RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 ERICH2A1L162 156 aa24.62■■□□□ 1.53
PPFIA3-209ENST00000602783 E7EWF7 191 aa24.62■■□□□ 1.53
PPFIA3-209ENST00000602783 CASTP20810 708 aaKnown RBP24.62■■□□□ 1.53
PPFIA3-209ENST00000602783 BFSP2Q13515 415 aa24.62■■□□□ 1.53
PPFIA3-209ENST00000602783 STOX1Q6ZVD7 989 aa24.62■■□□□ 1.53
PPFIA3-209ENST00000602783 HOMER1Q86YM7 354 aa24.62■■□□□ 1.53
PPFIA3-209ENST00000602783 PPM1EQ8WY54 764 aa24.62■■□□□ 1.53
PPFIA3-209ENST00000602783 PITPNM1O00562 1244 aa24.61■■□□□ 1.53
PPFIA3-209ENST00000602783 IQCF3P0C7M6 154 aa24.61■■□□□ 1.53
PPFIA3-209ENST00000602783 MYOGP15173 224 aa24.61■■□□□ 1.53
PPFIA3-209ENST00000602783 ATP2A2P16615 1042 aaKnown RBP24.61■■□□□ 1.53
PPFIA3-209ENST00000602783 RFC2P35250 354 aa24.61■■□□□ 1.53
PPFIA3-209ENST00000602783 GRM4Q14833 912 aa24.61■■□□□ 1.53
PPFIA3-209ENST00000602783 PTGISQ16647 500 aa24.61■■□□□ 1.53
PPFIA3-209ENST00000602783 NCOA7Q8NI08 942 aa24.61■■□□□ 1.53
PPFIA3-209ENST00000602783 KAT2BQ92831 832 aa24.61■■□□□ 1.53
PPFIA3-209ENST00000602783 MAP4K1Q92918 833 aa24.61■■□□□ 1.53
PPFIA3-209ENST00000602783 PIGSQ96S52 555 aa24.61■■□□□ 1.53
PPFIA3-209ENST00000602783 SENP2Q9HC62 589 aa24.61■■□□□ 1.53
PPFIA3-209ENST00000602783 MAP3K20Q9NYL2 800 aaKnown RBP24.61■■□□□ 1.53
PPFIA3-209ENST00000602783 RBM8AQ9Y5S9 174 aaKnown RBP24.61■■□□□ 1.53
PPFIA3-209ENST00000602783 MRVI1Q9Y6F6 885 aa24.61■■□□□ 1.53
PPFIA3-209ENST00000602783 VCANP13611 3396 aa24.61■■□□□ 1.53
PPFIA3-209ENST00000602783 SCN5AQ14524 2016 aa24.61■■□□□ 1.53
PPFIA3-209ENST00000602783 MYCLP12524 364 aaPredicted RBP24.6■■□□□ 1.53
PPFIA3-209ENST00000602783 ACTN1P12814 892 aa24.6■■□□□ 1.53
PPFIA3-209ENST00000602783 HOXA13P31271 388 aaPredicted RBP24.6■■□□□ 1.53
PPFIA3-209ENST00000602783 GHRHRQ02643 423 aa24.6■■□□□ 1.53
PPFIA3-209ENST00000602783 DGKDQ16760 1214 aa24.6■■□□□ 1.53
PPFIA3-209ENST00000602783 SLC35G1Q2M3R5 365 aa24.6■■□□□ 1.53
PPFIA3-209ENST00000602783 CENPQQ7L2Z9 268 aaPredicted RBP24.6■■□□□ 1.53
PPFIA3-209ENST00000602783 SKAP1Q86WV1 359 aa24.6■■□□□ 1.53
PPFIA3-209ENST00000602783 PDCD2LQ9BRP1 358 aa24.6■■□□□ 1.53
PPFIA3-209ENST00000602783 FTOQ9C0B1 505 aaKnown RBP eCLIP24.6■■□□□ 1.53
PPFIA3-209ENST00000602783 PCDHA11Q9Y5I1 949 aa24.6■■□□□ 1.53
PPFIA3-209ENST00000602783 CHD9Q3L8U1 2897 aa24.6■■□□□ 1.53
PPFIA3-209ENST00000602783 KIAA1217Q5T5P2 1943 aa24.6■■□□□ 1.53
PPFIA3-209ENST00000602783 BAZ2BQ9UIF8 2168 aaKnown RBP24.59■■□□□ 1.53
PPFIA3-209ENST00000602783 IGFBP4P22692 258 aa24.59■■□□□ 1.53
PPFIA3-209ENST00000602783 LAMC2Q13753 1193 aa24.59■■□□□ 1.53
PPFIA3-209ENST00000602783 ADGRE1Q14246 886 aa24.59■■□□□ 1.53
PPFIA3-209ENST00000602783 WTAPQ15007 396 aa24.59■■□□□ 1.53
PPFIA3-209ENST00000602783 GDF6Q6KF10 455 aaPredicted RBP24.59■■□□□ 1.53
PPFIA3-209ENST00000602783 DHX37Q8IY37 1157 aaKnown RBP24.59■■□□□ 1.53
PPFIA3-209ENST00000602783 RIOX1Q9H6W3 641 aa24.59■■□□□ 1.53
PPFIA3-209ENST00000602783 GBF1Q92538 1859 aa24.59■■□□□ 1.53
PPFIA3-209ENST00000602783 TRAF1Q13077 416 aa24.58■■□□□ 1.53
PPFIA3-209ENST00000602783 SART3Q15020 963 aaKnown RBP24.58■■□□□ 1.53
PPFIA3-209ENST00000602783 PPP2R2DQ66LE6 453 aa24.58■■□□□ 1.53
PPFIA3-209ENST00000602783 SESTD1Q86VW0 696 aa24.58■■□□□ 1.53
PPFIA3-209ENST00000602783 SAMD3Q8N6K7 520 aa24.58■■□□□ 1.53
PPFIA3-209ENST00000602783 EMID1Q96A84 441 aaPredicted RBP24.58■■□□□ 1.53
PPFIA3-209ENST00000602783 PRDM6Q9NQX0 595 aa24.58■■□□□ 1.53
PPFIA3-209ENST00000602783 RGS20O76081 388 aa24.57■■□□□ 1.52
PPFIA3-209ENST00000602783 ANTXR2P58335 489 aa24.57■■□□□ 1.52
PPFIA3-209ENST00000602783 TROAPQ12815 778 aa24.57■■□□□ 1.52
PPFIA3-209ENST00000602783 PGM5Q15124 567 aa24.57■■□□□ 1.52
PPFIA3-209ENST00000602783 MB21D2Q8IYB1 491 aaPredicted RBP24.57■■□□□ 1.52
PPFIA3-209ENST00000602783 CCDC155Q8N6L0 562 aa24.57■■□□□ 1.52
PPFIA3-209ENST00000602783 ESYT1Q9BSJ8 1104 aa24.57■■□□□ 1.52
PPFIA3-209ENST00000602783 ALG1Q9BT22 464 aa24.57■■□□□ 1.52
PPFIA3-209ENST00000602783 LSG1Q9H089 658 aaKnown RBP24.57■■□□□ 1.52
PPFIA3-209ENST00000602783 TRIP12Q14669 1992 aaPredicted RBP24.56■■□□□ 1.52
PPFIA3-209ENST00000602783 PNMA6FA0A0J9YX94 578 aa24.56■■□□□ 1.52
PPFIA3-209ENST00000602783 GCOM1H8Y6P7 765 aaPredicted RBP24.56■■□□□ 1.52
PPFIA3-209ENST00000602783 CYTH3O43739 400 aa24.56■■□□□ 1.52
PPFIA3-209ENST00000602783 POLR2MP0CAP2 368 aa24.56■■□□□ 1.52
PPFIA3-209ENST00000602783 PSEN2P49810 448 aa24.56■■□□□ 1.52
PPFIA3-209ENST00000602783 CCDC85BQ15834 202 aaPredicted RBP24.56■■□□□ 1.52
PPFIA3-209ENST00000602783 TMEM67Q5HYA8 995 aa24.56■■□□□ 1.52
PPFIA3-209ENST00000602783 VSIG10LQ86VR7 867 aa24.56■■□□□ 1.52
PPFIA3-209ENST00000602783 FCHSD1Q86WN1 690 aa24.56■■□□□ 1.52
PPFIA3-209ENST00000602783 C7orf31Q8N865 590 aa24.56■■□□□ 1.52
PPFIA3-209ENST00000602783 PPTC7Q8NI37 304 aa24.56■■□□□ 1.52
PPFIA3-209ENST00000602783 CAGE1Q8TC20 777 aa24.56■■□□□ 1.52
PPFIA3-209ENST00000602783 CTAGE1Q96RT6 745 aa24.56■■□□□ 1.52
PPFIA3-209ENST00000602783 HDAC6Q9UBN7 1215 aa24.56■■□□□ 1.52
PPFIA3-209ENST00000602783 SORBS3O60504 671 aa24.55■■□□□ 1.52
PPFIA3-209ENST00000602783 KCNV1Q6PIU1 500 aa24.55■■□□□ 1.52
PPFIA3-209ENST00000602783 CATIPQ7Z7H3 387 aa24.55■■□□□ 1.52
PPFIA3-209ENST00000602783 IL31RAQ8NI17 732 aa24.55■■□□□ 1.52
PPFIA3-209ENST00000602783 AFAP1L1Q8TED9 768 aa24.55■■□□□ 1.52
PPFIA3-209ENST00000602783 SYMPKQ92797 1274 aaKnown RBP24.55■■□□□ 1.52
PPFIA3-209ENST00000602783 ZFP91Q96JP5 570 aaPredicted RBP24.55■■□□□ 1.52
PPFIA3-209ENST00000602783 KATNAL1Q9BW62 490 aa24.55■■□□□ 1.52
PPFIA3-209ENST00000602783 GTF2IRD1Q9UHL9 959 aa24.55■■□□□ 1.52
PPFIA3-209ENST00000602783 MYH7BA7E2Y1 1941 aa24.55■■□□□ 1.52
PPFIA3-209ENST00000602783 TET1Q8NFU7 2136 aa24.55■■□□□ 1.52
PPFIA3-209ENST00000602783 ZNF286BP0CG31 522 aa24.54■■□□□ 1.52
PPFIA3-209ENST00000602783 MFSD10Q14728 455 aa24.54■■□□□ 1.52
PPFIA3-209ENST00000602783 KIAA0753Q2KHM9 967 aa24.54■■□□□ 1.52
PPFIA3-209ENST00000602783 BMP2KLQ5H9B9 411 aa24.54■■□□□ 1.52
PPFIA3-209ENST00000602783 MYSM1Q5VVJ2 828 aa24.54■■□□□ 1.52
PPFIA3-209ENST00000602783 PHOSPHO2Q8TCD6 241 aa24.54■■□□□ 1.52
PPFIA3-209ENST00000602783 IGDCC4Q8TDY8 1250 aa24.54■■□□□ 1.52
PPFIA3-209ENST00000602783 PIBF1Q8WXW3 757 aa24.54■■□□□ 1.52
PPFIA3-209ENST00000602783 DHX38Q92620 1227 aaKnown RBP24.54■■□□□ 1.52
PPFIA3-209ENST00000602783 SLC9A7Q96T83 725 aa24.54■■□□□ 1.52
PPFIA3-209ENST00000602783 CHD7Q9P2D1 2997 aa24.54■■□□□ 1.52
PPFIA3-209ENST00000602783 PPFIA4O75335 1185 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms