ENST00000604724 EEF2KMTQ96G04 330 aa12.14□□□□□ -0.47
LINC01235-201ENST00000604724 PLA2G6O60733 806 aa12.14□□□□□ -0.47
LINC01235-201ENST00000604724 UBXN2AP68543 259 aa12.14□□□□□ -0.47
LINC01235-201ENST00000604724 TRPM4Q8TD43 1214 aa12.14□□□□□ -0.47
LINC01235-201ENST00000604724 UPF1Q92900 1129 aaKnown RBP eCLIP12.14□□□□□ -0.47
LINC01235-201ENST00000604724 TRMT1Q9NXH9 659 aaKnown RBP12.14□□□□□ -0.47
LINC01235-201ENST00000604724 FEM1BQ9UK73 627 aa12.14□□□□□ -0.47
LINC01235-201ENST00000604724 ZNF536O15090 1300 aa12.13□□□□□ -0.47
LINC01235-201ENST00000604724 KCNJ18B7U540 433 aa12.13□□□□□ -0.47
LINC01235-201ENST00000604724 E9PMD0 336 aa12.13□□□□□ -0.47
LINC01235-201ENST00000604724 MED24O75448 989 aa12.13□□□□□ -0.47
LINC01235-201ENST00000604724 BRD2P25440 801 aaKnown RBP12.13□□□□□ -0.47
LINC01235-201ENST00000604724 PBX1P40424 430 aa12.13□□□□□ -0.47
LINC01235-201ENST00000604724 ADKP55263 362 aaKnown RBP12.13□□□□□ -0.47
LINC01235-201ENST00000604724 KCNJ12Q14500 433 aa12.13□□□□□ -0.47
LINC01235-201ENST00000604724 TCP11X2Q5H9J9 407 aa12.13□□□□□ -0.47
LINC01235-201ENST00000604724 E4F1Q66K89 784 aaPredicted RBP12.13□□□□□ -0.47
LINC01235-201ENST00000604724 MCTP2Q6DN12 878 aa12.13□□□□□ -0.47
LINC01235-201ENST00000604724 TTI2Q6NXR4 508 aa12.13□□□□□ -0.47
LINC01235-201ENST00000604724 SLC30A10Q6XR72 485 aa12.13□□□□□ -0.47
LINC01235-201ENST00000604724 FAM160B2Q86V87 743 aa12.13□□□□□ -0.47
LINC01235-201ENST00000604724 LDHDQ86WU2 507 aa12.13□□□□□ -0.47
LINC01235-201ENST00000604724 CREBRFQ8IUR6 639 aa12.13□□□□□ -0.47
LINC01235-201ENST00000604724 TC2NQ8N9U0 490 aa12.13□□□□□ -0.47
LINC01235-201ENST00000604724 DDX12PQ92771 950 aa12.13□□□□□ -0.47
LINC01235-201ENST00000604724 ZFP91Q96JP5 570 aaPredicted RBP12.13□□□□□ -0.47
LINC01235-201ENST00000604724 AGBL1Q96MI9 1066 aa12.13□□□□□ -0.47
LINC01235-201ENST00000604724 SLC39A2Q9NP94 309 aa12.13□□□□□ -0.47
LINC01235-201ENST00000604724 LIMA1Q9UHB6 759 aaKnown RBP12.13□□□□□ -0.47
LINC01235-201ENST00000604724 KIAA1024Q9UPX6 916 aa12.13□□□□□ -0.47
LINC01235-201ENST00000604724 IGLV3-22A0A075B6J6 115 aa12.12□□□□□ -0.47
LINC01235-201ENST00000604724 PSMA7O14818 248 aa12.12□□□□□ -0.47
LINC01235-201ENST00000604724 MSH4O15457 936 aa12.12□□□□□ -0.47
LINC01235-201ENST00000604724 CIITAP33076 1130 aa12.12□□□□□ -0.47
LINC01235-201ENST00000604724 HYIQ5T013 277 aa12.12□□□□□ -0.47
LINC01235-201ENST00000604724 ANGEL2Q5VTE6 544 aaKnown RBP12.12□□□□□ -0.47
LINC01235-201ENST00000604724 CEP135Q66GS9 1140 aa12.12□□□□□ -0.47
LINC01235-201ENST00000604724 TMEM139Q8IV31 216 aa12.12□□□□□ -0.47
LINC01235-201ENST00000604724 SLFN12Q8IYM2 578 aa12.12□□□□□ -0.47
LINC01235-201ENST00000604724 CCAR2Q8N163 923 aaKnown RBP12.12□□□□□ -0.47
LINC01235-201ENST00000604724 CTAGE1Q96RT6 745 aa12.12□□□□□ -0.47
LINC01235-201ENST00000604724 WDR18Q9BV38 432 aa12.12□□□□□ -0.47
LINC01235-201ENST00000604724 VPS16Q9H269 839 aa12.12□□□□□ -0.47
LINC01235-201ENST00000604724 TMX1Q9H3N1 280 aa12.12□□□□□ -0.47
LINC01235-201ENST00000604724 TAB2Q9NYJ8 693 aa12.12□□□□□ -0.47
LINC01235-201ENST00000604724 POTEFA5A3E0 1075 aa12.12□□□□□ -0.47
LINC01235-201ENST00000604724 GCOM1H8Y6P7 765 aaPredicted RBP12.12□□□□□ -0.47
LINC01235-201ENST00000604724 CTNND1O60716 968 aaKnown RBP12.12□□□□□ -0.47
LINC01235-201ENST00000604724 CYP3A4P08684 503 aa12.12□□□□□ -0.47
LINC01235-201ENST00000604724 POLR2MP0CAP2 368 aa12.12□□□□□ -0.47
LINC01235-201ENST00000604724 POTEIP0CG38 1075 aa12.12□□□□□ -0.47
LINC01235-201ENST00000604724 SEMA3FQ13275 785 aa12.12□□□□□ -0.47
LINC01235-201ENST00000604724 STIM1Q13586 685 aa12.12□□□□□ -0.47
LINC01235-201ENST00000604724 MTMR2Q13614 643 aa12.12□□□□□ -0.47
LINC01235-201ENST00000604724 POTEGQ6S5H5 508 aa12.12□□□□□ -0.47
LINC01235-201ENST00000604724 POTEEQ6S8J3 1075 aa12.12□□□□□ -0.47
LINC01235-201ENST00000604724 UNC13DQ70J99 1090 aa12.12□□□□□ -0.47
LINC01235-201ENST00000604724 GLIS3Q8NEA6 775 aa12.12□□□□□ -0.47
LINC01235-201ENST00000604724 TRIM47Q96LD4 638 aa12.12□□□□□ -0.47
LINC01235-201ENST00000604724 DUSP9Q99956 384 aaKnown RBP12.12□□□□□ -0.47
LINC01235-201ENST00000604724 KDM3AQ9Y4C1 1321 aa12.12□□□□□ -0.47
LINC01235-201ENST00000604724 DOCK1Q14185 1865 aa12.12□□□□□ -0.47
LINC01235-201ENST00000604724 LRRC10BA6NIK2 292 aa12.11□□□□□ -0.47
LINC01235-201ENST00000604724 H7C1D1 291 aa12.11□□□□□ -0.47
LINC01235-201ENST00000604724 IDEP14735 1019 aa12.11□□□□□ -0.47
LINC01235-201ENST00000604724 COPB1P53618 953 aaKnown RBP12.11□□□□□ -0.47
LINC01235-201ENST00000604724 ANKRD40Q6AI12 368 aa12.11□□□□□ -0.47
LINC01235-201ENST00000604724 NCAPH2Q6IBW4 605 aa12.11□□□□□ -0.47
LINC01235-201ENST00000604724 CNNM4Q6P4Q7 775 aa12.11□□□□□ -0.47
LINC01235-201ENST00000604724 ZKSCAN4Q969J2 545 aaPredicted RBP12.11□□□□□ -0.47
LINC01235-201ENST00000604724 CCDC47Q96A33 483 aaKnown RBP12.11□□□□□ -0.47
LINC01235-201ENST00000604724 DNAJC19Q96DA6 116 aa12.11□□□□□ -0.47
LINC01235-201ENST00000604724 SRRTQ9BXP5 876 aaKnown RBP12.11□□□□□ -0.47
LINC01235-201ENST00000604724 KIAA1683Q9H0B3 1180 aa12.11□□□□□ -0.47
LINC01235-201ENST00000604724 VAV3Q9UKW4 847 aa12.11□□□□□ -0.47
LINC01235-201ENST00000604724 N4BP3O15049 544 aa12.11□□□□□ -0.47
LINC01235-201ENST00000604724 TBX3O15119 743 aa12.11□□□□□ -0.47
LINC01235-201ENST00000604724 WDR46O15213 610 aaKnown RBP12.11□□□□□ -0.47
LINC01235-201ENST00000604724 NKRFO15226 690 aaKnown RBP eCLIP12.11□□□□□ -0.47
LINC01235-201ENST00000604724 SSBP05455 408 aaKnown RBP eCLIP12.11□□□□□ -0.47
LINC01235-201ENST00000604724 ZNF76P36508 570 aa12.11□□□□□ -0.47
LINC01235-201ENST00000604724 EHHADHQ08426 723 aa12.11□□□□□ -0.47
LINC01235-201ENST00000604724 CATSPER3Q86XQ3 398 aa12.11□□□□□ -0.47
LINC01235-201ENST00000604724 P2RX5Q93086 422 aa12.11□□□□□ -0.47
LINC01235-201ENST00000604724 DHTKD1Q96HY7 919 aaPredicted RBP12.11□□□□□ -0.47
LINC01235-201ENST00000604724 SLF1Q9BQI6 1058 aa12.11□□□□□ -0.47
LINC01235-201ENST00000604724 NT5C3AQ9H0P0 336 aa12.11□□□□□ -0.47
LINC01235-201ENST00000604724 CCPG1Q9ULG6 757 aa12.11□□□□□ -0.47
LINC01235-201ENST00000604724 MRPL11Q9Y3B7 192 aaKnown RBP12.11□□□□□ -0.47
LINC01235-201ENST00000604724 NPHP3-ACAD11A0A0J9YXS1 232 aa12.1□□□□□ -0.47
LINC01235-201ENST00000604724 PVALEFA0A1B0GWK0 134 aa12.1□□□□□ -0.47
LINC01235-201ENST00000604724 NFIBO00712 420 aa12.1□□□□□ -0.47
LINC01235-201ENST00000604724 ICAM1P05362 532 aa12.1□□□□□ -0.47
LINC01235-201ENST00000604724 PLA2G4BP0C869 781 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms