RNA–Protein interactions for RNA: ENST00000602308.1

TRIM11-205, Transcript of tripartite motif containing 11, humanhuman

TSL 3

Gene TRIM11, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-205ENST00000602308 PHF7Q9BWX1 381 aaPredicted RBP17.16■□□□□ 0.34
TRIM11-205ENST00000602308 USP15Q9Y4E8 981 aaPredicted RBP17.16■□□□□ 0.34
TRIM11-205ENST00000602308 CHD6Q8TD26 2715 aa17.16■□□□□ 0.34
TRIM11-205ENST00000602308 TMEM232C9JQI7 657 aa17.15■□□□□ 0.34
TRIM11-205ENST00000602308 NKRFO15226 690 aaKnown RBP eCLIP17.15■□□□□ 0.34
TRIM11-205ENST00000602308 SURF6O75683 361 aaKnown RBP17.15■□□□□ 0.34
TRIM11-205ENST00000602308 MBD4O95243 580 aa17.15■□□□□ 0.34
TRIM11-205ENST00000602308 RASA1P20936 1047 aa17.15■□□□□ 0.34
TRIM11-205ENST00000602308 COASYQ13057 564 aa17.15■□□□□ 0.34
TRIM11-205ENST00000602308 CAMK1Q14012 370 aa17.15■□□□□ 0.34
TRIM11-205ENST00000602308 PPP2R5BQ15173 497 aa17.15■□□□□ 0.34
TRIM11-205ENST00000602308 CTR9Q6PD62 1173 aa17.15■□□□□ 0.34
TRIM11-205ENST00000602308 GTF2IRD1Q9UHL9 959 aa17.15■□□□□ 0.34
TRIM11-205ENST00000602308 RB1P06400 928 aa17.14■□□□□ 0.33
TRIM11-205ENST00000602308 BMP3P12645 472 aa17.14■□□□□ 0.33
TRIM11-205ENST00000602308 SNAP25P60880 206 aa17.14■□□□□ 0.33
TRIM11-205ENST00000602308 PUM1Q14671 1186 aaKnown RBP eCLIP17.14■□□□□ 0.33
TRIM11-205ENST00000602308 RPAP2Q8IXW5 612 aaPredicted RBP17.14■□□□□ 0.33
TRIM11-205ENST00000602308 AMOTL1Q8IY63 956 aa17.14■□□□□ 0.33
TRIM11-205ENST00000602308 MKL1Q969V6 931 aa17.14■□□□□ 0.33
TRIM11-205ENST00000602308 C11orf84Q9BUA3 381 aaPredicted RBP17.14■□□□□ 0.33
TRIM11-205ENST00000602308 HDAC6Q9UBN7 1215 aa17.14■□□□□ 0.33
TRIM11-205ENST00000602308 IGKV6D-41A0A0C4DH26 115 aa17.13■□□□□ 0.33
TRIM11-205ENST00000602308 BMPR1AP36894 532 aa17.13■□□□□ 0.33
TRIM11-205ENST00000602308 PTK7Q13308 1070 aa17.13■□□□□ 0.33
TRIM11-205ENST00000602308 TTF1Q15361 905 aaPredicted RBP17.13■□□□□ 0.33
TRIM11-205ENST00000602308 PLEKHG4Q58EX7 1191 aa17.13■□□□□ 0.33
TRIM11-205ENST00000602308 ADD3Q9UEY8 706 aaKnown RBP17.13■□□□□ 0.33
TRIM11-205ENST00000602308 RALGAPA2Q2PPJ7 1873 aa17.12■□□□□ 0.33
TRIM11-205ENST00000602308 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.12■□□□□ 0.33
TRIM11-205ENST00000602308 ARIH2O95376 493 aa17.12■□□□□ 0.33
TRIM11-205ENST00000602308 STAT2P52630 851 aa17.12■□□□□ 0.33
TRIM11-205ENST00000602308 BAATQ14032 418 aaPredicted RBP17.12■□□□□ 0.33
TRIM11-205ENST00000602308 SLFN13Q68D06 897 aa17.12■□□□□ 0.33
TRIM11-205ENST00000602308 ADGRD2Q7Z7M1 963 aa17.12■□□□□ 0.33
TRIM11-205ENST00000602308 KIAA2013Q8IYS2 634 aa17.12■□□□□ 0.33
TRIM11-205ENST00000602308 STK11IPQ8N1F8 1099 aa17.12■□□□□ 0.33
TRIM11-205ENST00000602308 FIBCD1Q8N539 461 aa17.12■□□□□ 0.33
TRIM11-205ENST00000602308 GMCL1P1Q8NEA9 526 aa17.12■□□□□ 0.33
TRIM11-205ENST00000602308 SSH3Q8TE77 659 aa17.12■□□□□ 0.33
TRIM11-205ENST00000602308 BARX2Q9UMQ3 279 aaPredicted RBP17.12■□□□□ 0.33
TRIM11-205ENST00000602308 PCDHGC5Q9Y5F6 944 aa17.12■□□□□ 0.33
TRIM11-205ENST00000602308 ZBED9Q6R2W3 1325 aa17.12■□□□□ 0.33
TRIM11-205ENST00000602308 CEP250Q9BV73 2442 aa17.11■□□□□ 0.33
TRIM11-205ENST00000602308 ATRXP46100 2492 aa17.11■□□□□ 0.33
TRIM11-205ENST00000602308 GLP2RO95838 553 aa17.11■□□□□ 0.33
TRIM11-205ENST00000602308 MMP1P03956 469 aa17.11■□□□□ 0.33
TRIM11-205ENST00000602308 ZNF200P98182 395 aaPredicted RBP17.11■□□□□ 0.33
TRIM11-205ENST00000602308 EFHBQ8N7U6 833 aa17.11■□□□□ 0.33
TRIM11-205ENST00000602308 SCFD2Q8WU76 684 aa17.11■□□□□ 0.33
TRIM11-205ENST00000602308 AFG1LQ8WV93 481 aa17.11■□□□□ 0.33
TRIM11-205ENST00000602308 OSBPL7Q9BZF2 842 aa17.11■□□□□ 0.33
TRIM11-205ENST00000602308 EMSYQ7Z589 1322 aa17.11■□□□□ 0.33
TRIM11-205ENST00000602308 LOC102724159A0A0B4J2E5 919 aa17.1■□□□□ 0.33
TRIM11-205ENST00000602308 BCAR3O75815 825 aa17.1■□□□□ 0.33
TRIM11-205ENST00000602308 MMP3P08254 477 aa17.1■□□□□ 0.33
TRIM11-205ENST00000602308 TXNP10599 105 aaKnown RBP17.1■□□□□ 0.33
TRIM11-205ENST00000602308 PDE4BQ07343 736 aa17.1■□□□□ 0.33
TRIM11-205ENST00000602308 PWP2Q15269 919 aaKnown RBP17.1■□□□□ 0.33
TRIM11-205ENST00000602308 STAG1Q8WVM7 1258 aa17.1■□□□□ 0.33
TRIM11-205ENST00000602308 CEP95Q96GE4 821 aa17.1■□□□□ 0.33
TRIM11-205ENST00000602308 IFIH1Q9BYX4 1025 aaKnown RBP17.1■□□□□ 0.33
TRIM11-205ENST00000602308 DLL3Q9NYJ7 618 aa17.1■□□□□ 0.33
TRIM11-205ENST00000602308 NOP58Q9Y2X3 529 aaKnown RBP17.1■□□□□ 0.33
TRIM11-205ENST00000602308 FRYLO94915 3013 aa17.1■□□□□ 0.33
TRIM11-205ENST00000602308 GOLIM4O00461 696 aa17.09■□□□□ 0.33
TRIM11-205ENST00000602308 CHGBP05060 677 aa17.09■□□□□ 0.33
TRIM11-205ENST00000602308 ATF7P17544 494 aaPredicted RBP17.09■□□□□ 0.33
TRIM11-205ENST00000602308 SLFN5Q08AF3 891 aa17.09■□□□□ 0.33
TRIM11-205ENST00000602308 HIC1Q14526 733 aa17.09■□□□□ 0.33
TRIM11-205ENST00000602308 FAM160B2Q86V87 743 aa17.09■□□□□ 0.33
TRIM11-205ENST00000602308 C7orf31Q8N865 590 aa17.09■□□□□ 0.33
TRIM11-205ENST00000602308 CHURC1Q8WUH1 139 aa17.09■□□□□ 0.33
TRIM11-205ENST00000602308 SUSD6Q92537 303 aa17.09■□□□□ 0.33
TRIM11-205ENST00000602308 CHMP4CQ96CF2 233 aa17.09■□□□□ 0.33
TRIM11-205ENST00000602308 IL17RAQ96F46 866 aa17.09■□□□□ 0.33
TRIM11-205ENST00000602308 ALG1Q9BT22 464 aa17.09■□□□□ 0.33
TRIM11-205ENST00000602308 MKNK2Q9HBH9 465 aa17.09■□□□□ 0.33
TRIM11-205ENST00000602308 MTMR4Q9NYA4 1195 aa17.09■□□□□ 0.33
TRIM11-205ENST00000602308 ISY1Q9ULR0 285 aaKnown RBP17.09■□□□□ 0.33
TRIM11-205ENST00000602308 SPTBN2O15020 2390 aa17.09■□□□□ 0.33
TRIM11-205ENST00000602308 MAP1BP46821 2468 aaKnown RBP17.09■□□□□ 0.33
TRIM11-205ENST00000602308 PKD1L2Q7Z442 2459 aa17.08■□□□□ 0.33
TRIM11-205ENST00000602308 MYH4Q9Y623 1939 aa17.08■□□□□ 0.33
TRIM11-205ENST00000602308 RSPH10B2B2RC85 870 aa17.08■□□□□ 0.32
TRIM11-205ENST00000602308 RSPH10BP0C881 870 aa17.08■□□□□ 0.32
TRIM11-205ENST00000602308 DNAJB1P25685 340 aa17.08■□□□□ 0.32
TRIM11-205ENST00000602308 ATP8B2P98198 1209 aa17.08■□□□□ 0.32
TRIM11-205ENST00000602308 IKQ13123 557 aaPredicted RBP17.08■□□□□ 0.32
TRIM11-205ENST00000602308 ST3GAL2Q16842 350 aa17.08■□□□□ 0.32
TRIM11-205ENST00000602308 ASTLQ6HA08 431 aaPredicted RBP17.08■□□□□ 0.32
TRIM11-205ENST00000602308 ZBTB33Q86T24 672 aa17.08■□□□□ 0.32
TRIM11-205ENST00000602308 CLP1Q92989 425 aaKnown RBP17.08■□□□□ 0.32
TRIM11-205ENST00000602308 CCPG1Q9ULG6 757 aa17.08■□□□□ 0.32
TRIM11-205ENST00000602308 SYNPO2Q9UMS6 1093 aa17.08■□□□□ 0.32
TRIM11-205ENST00000602308 SLC4A4Q9Y6R1 1079 aa17.08■□□□□ 0.32
TRIM11-205ENST00000602308 NFIBO00712 420 aa17.07■□□□□ 0.32
TRIM11-205ENST00000602308 EDNRBP24530 442 aa17.07■□□□□ 0.32
TRIM11-205ENST00000602308 ADD2P35612 726 aa17.07■□□□□ 0.32
TRIM11-205ENST00000602308 NRIP1P48552 1158 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms