RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 KIAA0355O15063 1070 aa25.22■■□□□ 1.63
PPFIA3-208ENST00000602726 TLR3O15455 904 aaKnown RBP25.22■■□□□ 1.63
PPFIA3-208ENST00000602726 GH1P01241 217 aa25.22■■□□□ 1.63
PPFIA3-208ENST00000602726 RAG1P15918 1043 aa25.22■■□□□ 1.63
PPFIA3-208ENST00000602726 CCND2P30279 289 aa25.22■■□□□ 1.63
PPFIA3-208ENST00000602726 RCAN1P53805 252 aa25.22■■□□□ 1.63
PPFIA3-208ENST00000602726 APOBRQ0VD83 1088 aa25.22■■□□□ 1.63
PPFIA3-208ENST00000602726 TDHQ8IZJ6 230 aa25.22■■□□□ 1.63
PPFIA3-208ENST00000602726 IL31RAQ8NI17 732 aa25.22■■□□□ 1.63
PPFIA3-208ENST00000602726 BADQ92934 168 aa25.22■■□□□ 1.63
PPFIA3-208ENST00000602726 BRF1Q92994 677 aa25.22■■□□□ 1.63
PPFIA3-208ENST00000602726 SEZ6LQ9BYH1 1024 aa25.22■■□□□ 1.63
PPFIA3-208ENST00000602726 A6NJR5 290 aa25.21■■□□□ 1.63
PPFIA3-208ENST00000602726 KPNA6O60684 536 aa25.21■■□□□ 1.63
PPFIA3-208ENST00000602726 PSMC6P62333 389 aa25.21■■□□□ 1.63
PPFIA3-208ENST00000602726 PURAQ00577 322 aaKnown RBP25.21■■□□□ 1.63
PPFIA3-208ENST00000602726 USP17L6PQ6QN14 398 aa25.21■■□□□ 1.63
PPFIA3-208ENST00000602726 HEATR3Q7Z4Q2 680 aa25.21■■□□□ 1.63
PPFIA3-208ENST00000602726 SLC43A3Q8NBI5 491 aa25.21■■□□□ 1.63
PPFIA3-208ENST00000602726 PSTPIP2Q9H939 334 aa25.21■■□□□ 1.63
PPFIA3-208ENST00000602726 DDX41Q9UJV9 622 aaKnown RBP25.21■■□□□ 1.63
PPFIA3-208ENST00000602726 CNTNAP5Q8WYK1 1306 aa25.2■■□□□ 1.62
PPFIA3-208ENST00000602726 PIK3CDO00329 1044 aa25.2■■□□□ 1.62
PPFIA3-208ENST00000602726 METAP2P50579 478 aaKnown RBP eCLIP25.2■■□□□ 1.62
PPFIA3-208ENST00000602726 KCNV1Q6PIU1 500 aa25.2■■□□□ 1.62
PPFIA3-208ENST00000602726 FAM126BQ8IXS8 530 aa25.2■■□□□ 1.62
PPFIA3-208ENST00000602726 MTG1Q9BT17 334 aaPredicted RBP25.2■■□□□ 1.62
PPFIA3-208ENST00000602726 LTBP2Q14767 1821 aa25.19■■□□□ 1.62
PPFIA3-208ENST00000602726 GRIN2DO15399 1336 aa25.19■■□□□ 1.62
PPFIA3-208ENST00000602726 CCDC196A0A1B0GTZ2 297 aa25.19■■□□□ 1.62
PPFIA3-208ENST00000602726 MEIS2O14770 477 aa25.19■■□□□ 1.62
PPFIA3-208ENST00000602726 SLC34A2O95436 690 aa25.19■■□□□ 1.62
PPFIA3-208ENST00000602726 ARHGAP1Q07960 439 aa25.19■■□□□ 1.62
PPFIA3-208ENST00000602726 FBXL16Q8N461 479 aa25.19■■□□□ 1.62
PPFIA3-208ENST00000602726 AFG1LQ8WV93 481 aa25.19■■□□□ 1.62
PPFIA3-208ENST00000602726 GPKOWQ92917 476 aaPredicted RBP eCLIP25.19■■□□□ 1.62
PPFIA3-208ENST00000602726 V9GY48 417 aaPredicted RBP25.19■■□□□ 1.62
PPFIA3-208ENST00000602726 FRMPD4Q14CM0 1322 aa25.18■■□□□ 1.62
PPFIA3-208ENST00000602726 RGS20O76081 388 aa25.18■■□□□ 1.62
PPFIA3-208ENST00000602726 ITGB8P26012 769 aa25.18■■□□□ 1.62
PPFIA3-208ENST00000602726 CDC27P30260 824 aa25.18■■□□□ 1.62
PPFIA3-208ENST00000602726 FUT2Q10981 343 aa25.18■■□□□ 1.62
PPFIA3-208ENST00000602726 ZFP91Q96JP5 570 aaPredicted RBP25.18■■□□□ 1.62
PPFIA3-208ENST00000602726 FAM217BQ9NTX9 383 aaPredicted RBP25.18■■□□□ 1.62
PPFIA3-208ENST00000602726 TBX21Q9UL17 535 aa25.18■■□□□ 1.62
PPFIA3-208ENST00000602726 ADD1P35611 737 aaKnown RBP25.17■■□□□ 1.62
PPFIA3-208ENST00000602726 LAMC2Q13753 1193 aa25.17■■□□□ 1.62
PPFIA3-208ENST00000602726 RUFY3Q7L099 469 aa25.17■■□□□ 1.62
PPFIA3-208ENST00000602726 DHX37Q8IY37 1157 aaKnown RBP25.17■■□□□ 1.62
PPFIA3-208ENST00000602726 AGXT2Q9BYV1 514 aa25.17■■□□□ 1.62
PPFIA3-208ENST00000602726 ZSWIM6Q9HCJ5 1215 aa25.17■■□□□ 1.62
PPFIA3-208ENST00000602726 CYP46A1Q9Y6A2 500 aa25.17■■□□□ 1.62
PPFIA3-208ENST00000602726 STAM2O75886 525 aa25.16■■□□□ 1.62
PPFIA3-208ENST00000602726 TIMP1P01033 207 aa25.16■■□□□ 1.62
PPFIA3-208ENST00000602726 CD4P01730 458 aa25.16■■□□□ 1.62
PPFIA3-208ENST00000602726 MMP3P08254 477 aa25.16■■□□□ 1.62
PPFIA3-208ENST00000602726 TGFB3P10600 412 aa25.16■■□□□ 1.62
PPFIA3-208ENST00000602726 GNPTABQ3T906 1256 aa25.16■■□□□ 1.62
PPFIA3-208ENST00000602726 WWC2Q6AWC2 1192 aa25.16■■□□□ 1.62
PPFIA3-208ENST00000602726 EMID1Q96A84 441 aaPredicted RBP25.16■■□□□ 1.62
PPFIA3-208ENST00000602726 NAPAP54920 295 aa25.15■■□□□ 1.62
PPFIA3-208ENST00000602726 MRPS9P82933 396 aaKnown RBP25.15■■□□□ 1.62
PPFIA3-208ENST00000602726 XRRA1Q6P2D8 792 aa25.15■■□□□ 1.62
PPFIA3-208ENST00000602726 TM6SF1Q9BZW5 370 aa25.15■■□□□ 1.62
PPFIA3-208ENST00000602726 TRPV6Q9H1D0 765 aa25.15■■□□□ 1.62
PPFIA3-208ENST00000602726 SPDYE3A6NKU9 549 aa25.14■■□□□ 1.62
PPFIA3-208ENST00000602726 FPGSQ05932 587 aa25.14■■□□□ 1.62
PPFIA3-208ENST00000602726 DGKDQ16760 1214 aa25.14■■□□□ 1.62
PPFIA3-208ENST00000602726 UBE2SQ16763 222 aa25.14■■□□□ 1.62
PPFIA3-208ENST00000602726 NBPF20Q3BBV1 942 aa25.14■■□□□ 1.62
PPFIA3-208ENST00000602726 LRIT3Q3SXY7 679 aa25.14■■□□□ 1.62
PPFIA3-208ENST00000602726 PCNX4Q63HM2 1172 aa25.14■■□□□ 1.62
PPFIA3-208ENST00000602726 PPP1R18Q6NYC8 613 aa25.14■■□□□ 1.62
PPFIA3-208ENST00000602726 ALDH8A1Q9H2A2 487 aaPredicted RBP25.14■■□□□ 1.62
PPFIA3-208ENST00000602726 RTEL1Q9NZ71 1219 aa25.14■■□□□ 1.62
PPFIA3-208ENST00000602726 LAMA3Q16787 3333 aa25.14■■□□□ 1.61
PPFIA3-208ENST00000602726 hCG_1984214I3L0E3 225 aa25.13■■□□□ 1.61
PPFIA3-208ENST00000602726 B4GALT4O60513 344 aa25.13■■□□□ 1.61
PPFIA3-208ENST00000602726 GGPS1O95749 300 aa25.13■■□□□ 1.61
PPFIA3-208ENST00000602726 CHMP4BP1P59074 171 aa25.13■■□□□ 1.61
PPFIA3-208ENST00000602726 FAM47CQ5HY64 1035 aa25.13■■□□□ 1.61
PPFIA3-208ENST00000602726 CELF3Q5SZQ8 465 aaKnown RBP25.13■■□□□ 1.61
PPFIA3-208ENST00000602726 ZNF713Q8N859 430 aaPredicted RBP25.13■■□□□ 1.61
PPFIA3-208ENST00000602726 PPTC7Q8NI37 304 aa25.13■■□□□ 1.61
PPFIA3-208ENST00000602726 INPP4AQ96PE3 977 aaPredicted RBP25.13■■□□□ 1.61
PPFIA3-208ENST00000602726 MYH7BA7E2Y1 1941 aa25.12■■□□□ 1.61
PPFIA3-208ENST00000602726 SOX1O00570 391 aaPredicted RBP25.12■■□□□ 1.61
PPFIA3-208ENST00000602726 SORBS3O60504 671 aa25.12■■□□□ 1.61
PPFIA3-208ENST00000602726 UBA1P22314 1058 aaKnown RBP25.12■■□□□ 1.61
PPFIA3-208ENST00000602726 SP2Q02086 613 aa25.12■■□□□ 1.61
PPFIA3-208ENST00000602726 MYSM1Q5VVJ2 828 aa25.12■■□□□ 1.61
PPFIA3-208ENST00000602726 MFSD5Q6N075 450 aa25.12■■□□□ 1.61
PPFIA3-208ENST00000602726 SPATA33Q96N06 139 aa25.12■■□□□ 1.61
PPFIA3-208ENST00000602726 UPF3BQ9BZI7 483 aaKnown RBP25.12■■□□□ 1.61
PPFIA3-208ENST00000602726 PPP1R12CQ9BZL4 782 aa25.12■■□□□ 1.61
PPFIA3-208ENST00000602726 MLXIPQ9HAP2 919 aa25.12■■□□□ 1.61
PPFIA3-208ENST00000602726 BARHL2Q9NY43 387 aa25.12■■□□□ 1.61
PPFIA3-208ENST00000602726 NID2Q14112 1375 aa25.12■■□□□ 1.61
PPFIA3-208ENST00000602726 SCN10AQ9Y5Y9 1956 aa25.12■■□□□ 1.61
PPFIA3-208ENST00000602726 STXBP3O00186 592 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms