RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 TBC1D9Q6ZT07 1266 aa5.24□□□□□ -1.57
LINC01109-201ENST00000603837 ZNF75CPQ92670 426 aaPredicted RBP5.24□□□□□ -1.57
LINC01109-201ENST00000603837 RABGGTAQ92696 567 aa5.24□□□□□ -1.57
LINC01109-201ENST00000603837 XAGE2Q96GT9 111 aa5.24□□□□□ -1.57
LINC01109-201ENST00000603837 RMDN2Q96LZ7 410 aa5.24□□□□□ -1.57
LINC01109-201ENST00000603837 ALS2CR12Q96Q35 445 aa5.24□□□□□ -1.57
LINC01109-201ENST00000603837 DNAAF2Q9NVR5 837 aaKnown RBP5.24□□□□□ -1.57
LINC01109-201ENST00000603837 MAPK8IP1Q9UQF2 711 aa5.24□□□□□ -1.57
LINC01109-201ENST00000603837 INPP5FQ9Y2H2 1132 aa5.24□□□□□ -1.57
LINC01109-201ENST00000603837 TMEM98Q9Y2Y6 226 aa5.24□□□□□ -1.57
LINC01109-201ENST00000603837 ABCC3O15438 1527 aa5.23□□□□□ -1.57
LINC01109-201ENST00000603837 ASXL1Q8IXJ9 1541 aa5.23□□□□□ -1.57
LINC01109-201ENST00000603837 ESYT3A0FGR9 886 aa5.23□□□□□ -1.57
LINC01109-201ENST00000603837 FOXN3O00409 490 aaPredicted RBP5.23□□□□□ -1.57
LINC01109-201ENST00000603837 GFPT2O94808 682 aa5.23□□□□□ -1.57
LINC01109-201ENST00000603837 TUBB4AP04350 444 aa5.23□□□□□ -1.57
LINC01109-201ENST00000603837 IFIT2P09913 472 aaKnown RBP5.23□□□□□ -1.57
LINC01109-201ENST00000603837 SCG2P13521 617 aa5.23□□□□□ -1.57
LINC01109-201ENST00000603837 GCLCP48506 637 aaPredicted RBP5.23□□□□□ -1.57
LINC01109-201ENST00000603837 CLCN2P51788 898 aa5.23□□□□□ -1.57
LINC01109-201ENST00000603837 ROR2Q01974 943 aaKnown RBP5.23□□□□□ -1.57
LINC01109-201ENST00000603837 IDI1Q13907 227 aa5.23□□□□□ -1.57
LINC01109-201ENST00000603837 WTAPQ15007 396 aa5.23□□□□□ -1.57
LINC01109-201ENST00000603837 NUGGCQ68CJ6 796 aa5.23□□□□□ -1.57
LINC01109-201ENST00000603837 TMEM132EQ6IEE7 984 aa5.23□□□□□ -1.57
LINC01109-201ENST00000603837 PPP4R3AQ6IN85 833 aa5.23□□□□□ -1.57
LINC01109-201ENST00000603837 TTLL7Q6ZT98 887 aa5.23□□□□□ -1.57
LINC01109-201ENST00000603837 HDXQ7Z353 690 aa5.23□□□□□ -1.57
LINC01109-201ENST00000603837 LUZP1Q86V48 1076 aa5.23□□□□□ -1.57
LINC01109-201ENST00000603837 AFAP1L1Q8TED9 768 aa5.23□□□□□ -1.57
LINC01109-201ENST00000603837 RBM41Q96IZ5 413 aaKnown RBP5.23□□□□□ -1.57
LINC01109-201ENST00000603837 SCLT1Q96NL6 688 aa5.23□□□□□ -1.57
LINC01109-201ENST00000603837 BRINP2Q9C0B6 783 aa5.23□□□□□ -1.57
LINC01109-201ENST00000603837 EPC1Q9H2F5 836 aa5.23□□□□□ -1.57
LINC01109-201ENST00000603837 FAM204AQ9H8W3 233 aa5.23□□□□□ -1.57
LINC01109-201ENST00000603837 LGR6Q9HBX8 967 aa5.23□□□□□ -1.57
LINC01109-201ENST00000603837 KCND1Q9NSA2 647 aa5.23□□□□□ -1.57
LINC01109-201ENST00000603837 FBXO2Q9UK22 296 aaPredicted RBP5.23□□□□□ -1.57
LINC01109-201ENST00000603837 PCDHGC5Q9Y5F6 944 aa5.23□□□□□ -1.57
LINC01109-201ENST00000603837 ATAD2Q6PL18 1390 aa5.23□□□□□ -1.57
LINC01109-201ENST00000603837 BTBD11A6QL63 1104 aa5.23□□□□□ -1.57
LINC01109-201ENST00000603837 PPP1R12BO60237 982 aaPredicted RBP5.23□□□□□ -1.57
LINC01109-201ENST00000603837 KLHL41O60662 606 aa5.23□□□□□ -1.57
LINC01109-201ENST00000603837 N4BP1O75113 896 aaKnown RBP5.23□□□□□ -1.57
LINC01109-201ENST00000603837 E2F6O75461 281 aa5.23□□□□□ -1.57
LINC01109-201ENST00000603837 TCEA3O75764 348 aa5.23□□□□□ -1.57
LINC01109-201ENST00000603837 CDC25BP30305 580 aa5.23□□□□□ -1.57
LINC01109-201ENST00000603837 KRT20P35900 424 aa5.23□□□□□ -1.57
LINC01109-201ENST00000603837 WDR4P57081 412 aaKnown RBP5.23□□□□□ -1.57
LINC01109-201ENST00000603837 EIF4A2Q14240 407 aaKnown RBP5.23□□□□□ -1.57
LINC01109-201ENST00000603837 VPS72Q15906 364 aa5.23□□□□□ -1.57
LINC01109-201ENST00000603837 SNCBQ16143 134 aa5.23□□□□□ -1.57
LINC01109-201ENST00000603837 PKN1Q16512 942 aa5.23□□□□□ -1.57
LINC01109-201ENST00000603837 LRRFIP1Q32MZ4 808 aaKnown RBP5.23□□□□□ -1.57
LINC01109-201ENST00000603837 MAJINQ3KP22 176 aa5.23□□□□□ -1.57
LINC01109-201ENST00000603837 PPP1R26Q5T8A7 1209 aaPredicted RBP5.23□□□□□ -1.57
LINC01109-201ENST00000603837 CCDC80Q76M96 950 aa5.23□□□□□ -1.57
LINC01109-201ENST00000603837 CATSPER4Q7RTX7 472 aa5.23□□□□□ -1.57
LINC01109-201ENST00000603837 CCDC50Q8IVM0 306 aa5.23□□□□□ -1.57
LINC01109-201ENST00000603837 IFNL3Q8IZI9 196 aa5.23□□□□□ -1.57
LINC01109-201ENST00000603837 GOT1L1Q8NHS2 421 aaPredicted RBP5.23□□□□□ -1.57
LINC01109-201ENST00000603837 TCEANC2Q96MN5 208 aa5.23□□□□□ -1.57
LINC01109-201ENST00000603837 ZMAT2Q96NC0 199 aaKnown RBP5.23□□□□□ -1.57
LINC01109-201ENST00000603837 ALPK1Q96QP1 1244 aa5.23□□□□□ -1.57
LINC01109-201ENST00000603837 C2orf49Q9BVC5 232 aaPredicted RBP5.23□□□□□ -1.57
LINC01109-201ENST00000603837 SLC39A2Q9NP94 309 aa5.23□□□□□ -1.57
LINC01109-201ENST00000603837 EMILIN1Q9Y6C2 1016 aa5.23□□□□□ -1.57
LINC01109-201ENST00000603837 TTC41PQ6P2S7 1318 aa5.23□□□□□ -1.57
LINC01109-201ENST00000603837 KDRP35968 1356 aa5.23□□□□□ -1.57
LINC01109-201ENST00000603837 CCDC151A5D8V7 595 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 CCDC69A6NI79 296 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 LRRC72A6NJI9 287 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 ERVH48-1M5A8F1 160 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 PHACTR2O75167 634 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 RNF8O76064 485 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 URI1O94763 535 aaPredicted RBP5.22□□□□□ -1.57
LINC01109-201ENST00000603837 PAHP00439 452 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 AVPP01185 164 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 FERP16591 822 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 HSPA4P34932 840 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 UBE2HP62256 183 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 TRIM14Q14142 442 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 Q4G0T1 1027 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 ARMC4Q5T2S8 1044 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 DNAJB7Q7Z6W7 309 aaPredicted RBP5.22□□□□□ -1.57
LINC01109-201ENST00000603837 SLC7A5P1Q8MH63 180 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 SENP2Q9HC62 589 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 SMYD2Q9NRG4 433 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 PIH1D1Q9NWS0 290 aaKnown RBP5.22□□□□□ -1.57
LINC01109-201ENST00000603837 PPLO60437 1756 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 KIF1BO60333 1816 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 NWD1Q149M9 1564 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 ADGRF5Q8IZF2 1346 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 ERICH2A1L162 156 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 LRRC10BA6NIK2 292 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 M0R2C6 588 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 VAMP4O75379 141 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 XRCC5P13010 732 aaKnown RBP5.22□□□□□ -1.57
LINC01109-201ENST00000603837 CENPAP49450 140 aa5.22□□□□□ -1.57
LINC01109-201ENST00000603837 CCZ1BP86790 482 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms