RNA–Protein interactions for RNA: ENST00000601609.1

PPFIA4-213, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-213ENST00000601609 ARVCFO00192 962 aa18.26■□□□□ 0.51
PPFIA4-213ENST00000601609 SORBS3O60504 671 aa18.26■□□□□ 0.51
PPFIA4-213ENST00000601609 EIF5BO60841 1220 aaKnown RBP18.26■□□□□ 0.51
PPFIA4-213ENST00000601609 CDC27P30260 824 aa18.26■□□□□ 0.51
PPFIA4-213ENST00000601609 PSMC6P62333 389 aa18.26■□□□□ 0.51
PPFIA4-213ENST00000601609 NKX3-2P78367 333 aa18.26■□□□□ 0.51
PPFIA4-213ENST00000601609 V9GY48 417 aaPredicted RBP18.26■□□□□ 0.51
PPFIA4-213ENST00000601609 KIAA1217Q5T5P2 1943 aa18.25■□□□□ 0.51
PPFIA4-213ENST00000601609 SPDYE3A6NKU9 549 aa18.25■□□□□ 0.51
PPFIA4-213ENST00000601609 ADD1P35611 737 aaKnown RBP18.25■□□□□ 0.51
PPFIA4-213ENST00000601609 AKAP17AQ02040 695 aaKnown RBP18.25■□□□□ 0.51
PPFIA4-213ENST00000601609 ITGA7Q13683 1181 aa18.25■□□□□ 0.51
PPFIA4-213ENST00000601609 UBE2SQ16763 222 aa18.25■□□□□ 0.51
PPFIA4-213ENST00000601609 WWC2Q6AWC2 1192 aa18.25■□□□□ 0.51
PPFIA4-213ENST00000601609 SH3RF1Q7Z6J0 888 aa18.25■□□□□ 0.51
PPFIA4-213ENST00000601609 GDF15Q99988 308 aa18.25■□□□□ 0.51
PPFIA4-213ENST00000601609 ZSWIM6Q9HCJ5 1215 aa18.25■□□□□ 0.51
PPFIA4-213ENST00000601609 RAG1P15918 1043 aa18.24■□□□□ 0.51
PPFIA4-213ENST00000601609 CCT2P78371 535 aaKnown RBP18.24■□□□□ 0.51
PPFIA4-213ENST00000601609 GNPTABQ3T906 1256 aa18.24■□□□□ 0.51
PPFIA4-213ENST00000601609 FAM47CQ5HY64 1035 aa18.24■□□□□ 0.51
PPFIA4-213ENST00000601609 CCDC62Q6P9F0 684 aa18.24■□□□□ 0.51
PPFIA4-213ENST00000601609 ANKRD33Q7Z3H0 272 aa18.24■□□□□ 0.51
PPFIA4-213ENST00000601609 VSIG10LQ86VR7 867 aa18.24■□□□□ 0.51
PPFIA4-213ENST00000601609 DHX37Q8IY37 1157 aaKnown RBP18.24■□□□□ 0.51
PPFIA4-213ENST00000601609 AFG1LQ8WV93 481 aa18.24■□□□□ 0.51
PPFIA4-213ENST00000601609 MTG1Q9BT17 334 aaPredicted RBP18.24■□□□□ 0.51
PPFIA4-213ENST00000601609 EHMT1Q9H9B1 1298 aa18.24■□□□□ 0.51
PPFIA4-213ENST00000601609 PDRG1Q9NUG6 133 aa18.24■□□□□ 0.51
PPFIA4-213ENST00000601609 TRIM43BA6NCK2 446 aa18.23■□□□□ 0.51
PPFIA4-213ENST00000601609 hCG_1984214I3L0E3 225 aa18.23■□□□□ 0.51
PPFIA4-213ENST00000601609 PIK3CDO00329 1044 aa18.23■□□□□ 0.51
PPFIA4-213ENST00000601609 MEIS2O14770 477 aa18.23■□□□□ 0.51
PPFIA4-213ENST00000601609 ADCY7P51828 1080 aa18.23■□□□□ 0.51
PPFIA4-213ENST00000601609 PPP1R18Q6NYC8 613 aa18.23■□□□□ 0.51
PPFIA4-213ENST00000601609 KCNV1Q6PIU1 500 aa18.23■□□□□ 0.51
PPFIA4-213ENST00000601609 ZNF713Q8N859 430 aaPredicted RBP18.23■□□□□ 0.51
PPFIA4-213ENST00000601609 BADQ92934 168 aa18.23■□□□□ 0.51
PPFIA4-213ENST00000601609 TRIM43Q96BQ3 446 aaPredicted RBP18.23■□□□□ 0.51
PPFIA4-213ENST00000601609 TOX2Q96NM4 488 aa18.23■□□□□ 0.51
PPFIA4-213ENST00000601609 TM6SF1Q9BZW5 370 aa18.23■□□□□ 0.51
PPFIA4-213ENST00000601609 FAM217BQ9NTX9 383 aaPredicted RBP18.23■□□□□ 0.51
PPFIA4-213ENST00000601609 RTEL1Q9NZ71 1219 aa18.23■□□□□ 0.51
PPFIA4-213ENST00000601609 DDX41Q9UJV9 622 aaKnown RBP18.23■□□□□ 0.51
PPFIA4-213ENST00000601609 LTBP2Q14767 1821 aa18.22■□□□□ 0.51
PPFIA4-213ENST00000601609 KPNA6O60684 536 aa18.22■□□□□ 0.51
PPFIA4-213ENST00000601609 MMP3P08254 477 aa18.22■□□□□ 0.51
PPFIA4-213ENST00000601609 BMP8BP34820 402 aa18.22■□□□□ 0.51
PPFIA4-213ENST00000601609 PURAQ00577 322 aaKnown RBP18.22■□□□□ 0.51
PPFIA4-213ENST00000601609 ARHGAP1Q07960 439 aa18.22■□□□□ 0.51
PPFIA4-213ENST00000601609 FAAP100Q0VG06 881 aa18.22■□□□□ 0.51
PPFIA4-213ENST00000601609 LARP6Q9BRS8 491 aaKnown RBP18.22■□□□□ 0.51
PPFIA4-213ENST00000601609 AGXT2Q9BYV1 514 aa18.22■□□□□ 0.51
PPFIA4-213ENST00000601609 PRO3102Q9H379 93 aa18.22■□□□□ 0.51
PPFIA4-213ENST00000601609 FRMPD4Q14CM0 1322 aa18.22■□□□□ 0.51
PPFIA4-213ENST00000601609 A0A1W2PPC1 479 aa18.21■□□□□ 0.51
PPFIA4-213ENST00000601609 A6NJR5 290 aa18.21■□□□□ 0.51
PPFIA4-213ENST00000601609 STXBP3O00186 592 aa18.21■□□□□ 0.51
PPFIA4-213ENST00000601609 CPLX1O14810 134 aa18.21■□□□□ 0.51
PPFIA4-213ENST00000601609 PPFIA3O75145 1194 aa18.21■□□□□ 0.51
PPFIA4-213ENST00000601609 STAM2O75886 525 aa18.21■□□□□ 0.51
PPFIA4-213ENST00000601609 GGPS1O95749 300 aa18.21■□□□□ 0.51
PPFIA4-213ENST00000601609 CDK7P50613 346 aa18.21■□□□□ 0.51
PPFIA4-213ENST00000601609 FUT2Q10981 343 aa18.21■□□□□ 0.51
PPFIA4-213ENST00000601609 STK3Q13188 491 aa18.21■□□□□ 0.51
PPFIA4-213ENST00000601609 LAMC2Q13753 1193 aa18.21■□□□□ 0.51
PPFIA4-213ENST00000601609 TOB2Q14106 344 aaPredicted RBP18.21■□□□□ 0.51
PPFIA4-213ENST00000601609 NLRX1Q86UT6 975 aa18.21■□□□□ 0.51
PPFIA4-213ENST00000601609 FAM126BQ8IXS8 530 aa18.21■□□□□ 0.51
PPFIA4-213ENST00000601609 TDHQ8IZJ6 230 aa18.21■□□□□ 0.51
PPFIA4-213ENST00000601609 FBXL16Q8N461 479 aa18.21■□□□□ 0.51
PPFIA4-213ENST00000601609 PHKBQ93100 1093 aa18.21■□□□□ 0.51
PPFIA4-213ENST00000601609 SLC26A6Q9BXS9 759 aa18.21■□□□□ 0.51
PPFIA4-213ENST00000601609 PPP1R12CQ9BZL4 782 aa18.21■□□□□ 0.51
PPFIA4-213ENST00000601609 MLXIPQ9HAP2 919 aa18.21■□□□□ 0.51
PPFIA4-213ENST00000601609 NCOA5Q9HCD5 579 aaKnown RBP18.21■□□□□ 0.51
PPFIA4-213ENST00000601609 TRIOBPQ9H2D6 2365 aa18.2■□□□□ 0.5
PPFIA4-213ENST00000601609 NID2Q14112 1375 aa18.2■□□□□ 0.5
PPFIA4-213ENST00000601609 SMCO2A6NFE2 343 aa18.2■□□□□ 0.5
PPFIA4-213ENST00000601609 KIAA0355O15063 1070 aa18.2■□□□□ 0.5
PPFIA4-213ENST00000601609 RGS20O76081 388 aa18.2■□□□□ 0.5
PPFIA4-213ENST00000601609 SCG2P13521 617 aa18.2■□□□□ 0.5
PPFIA4-213ENST00000601609 UBA1P22314 1058 aaKnown RBP18.2■□□□□ 0.5
PPFIA4-213ENST00000601609 PDIA3P30101 505 aaKnown RBP18.2■□□□□ 0.5
PPFIA4-213ENST00000601609 DGKDQ16760 1214 aa18.2■□□□□ 0.5
PPFIA4-213ENST00000601609 PFKFB3Q16875 520 aaPredicted RBP18.2■□□□□ 0.5
PPFIA4-213ENST00000601609 PCNX4Q63HM2 1172 aa18.2■□□□□ 0.5
PPFIA4-213ENST00000601609 SPATA33Q96N06 139 aa18.2■□□□□ 0.5
PPFIA4-213ENST00000601609 SEZ6LQ9BYH1 1024 aa18.2■□□□□ 0.5
PPFIA4-213ENST00000601609 BARHL2Q9NY43 387 aa18.2■□□□□ 0.5
PPFIA4-213ENST00000601609 PCDHA6Q9UN73 950 aa18.2■□□□□ 0.5
PPFIA4-213ENST00000601609 PCDHA8Q9Y5H6 950 aa18.2■□□□□ 0.5
PPFIA4-213ENST00000601609 NOP56O00567 594 aaKnown RBP18.19■□□□□ 0.5
PPFIA4-213ENST00000601609 FIBPO43427 364 aa18.19■□□□□ 0.5
PPFIA4-213ENST00000601609 ANAPC15P60006 121 aa18.19■□□□□ 0.5
PPFIA4-213ENST00000601609 MRPS9P82933 396 aaKnown RBP18.19■□□□□ 0.5
PPFIA4-213ENST00000601609 TYW1BQ6NUM6 668 aa18.19■□□□□ 0.5
PPFIA4-213ENST00000601609 XRRA1Q6P2D8 792 aa18.19■□□□□ 0.5
PPFIA4-213ENST00000601609 TRIM22Q8IYM9 498 aa18.19■□□□□ 0.5
PPFIA4-213ENST00000601609 CCDC12Q8WUD4 166 aaPredicted RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms