RNA–Protein interactions for RNA: ENST00000602660.1

SFXN2-208, Transcript of sideroflexin 2, humanhuman

TSL 2

Gene SFXN2, Length 667 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-208ENST00000602660 DCDC2CA8MYV0 355 aa18.44■□□□□ 0.54
SFXN2-208ENST00000602660 MEIS2O14770 477 aa18.44■□□□□ 0.54
SFXN2-208ENST00000602660 EIF3JO75822 258 aaKnown RBP18.44■□□□□ 0.54
SFXN2-208ENST00000602660 CD4P01730 458 aa18.44■□□□□ 0.54
SFXN2-208ENST00000602660 HMGB1P09429 215 aaKnown RBP18.44■□□□□ 0.54
SFXN2-208ENST00000602660 PSMC6P62333 389 aa18.44■□□□□ 0.54
SFXN2-208ENST00000602660 ITGA7Q13683 1181 aa18.44■□□□□ 0.54
SFXN2-208ENST00000602660 LY6KQ17RY6 165 aa18.44■□□□□ 0.54
SFXN2-208ENST00000602660 VSIG10LQ86VR7 867 aa18.44■□□□□ 0.54
SFXN2-208ENST00000602660 FCHSD1Q86WN1 690 aa18.44■□□□□ 0.54
SFXN2-208ENST00000602660 CCDC82Q8N4S0 544 aa18.44■□□□□ 0.54
SFXN2-208ENST00000602660 VTI1AQ96AJ9 217 aa18.44■□□□□ 0.54
SFXN2-208ENST00000602660 LBHD1Q9BQE6 289 aaPredicted RBP18.44■□□□□ 0.54
SFXN2-208ENST00000602660 AGXT2Q9BYV1 514 aa18.44■□□□□ 0.54
SFXN2-208ENST00000602660 DDX41Q9UJV9 622 aaKnown RBP18.44■□□□□ 0.54
SFXN2-208ENST00000602660 PIK3CDO00329 1044 aa18.43■□□□□ 0.54
SFXN2-208ENST00000602660 ZBTB43O43298 467 aa18.43■□□□□ 0.54
SFXN2-208ENST00000602660 EPB41L2O43491 1005 aaKnown RBP18.43■□□□□ 0.54
SFXN2-208ENST00000602660 ZEB2O60315 1214 aa18.43■□□□□ 0.54
SFXN2-208ENST00000602660 CDC27P30260 824 aa18.43■□□□□ 0.54
SFXN2-208ENST00000602660 CPT1AP50416 773 aa18.43■□□□□ 0.54
SFXN2-208ENST00000602660 USP17L6PQ6QN14 398 aa18.43■□□□□ 0.54
SFXN2-208ENST00000602660 FBXL16Q8N461 479 aa18.43■□□□□ 0.54
SFXN2-208ENST00000602660 ZFP91Q96JP5 570 aaPredicted RBP18.43■□□□□ 0.54
SFXN2-208ENST00000602660 USP26Q9BXU7 913 aa18.43■□□□□ 0.54
SFXN2-208ENST00000602660 TMEM39AQ9NV64 488 aa18.43■□□□□ 0.54
SFXN2-208ENST00000602660 SEC63Q9UGP8 760 aaKnown RBP18.43■□□□□ 0.54
SFXN2-208ENST00000602660 NID2Q14112 1375 aa18.42■□□□□ 0.54
SFXN2-208ENST00000602660 KLF18A0A0U1RQI7 1052 aa18.42■□□□□ 0.54
SFXN2-208ENST00000602660 MYCLP12524 364 aaPredicted RBP18.42■□□□□ 0.54
SFXN2-208ENST00000602660 RCAN1P53805 252 aa18.42■□□□□ 0.54
SFXN2-208ENST00000602660 MRPS9P82933 396 aaKnown RBP18.42■□□□□ 0.54
SFXN2-208ENST00000602660 RTN1Q16799 776 aa18.42■□□□□ 0.54
SFXN2-208ENST00000602660 LRIT3Q3SXY7 679 aa18.42■□□□□ 0.54
SFXN2-208ENST00000602660 Q6ZUG5 572 aa18.42■□□□□ 0.54
SFXN2-208ENST00000602660 GPKOWQ92917 476 aaPredicted RBP eCLIP18.42■□□□□ 0.54
SFXN2-208ENST00000602660 LRCH3Q96II8 777 aa18.42■□□□□ 0.54
SFXN2-208ENST00000602660 POLR3EQ9NVU0 708 aa18.42■□□□□ 0.54
SFXN2-208ENST00000602660 RBM28Q9NW13 759 aaKnown RBP18.42■□□□□ 0.54
SFXN2-208ENST00000602660 EVPLQ92817 2033 aa18.41■□□□□ 0.54
SFXN2-208ENST00000602660 GH1P01241 217 aa18.41■□□□□ 0.54
SFXN2-208ENST00000602660 MYL3P08590 195 aa18.41■□□□□ 0.54
SFXN2-208ENST00000602660 RPS6KB1P23443 525 aa18.41■□□□□ 0.54
SFXN2-208ENST00000602660 EPHB4P54760 987 aa18.41■□□□□ 0.54
SFXN2-208ENST00000602660 APOBRQ0VD83 1088 aa18.41■□□□□ 0.54
SFXN2-208ENST00000602660 C9orf50Q5SZB4 431 aa18.41■□□□□ 0.54
SFXN2-208ENST00000602660 TYW1BQ6NUM6 668 aa18.41■□□□□ 0.54
SFXN2-208ENST00000602660 BLOC1S2Q6QNY1 142 aa18.41■□□□□ 0.54
SFXN2-208ENST00000602660 SYNE3Q6ZMZ3 975 aa18.41■□□□□ 0.54
SFXN2-208ENST00000602660 AFG1LQ8WV93 481 aa18.41■□□□□ 0.54
SFXN2-208ENST00000602660 GOLGA8AA7E2F4 631 aa18.4■□□□□ 0.54
SFXN2-208ENST00000602660 GOLGA8BA8MQT2 603 aa18.4■□□□□ 0.54
SFXN2-208ENST00000602660 TIMP1P01033 207 aa18.4■□□□□ 0.54
SFXN2-208ENST00000602660 MMP3P08254 477 aa18.4■□□□□ 0.54
SFXN2-208ENST00000602660 RAG1P15918 1043 aa18.4■□□□□ 0.54
SFXN2-208ENST00000602660 CCND2P30279 289 aa18.4■□□□□ 0.54
SFXN2-208ENST00000602660 SP2Q02086 613 aa18.4■□□□□ 0.54
SFXN2-208ENST00000602660 WWC2Q6AWC2 1192 aa18.4■□□□□ 0.54
SFXN2-208ENST00000602660 BRF1Q92994 677 aa18.4■□□□□ 0.54
SFXN2-208ENST00000602660 EMID1Q96A84 441 aaPredicted RBP18.4■□□□□ 0.54
SFXN2-208ENST00000602660 MTG1Q9BT17 334 aaPredicted RBP18.4■□□□□ 0.54
SFXN2-208ENST00000602660 MRVI1Q9Y6F6 885 aa18.4■□□□□ 0.54
SFXN2-208ENST00000602660 B4GALT4O60513 344 aa18.39■□□□□ 0.53
SFXN2-208ENST00000602660 HOXD8P13378 290 aaPredicted RBP18.39■□□□□ 0.53
SFXN2-208ENST00000602660 CASTP20810 708 aaKnown RBP18.39■□□□□ 0.53
SFXN2-208ENST00000602660 SEMA3FQ13275 785 aa18.39■□□□□ 0.53
SFXN2-208ENST00000602660 SHHQ15465 462 aa18.39■□□□□ 0.53
SFXN2-208ENST00000602660 PPP1R13LQ8WUF5 828 aa18.39■□□□□ 0.53
SFXN2-208ENST00000602660 KAT2BQ92831 832 aa18.39■□□□□ 0.53
SFXN2-208ENST00000602660 SEZ6LQ9BYH1 1024 aa18.39■□□□□ 0.53
SFXN2-208ENST00000602660 TRPV6Q9H1D0 765 aa18.39■□□□□ 0.53
SFXN2-208ENST00000602660 ALDH8A1Q9H2A2 487 aaPredicted RBP18.39■□□□□ 0.53
SFXN2-208ENST00000602660 SIP14410 1827 aa18.39■□□□□ 0.53
SFXN2-208ENST00000602660 CDH23Q9H251 3354 aa18.39■□□□□ 0.53
SFXN2-208ENST00000602660 KPNA6O60684 536 aa18.38■□□□□ 0.53
SFXN2-208ENST00000602660 UBA1P22314 1058 aaKnown RBP18.38■□□□□ 0.53
SFXN2-208ENST00000602660 ADD1P35611 737 aaKnown RBP18.38■□□□□ 0.53
SFXN2-208ENST00000602660 EVCP57679 992 aa18.38■□□□□ 0.53
SFXN2-208ENST00000602660 UBE2SQ16763 222 aa18.38■□□□□ 0.53
SFXN2-208ENST00000602660 NBPF20Q3BBV1 942 aa18.38■□□□□ 0.53
SFXN2-208ENST00000602660 MYSM1Q5VVJ2 828 aa18.38■□□□□ 0.53
SFXN2-208ENST00000602660 HEATR3Q7Z4Q2 680 aa18.38■□□□□ 0.53
SFXN2-208ENST00000602660 SMARCC2Q8TAQ2 1214 aa18.38■□□□□ 0.53
SFXN2-208ENST00000602660 INPP4AQ96PE3 977 aaPredicted RBP18.38■□□□□ 0.53
SFXN2-208ENST00000602660 BCAS3Q9H6U6 928 aa18.38■□□□□ 0.53
SFXN2-208ENST00000602660 PSTPIP2Q9H939 334 aa18.38■□□□□ 0.53
SFXN2-208ENST00000602660 ZSWIM6Q9HCJ5 1215 aa18.38■□□□□ 0.53
SFXN2-208ENST00000602660 UMODL1Q5DID0 1318 aa18.38■□□□□ 0.53
SFXN2-208ENST00000602660 MICAL3Q7RTP6 2002 aa18.38■□□□□ 0.53
SFXN2-208ENST00000602660 COL6A3P12111 3177 aa18.37■□□□□ 0.53
SFXN2-208ENST00000602660 TLR3O15455 904 aaKnown RBP18.37■□□□□ 0.53
SFXN2-208ENST00000602660 PSMA5P28066 241 aa18.37■□□□□ 0.53
SFXN2-208ENST00000602660 ICAM3P32942 547 aa18.37■□□□□ 0.53
SFXN2-208ENST00000602660 TOB2Q14106 344 aaPredicted RBP18.37■□□□□ 0.53
SFXN2-208ENST00000602660 BRDTQ58F21 947 aaPredicted RBP18.37■□□□□ 0.53
SFXN2-208ENST00000602660 RUFY3Q7L099 469 aa18.37■□□□□ 0.53
SFXN2-208ENST00000602660 PPP1R12CQ9BZL4 782 aa18.37■□□□□ 0.53
SFXN2-208ENST00000602660 TRMT13Q9NUP7 481 aaKnown RBP18.37■□□□□ 0.53
SFXN2-208ENST00000602660 V9GY48 417 aaPredicted RBP18.37■□□□□ 0.53
SFXN2-208ENST00000602660 STXBP3O00186 592 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms