RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 PPP1R14BQ96C90 147 aa13.2□□□□□ -0.3
SHANK2-218ENST00000601538 CUEDC2Q9H467 287 aa13.2□□□□□ -0.3
SHANK2-218ENST00000601538 CDK13Q14004 1512 aaKnown RBP13.2□□□□□ -0.3
SHANK2-218ENST00000601538 A6NJR5 290 aa13.2□□□□□ -0.3
SHANK2-218ENST00000601538 MEIS3Q99687 375 aa13.2□□□□□ -0.3
SHANK2-218ENST00000601538 TRPM1Q7Z4N2 1603 aa13.2□□□□□ -0.3
SHANK2-218ENST00000601538 EXOC1LA0A1B0GW35 172 aa13.2□□□□□ -0.3
SHANK2-218ENST00000601538 ACADSP16219 412 aa13.2□□□□□ -0.3
SHANK2-218ENST00000601538 IGBP1P78318 339 aa13.2□□□□□ -0.3
SHANK2-218ENST00000601538 MRPS26Q9BYN8 205 aaKnown RBP13.2□□□□□ -0.3
SHANK2-218ENST00000601538 FAM129AQ9BZQ8 928 aa13.2□□□□□ -0.3
SHANK2-218ENST00000601538 ATP11BQ9Y2G3 1177 aa13.2□□□□□ -0.3
SHANK2-218ENST00000601538 HP1BP3Q5SSJ5 553 aaPredicted RBP13.19□□□□□ -0.3
SHANK2-218ENST00000601538 GALNT17Q6IS24 598 aa13.19□□□□□ -0.3
SHANK2-218ENST00000601538 MAML1Q92585 1016 aa13.19□□□□□ -0.3
SHANK2-218ENST00000601538 KIF17Q9P2E2 1029 aa13.19□□□□□ -0.3
SHANK2-218ENST00000601538 BAZ2BQ9UIF8 2168 aaKnown RBP13.19□□□□□ -0.3
SHANK2-218ENST00000601538 PYGMP11217 842 aa13.19□□□□□ -0.3
SHANK2-218ENST00000601538 DAB2P98082 770 aa13.19□□□□□ -0.3
SHANK2-218ENST00000601538 LONRF3Q496Y0 759 aa13.19□□□□□ -0.3
SHANK2-218ENST00000601538 HORMAD1Q86X24 394 aa13.19□□□□□ -0.3
SHANK2-218ENST00000601538 MYOCDQ8IZQ8 938 aa13.19□□□□□ -0.3
SHANK2-218ENST00000601538 NAF1Q96HR8 494 aaKnown RBP13.19□□□□□ -0.3
SHANK2-218ENST00000601538 POLKQ9UBT6 870 aa13.19□□□□□ -0.3
SHANK2-218ENST00000601538 ZNF711Q9Y462 761 aa13.19□□□□□ -0.3
SHANK2-218ENST00000601538 SGK1O00141 431 aa13.19□□□□□ -0.3
SHANK2-218ENST00000601538 STRNO43815 780 aa13.19□□□□□ -0.3
SHANK2-218ENST00000601538 LRMPQ12912 555 aa13.19□□□□□ -0.3
SHANK2-218ENST00000601538 POC1B-GALNT4F8VUJ3 575 aa13.19□□□□□ -0.3
SHANK2-218ENST00000601538 RPS6KA5O75582 802 aa13.19□□□□□ -0.3
SHANK2-218ENST00000601538 ECEL1O95672 775 aa13.19□□□□□ -0.3
SHANK2-218ENST00000601538 SF3A3Q12874 501 aaKnown RBP eCLIP13.19□□□□□ -0.36e-6■□□□□ 10.9
SHANK2-218ENST00000601538 NEK8Q86SG6 692 aa13.19□□□□□ -0.3
SHANK2-218ENST00000601538 PLIN2Q99541 437 aa13.19□□□□□ -0.3
SHANK2-218ENST00000601538 MAPK8IP1Q9UQF2 711 aa13.19□□□□□ -0.3
SHANK2-218ENST00000601538 ABCA9Q8IUA7 1624 aa13.19□□□□□ -0.3
SHANK2-218ENST00000601538 PRDM15P57071 1507 aaPredicted RBP13.19□□□□□ -0.3
SHANK2-218ENST00000601538 GNPTABQ3T906 1256 aa13.19□□□□□ -0.3
SHANK2-218ENST00000601538 MPRIPQ6WCQ1 1025 aa13.19□□□□□ -0.3
SHANK2-218ENST00000601538 PIK3AP1Q6ZUJ8 805 aa13.19□□□□□ -0.3
SHANK2-218ENST00000601538 TTC6Q86TZ1 520 aa13.19□□□□□ -0.3
SHANK2-218ENST00000601538 PLA2G4DQ86XP0 818 aa13.19□□□□□ -0.3
SHANK2-218ENST00000601538 SYT2Q8N9I0 419 aaPredicted RBP13.19□□□□□ -0.3
SHANK2-218ENST00000601538 DHX38Q92620 1227 aaKnown RBP13.19□□□□□ -0.3
SHANK2-218ENST00000601538 STK17AQ9UEE5 414 aa13.19□□□□□ -0.3
SHANK2-218ENST00000601538 ZBTB21Q9ULJ3 1066 aa13.19□□□□□ -0.3
SHANK2-218ENST00000601538 DIS3Q9Y2L1 958 aaKnown RBP13.19□□□□□ -0.3
SHANK2-218ENST00000601538 ARHGEF10O15013 1369 aa13.19□□□□□ -0.3
SHANK2-218ENST00000601538 ZBTB24O43167 697 aaPredicted RBP13.19□□□□□ -0.3
SHANK2-218ENST00000601538 PSMC1P62191 440 aaKnown RBP13.19□□□□□ -0.3
SHANK2-218ENST00000601538 ADRM1Q16186 407 aa13.19□□□□□ -0.3
SHANK2-218ENST00000601538 CEP85Q6P2H3 762 aa13.19□□□□□ -0.3
SHANK2-218ENST00000601538 SLFN12Q8IYM2 578 aa13.19□□□□□ -0.3
SHANK2-218ENST00000601538 IFNL2Q8IZJ0 200 aa13.19□□□□□ -0.3
SHANK2-218ENST00000601538 REXO1Q8N1G1 1221 aaKnown RBP13.19□□□□□ -0.3
SHANK2-218ENST00000601538 CATSPER2Q96P56 530 aa13.19□□□□□ -0.3
SHANK2-218ENST00000601538 SUN2Q9UH99 717 aa13.19□□□□□ -0.3
SHANK2-218ENST00000601538 SRRM3A6NNA2 597 aaPredicted RBP13.19□□□□□ -0.3
SHANK2-218ENST00000601538 ZMYND12Q9H0C1 365 aa13.19□□□□□ -0.3
SHANK2-218ENST00000601538 E2F6O75461 281 aa13.18□□□□□ -0.3
SHANK2-218ENST00000601538 CD19P15391 556 aa13.18□□□□□ -0.3
SHANK2-218ENST00000601538 TLK1Q9UKI8 766 aa13.18□□□□□ -0.3
SHANK2-218ENST00000601538 PNMA2Q9UL42 364 aa13.18□□□□□ -0.3
SHANK2-218ENST00000601538 DISP3Q9P2K9 1392 aa13.18□□□□□ -0.3
SHANK2-218ENST00000601538 H2AFZP0C0S5 128 aa13.18□□□□□ -0.3
SHANK2-218ENST00000601538 CAV1Q03135 178 aa13.18□□□□□ -0.3
SHANK2-218ENST00000601538 CUL4AQ13619 759 aa13.18□□□□□ -0.3
SHANK2-218ENST00000601538 H2AFVQ71UI9 128 aa13.18□□□□□ -0.3
SHANK2-218ENST00000601538 LRWD1Q9UFC0 647 aa13.18□□□□□ -0.3
SHANK2-218ENST00000601538 PODXLO00592 558 aa13.18□□□□□ -0.3
SHANK2-218ENST00000601538 SLC27A2O14975 620 aa13.18□□□□□ -0.3
SHANK2-218ENST00000601538 ABCB4P21439 1286 aa13.18□□□□□ -0.3
SHANK2-218ENST00000601538 SPATA1Q5VX52 437 aa13.18□□□□□ -0.3
SHANK2-218ENST00000601538 COG1Q8WTW3 980 aa13.18□□□□□ -0.3
SHANK2-218ENST00000601538 GGA2Q9UJY4 613 aa13.18□□□□□ -0.3
SHANK2-218ENST00000601538 PRR23D1E9PI22 279 aaPredicted RBP13.18□□□□□ -0.3
SHANK2-218ENST00000601538 PRR23D2P0DMB1 279 aaPredicted RBP13.18□□□□□ -0.3
SHANK2-218ENST00000601538 PDE6AP16499 860 aa13.18□□□□□ -0.3
SHANK2-218ENST00000601538 TNNI1P19237 187 aa13.18□□□□□ -0.3
SHANK2-218ENST00000601538 ADCY7P51828 1080 aa13.18□□□□□ -0.3
SHANK2-218ENST00000601538 MYO1EQ12965 1108 aa13.18□□□□□ -0.3
SHANK2-218ENST00000601538 MAGOHBQ96A72 148 aaKnown RBP13.18□□□□□ -0.3
SHANK2-218ENST00000601538 PPCSQ9HAB8 311 aa13.18□□□□□ -0.3
SHANK2-218ENST00000601538 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.18□□□□□ -0.3
SHANK2-218ENST00000601538 MT-ND3P03897 115 aa13.18□□□□□ -0.3
SHANK2-218ENST00000601538 MORF4L2Q15014 288 aa13.18□□□□□ -0.3
SHANK2-218ENST00000601538 PIK3R5Q8WYR1 880 aa13.18□□□□□ -0.3
SHANK2-218ENST00000601538 STRIP2Q9ULQ0 834 aa13.18□□□□□ -0.3
SHANK2-218ENST00000601538 ATP8A1Q9Y2Q0 1164 aa13.18□□□□□ -0.3
SHANK2-218ENST00000601538 WBP4O75554 376 aaKnown RBP13.18□□□□□ -0.3
SHANK2-218ENST00000601538 LDHBP07195 334 aaKnown RBP13.18□□□□□ -0.3
SHANK2-218ENST00000601538 BASP1P80723 227 aaKnown RBP13.18□□□□□ -0.3
SHANK2-218ENST00000601538 YTHDF3Q7Z739 585 aaKnown RBP13.18□□□□□ -0.3
SHANK2-218ENST00000601538 SKAP1Q86WV1 359 aa13.18□□□□□ -0.3
SHANK2-218ENST00000601538 WDR75Q8IWA0 830 aaKnown RBP13.18□□□□□ -0.3
SHANK2-218ENST00000601538 EPB41L5Q9HCM4 733 aa13.18□□□□□ -0.3
SHANK2-218ENST00000601538 POLR3EQ9NVU0 708 aa13.18□□□□□ -0.3
SHANK2-218ENST00000601538 PYCARDQ9ULZ3 195 aa13.18□□□□□ -0.3
SHANK2-218ENST00000601538 BLOC1S6Q9UL45 172 aa13.18□□□□□ -0.3
SHANK2-218ENST00000601538 PMS1P54277 932 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms