RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 RASGRP4Q8TDF6 673 aa13.72□□□□□ -0.21
CDCA3-212ENST00000604599 LRRC15Q8TF66 581 aa13.72□□□□□ -0.21
CDCA3-212ENST00000604599 NSMCE1Q8WV22 266 aa13.72□□□□□ -0.21
CDCA3-212ENST00000604599 UBLCP1Q8WVY7 318 aaPredicted RBP13.72□□□□□ -0.21
CDCA3-212ENST00000604599 DHTKD1Q96HY7 919 aaPredicted RBP13.72□□□□□ -0.21
CDCA3-212ENST00000604599 RNF41Q9H4P4 317 aaPredicted RBP13.72□□□□□ -0.21
CDCA3-212ENST00000604599 TAF1DQ9H5J8 278 aaPredicted RBP13.72□□□□□ -0.21
CDCA3-212ENST00000604599 ARID4AP29374 1257 aaPredicted RBP13.71□□□□□ -0.21
CDCA3-212ENST00000604599 PDE6BP35913 854 aa13.71□□□□□ -0.21
CDCA3-212ENST00000604599 PPP2R2AP63151 447 aa13.71□□□□□ -0.21
CDCA3-212ENST00000604599 EHHADHQ08426 723 aa13.71□□□□□ -0.21
CDCA3-212ENST00000604599 RASGRF1Q13972 1273 aa13.71□□□□□ -0.21
CDCA3-212ENST00000604599 ZSCAN29Q8IWY8 852 aaPredicted RBP13.71□□□□□ -0.21
CDCA3-212ENST00000604599 VGLL2Q8N8G2 317 aa13.71□□□□□ -0.21
CDCA3-212ENST00000604599 TCP11Q8WWU5 503 aa13.71□□□□□ -0.21
CDCA3-212ENST00000604599 CCT6BQ92526 530 aa13.71□□□□□ -0.21
CDCA3-212ENST00000604599 ESR2Q92731 530 aa13.71□□□□□ -0.21
CDCA3-212ENST00000604599 TATDN2Q93075 761 aa13.71□□□□□ -0.21
CDCA3-212ENST00000604599 ZNF512BQ96KM6 892 aaPredicted RBP13.71□□□□□ -0.21
CDCA3-212ENST00000604599 BICDL2A1A5D9 508 aa13.71□□□□□ -0.21
CDCA3-212ENST00000604599 PDE8BO95263 885 aa13.71□□□□□ -0.21
CDCA3-212ENST00000604599 CSF1RP07333 972 aa13.71□□□□□ -0.21
CDCA3-212ENST00000604599 TRHP20396 242 aaPredicted RBP13.71□□□□□ -0.21
CDCA3-212ENST00000604599 CDC25CP30307 473 aa13.71□□□□□ -0.21
CDCA3-212ENST00000604599 PEX19P40855 299 aa13.71□□□□□ -0.21
CDCA3-212ENST00000604599 UBA7P41226 1012 aa13.71□□□□□ -0.21
CDCA3-212ENST00000604599 BIRC2Q13490 618 aa13.71□□□□□ -0.21
CDCA3-212ENST00000604599 EGFL6Q8IUX8 553 aa13.71□□□□□ -0.21
CDCA3-212ENST00000604599 TSKSQ9UJT2 592 aa13.71□□□□□ -0.21
CDCA3-212ENST00000604599 SIK3Q9Y2K2 1263 aa13.71□□□□□ -0.21
CDCA3-212ENST00000604599 H0YGN5 161 aa13.7□□□□□ -0.22
CDCA3-212ENST00000604599 PJA2O43164 708 aa13.7□□□□□ -0.22
CDCA3-212ENST00000604599 MAGOHP61326 146 aaKnown RBP13.7□□□□□ -0.22
CDCA3-212ENST00000604599 PTPROQ16827 1216 aa13.7□□□□□ -0.22
CDCA3-212ENST00000604599 LACTB2Q53H82 288 aaPredicted RBP13.7□□□□□ -0.22
CDCA3-212ENST00000604599 PNMA8AQ86V59 439 aaPredicted RBP13.7□□□□□ -0.22
CDCA3-212ENST00000604599 MAGOHBQ96A72 148 aaKnown RBP13.7□□□□□ -0.22
CDCA3-212ENST00000604599 INPP4AQ96PE3 977 aaPredicted RBP13.7□□□□□ -0.22
CDCA3-212ENST00000604599 L3MBTL1Q9Y468 752 aa13.7□□□□□ -0.22
CDCA3-212ENST00000604599 NFS1Q9Y697 457 aa13.7□□□□□ -0.22
CDCA3-212ENST00000604599 CLTAP09496 248 aa13.7□□□□□ -0.22
CDCA3-212ENST00000604599 UQCRFS1P1P0C7P4 283 aa13.7□□□□□ -0.22
CDCA3-212ENST00000604599 ECHS1P30084 290 aa13.7□□□□□ -0.22
CDCA3-212ENST00000604599 ASIC1P78348 528 aa13.7□□□□□ -0.22
CDCA3-212ENST00000604599 CHADLQ6NUI6 762 aa13.7□□□□□ -0.22
CDCA3-212ENST00000604599 TOM1L2Q6ZVM7 507 aa13.7□□□□□ -0.22
CDCA3-212ENST00000604599 C3orf20Q8ND61 904 aa13.7□□□□□ -0.22
CDCA3-212ENST00000604599 CUL5Q93034 780 aa13.7□□□□□ -0.22
CDCA3-212ENST00000604599 SPDL1Q96EA4 605 aa13.7□□□□□ -0.22
CDCA3-212ENST00000604599 ZSCAN10Q96SZ4 725 aaPredicted RBP13.7□□□□□ -0.22
CDCA3-212ENST00000604599 NEUROG2Q9H2A3 272 aa13.7□□□□□ -0.22
CDCA3-212ENST00000604599 NDST4Q9H3R1 872 aa13.7□□□□□ -0.22
CDCA3-212ENST00000604599 RNF14Q9UBS8 474 aa13.7□□□□□ -0.22
CDCA3-212ENST00000604599 CNTNAP5Q8WYK1 1306 aa13.7□□□□□ -0.22
CDCA3-212ENST00000604599 CYP2D7A0A087X1C5 515 aa13.7□□□□□ -0.22
CDCA3-212ENST00000604599 C5orf60A6NFR6 353 aa13.7□□□□□ -0.22
CDCA3-212ENST00000604599 CLSTN1O94985 981 aa13.7□□□□□ -0.22
CDCA3-212ENST00000604599 TRAPPC10P48553 1259 aa13.7□□□□□ -0.22
CDCA3-212ENST00000604599 IRX1P78414 480 aaPredicted RBP13.7□□□□□ -0.22
CDCA3-212ENST00000604599 PPP2R5BQ15173 497 aa13.7□□□□□ -0.22
CDCA3-212ENST00000604599 ARL6IP4Q66PJ3 421 aaKnown RBP13.7□□□□□ -0.22
CDCA3-212ENST00000604599 LRIG3Q6UXM1 1119 aa13.7□□□□□ -0.22
CDCA3-212ENST00000604599 DTHD1Q6ZMT9 781 aa13.7□□□□□ -0.22
CDCA3-212ENST00000604599 TMTC3Q6ZXV5 915 aa13.7□□□□□ -0.22
CDCA3-212ENST00000604599 CACNA2D4Q7Z3S7 1137 aa13.7□□□□□ -0.22
CDCA3-212ENST00000604599 SRBD1Q8N5C6 995 aaKnown RBP13.7□□□□□ -0.22
CDCA3-212ENST00000604599 C4orf32Q8N8J7 132 aa13.7□□□□□ -0.22
CDCA3-212ENST00000604599 MDM1Q8TC05 714 aa13.7□□□□□ -0.22
CDCA3-212ENST00000604599 TMEM60Q9H2L4 133 aa13.7□□□□□ -0.22
CDCA3-212ENST00000604599 NLRC4Q9NPP4 1024 aa13.7□□□□□ -0.22
CDCA3-212ENST00000604599 KBTBD4Q9NVX7 518 aa13.7□□□□□ -0.22
CDCA3-212ENST00000604599 FBXL5Q9UKA1 691 aa13.7□□□□□ -0.22
CDCA3-212ENST00000604599 FAM205AQ6ZU69 1335 aa13.7□□□□□ -0.22
CDCA3-212ENST00000604599 MYH7BA7E2Y1 1941 aa13.69□□□□□ -0.22
CDCA3-212ENST00000604599 DNAJC8O75937 253 aaPredicted RBP13.69□□□□□ -0.22
CDCA3-212ENST00000604599 FLT3P36888 993 aa13.69□□□□□ -0.22
CDCA3-212ENST00000604599 TNNC1P63316 161 aa13.69□□□□□ -0.22
CDCA3-212ENST00000604599 TROAPQ12815 778 aa13.69□□□□□ -0.22
CDCA3-212ENST00000604599 HLFQ16534 295 aa13.69□□□□□ -0.22
CDCA3-212ENST00000604599 VWA3BQ502W6 1294 aa13.69□□□□□ -0.22
CDCA3-212ENST00000604599 LRRC4CQ9HCJ2 640 aa13.69□□□□□ -0.22
CDCA3-212ENST00000604599 KLRC1P26715 233 aa13.69□□□□□ -0.22
CDCA3-212ENST00000604599 CALRP27797 417 aaKnown RBP13.69□□□□□ -0.22
CDCA3-212ENST00000604599 ENOX2Q16206 610 aaKnown RBP13.69□□□□□ -0.22
CDCA3-212ENST00000604599 NBPF9Q3BBW0 867 aa13.69□□□□□ -0.22
CDCA3-212ENST00000604599 RUFY4Q6ZNE9 571 aa13.69□□□□□ -0.22
CDCA3-212ENST00000604599 ISCUQ9H1K1 167 aa13.69□□□□□ -0.22
CDCA3-212ENST00000604599 F8W031 263 aaPredicted RBP13.68□□□□□ -0.22
CDCA3-212ENST00000604599 SCG2P13521 617 aa13.68□□□□□ -0.22
CDCA3-212ENST00000604599 SLC8A3P57103 927 aa13.68□□□□□ -0.22
CDCA3-212ENST00000604599 SARNPP82979 210 aaKnown RBP13.68□□□□□ -0.22
CDCA3-212ENST00000604599 BIRC3Q13489 604 aa13.68□□□□□ -0.22
CDCA3-212ENST00000604599 ASTE1Q2TB18 679 aaPredicted RBP13.68□□□□□ -0.22
CDCA3-212ENST00000604599 KRT71Q3SY84 523 aa13.68□□□□□ -0.22
CDCA3-212ENST00000604599 RNF10Q8N5U6 811 aaKnown RBP13.68□□□□□ -0.22
CDCA3-212ENST00000604599 ZBTB38Q8NAP3 1195 aaPredicted RBP13.68□□□□□ -0.22
CDCA3-212ENST00000604599 USP38Q8NB14 1042 aa13.68□□□□□ -0.22
CDCA3-212ENST00000604599 BAP1Q92560 729 aa13.68□□□□□ -0.22
CDCA3-212ENST00000604599 HOOK2Q96ED9 719 aa13.68□□□□□ -0.22
CDCA3-212ENST00000604599 MTA3Q9BTC8 594 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms