RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 FGD1P98174 961 aa19.82■□□□□ 0.76
HERC3-214ENST00000601319 FAAP100Q0VG06 881 aa19.82■□□□□ 0.76
HERC3-214ENST00000601319 KCNV1Q6PIU1 500 aa19.82■□□□□ 0.76
HERC3-214ENST00000601319 Q6ZUG5 572 aa19.82■□□□□ 0.76
HERC3-214ENST00000601319 FAM126BQ8IXS8 530 aa19.82■□□□□ 0.76
HERC3-214ENST00000601319 IL31RAQ8NI17 732 aa19.82■□□□□ 0.76
HERC3-214ENST00000601319 UBE2OQ9C0C9 1292 aaKnown RBP19.82■□□□□ 0.76
HERC3-214ENST00000601319 TRIM43BA6NCK2 446 aa19.81■□□□□ 0.76
HERC3-214ENST00000601319 MEIS2O14770 477 aa19.81■□□□□ 0.76
HERC3-214ENST00000601319 STAM2O75886 525 aa19.81■□□□□ 0.76
HERC3-214ENST00000601319 GH1P01241 217 aa19.81■□□□□ 0.76
HERC3-214ENST00000601319 CASTP20810 708 aaKnown RBP19.81■□□□□ 0.76
HERC3-214ENST00000601319 CCND2P30279 289 aa19.81■□□□□ 0.76
HERC3-214ENST00000601319 EVCP57679 992 aa19.81■□□□□ 0.76
HERC3-214ENST00000601319 PURAQ00577 322 aaKnown RBP19.81■□□□□ 0.76
HERC3-214ENST00000601319 MDM2Q00987 491 aaPredicted RBP19.81■□□□□ 0.76
HERC3-214ENST00000601319 ARHGAP1Q07960 439 aa19.81■□□□□ 0.76
HERC3-214ENST00000601319 PPP1R18Q6NYC8 613 aa19.81■□□□□ 0.76
HERC3-214ENST00000601319 SEPT14Q6ZU15 432 aa19.81■□□□□ 0.76
HERC3-214ENST00000601319 SH3RF1Q7Z6J0 888 aa19.81■□□□□ 0.76
HERC3-214ENST00000601319 FCHSD1Q86WN1 690 aa19.81■□□□□ 0.76
HERC3-214ENST00000601319 TDHQ8IZJ6 230 aa19.81■□□□□ 0.76
HERC3-214ENST00000601319 BRF1Q92994 677 aa19.81■□□□□ 0.76
HERC3-214ENST00000601319 CUL5Q93034 780 aa19.81■□□□□ 0.76
HERC3-214ENST00000601319 EMID1Q96A84 441 aaPredicted RBP19.81■□□□□ 0.76
HERC3-214ENST00000601319 TRIM43Q96BQ3 446 aaPredicted RBP19.81■□□□□ 0.76
HERC3-214ENST00000601319 TM6SF1Q9BZW5 370 aa19.81■□□□□ 0.76
HERC3-214ENST00000601319 TBX21Q9UL17 535 aa19.81■□□□□ 0.76
HERC3-214ENST00000601319 CCDC196A0A1B0GTZ2 297 aa19.8■□□□□ 0.76
HERC3-214ENST00000601319 hCG_1984214I3L0E3 225 aa19.8■□□□□ 0.76
HERC3-214ENST00000601319 RGS20O76081 388 aa19.8■□□□□ 0.76
HERC3-214ENST00000601319 ITGA7Q13683 1181 aa19.8■□□□□ 0.76
HERC3-214ENST00000601319 ZNF713Q8N859 430 aaPredicted RBP19.8■□□□□ 0.76
HERC3-214ENST00000601319 SMARCC2Q8TAQ2 1214 aa19.8■□□□□ 0.76
HERC3-214ENST00000601319 COPS5Q92905 334 aa19.8■□□□□ 0.76
HERC3-214ENST00000601319 VTI1AQ96AJ9 217 aa19.8■□□□□ 0.76
HERC3-214ENST00000601319 MTG1Q9BT17 334 aaPredicted RBP19.8■□□□□ 0.76
HERC3-214ENST00000601319 ZSWIM6Q9HCJ5 1215 aa19.8■□□□□ 0.76
HERC3-214ENST00000601319 FAM217BQ9NTX9 383 aaPredicted RBP19.8■□□□□ 0.76
HERC3-214ENST00000601319 DDX41Q9UJV9 622 aaKnown RBP19.8■□□□□ 0.76
HERC3-214ENST00000601319 MRVI1Q9Y6F6 885 aa19.8■□□□□ 0.76
HERC3-214ENST00000601319 GRIN2DO15399 1336 aa19.79■□□□□ 0.76
HERC3-214ENST00000601319 TLR3O15455 904 aaKnown RBP19.79■□□□□ 0.76
HERC3-214ENST00000601319 MYCLP12524 364 aaPredicted RBP19.79■□□□□ 0.76
HERC3-214ENST00000601319 METAP2P50579 478 aaKnown RBP eCLIP19.79■□□□□ 0.76
HERC3-214ENST00000601319 APOBRQ0VD83 1088 aa19.79■□□□□ 0.76
HERC3-214ENST00000601319 XRRA1Q6P2D8 792 aa19.79■□□□□ 0.76
HERC3-214ENST00000601319 RUFY3Q7L099 469 aa19.79■□□□□ 0.76
HERC3-214ENST00000601319 CCDC82Q8N4S0 544 aa19.79■□□□□ 0.76
HERC3-214ENST00000601319 PSTPIP2Q9H939 334 aa19.79■□□□□ 0.76
HERC3-214ENST00000601319 TMEM39AQ9NV64 488 aa19.79■□□□□ 0.76
HERC3-214ENST00000601319 SZT2Q5T011 3432 aa19.79■□□□□ 0.76
HERC3-214ENST00000601319 hCG_1642624A0A1W2PR95 340 aa19.78■□□□□ 0.76
HERC3-214ENST00000601319 CD4P01730 458 aa19.78■□□□□ 0.76
HERC3-214ENST00000601319 MMP3P08254 477 aa19.78■□□□□ 0.76
HERC3-214ENST00000601319 TGFB3P10600 412 aa19.78■□□□□ 0.76
HERC3-214ENST00000601319 CDC27P30260 824 aa19.78■□□□□ 0.76
HERC3-214ENST00000601319 LY6KQ17RY6 165 aa19.78■□□□□ 0.76
HERC3-214ENST00000601319 WWC2Q6AWC2 1192 aa19.78■□□□□ 0.76
HERC3-214ENST00000601319 USP17L6PQ6QN14 398 aa19.78■□□□□ 0.76
HERC3-214ENST00000601319 HEATR3Q7Z4Q2 680 aa19.78■□□□□ 0.76
HERC3-214ENST00000601319 INPP4AQ96PE3 977 aaPredicted RBP19.78■□□□□ 0.76
HERC3-214ENST00000601319 PCDH10Q9P2E7 1040 aa19.78■□□□□ 0.76
HERC3-214ENST00000601319 EIF5BO60841 1220 aaKnown RBP19.77■□□□□ 0.76
HERC3-214ENST00000601319 MYL3P08590 195 aa19.77■□□□□ 0.76
HERC3-214ENST00000601319 RAG1P15918 1043 aa19.77■□□□□ 0.76
HERC3-214ENST00000601319 MRPS9P82933 396 aaKnown RBP19.77■□□□□ 0.76
HERC3-214ENST00000601319 LRIT3Q3SXY7 679 aa19.77■□□□□ 0.76
HERC3-214ENST00000601319 GNPTABQ3T906 1256 aa19.77■□□□□ 0.76
HERC3-214ENST00000601319 PCNX4Q63HM2 1172 aa19.77■□□□□ 0.76
HERC3-214ENST00000601319 GPKOWQ92917 476 aaPredicted RBP eCLIP19.77■□□□□ 0.76
HERC3-214ENST00000601319 BADQ92934 168 aa19.77■□□□□ 0.76
HERC3-214ENST00000601319 CYP46A1Q9Y6A2 500 aa19.77■□□□□ 0.76
HERC3-214ENST00000601319 HOXD8P13378 290 aaPredicted RBP19.76■□□□□ 0.75
HERC3-214ENST00000601319 ITGB8P26012 769 aa19.76■□□□□ 0.75
HERC3-214ENST00000601319 ICAM3P32942 547 aa19.76■□□□□ 0.75
HERC3-214ENST00000601319 PSMC6P62333 389 aa19.76■□□□□ 0.75
HERC3-214ENST00000601319 LAMC2Q13753 1193 aa19.76■□□□□ 0.75
HERC3-214ENST00000601319 PPTC7Q8NI37 304 aa19.76■□□□□ 0.75
HERC3-214ENST00000601319 AFG1LQ8WV93 481 aa19.76■□□□□ 0.75
HERC3-214ENST00000601319 BARHL2Q9NY43 387 aa19.76■□□□□ 0.75
HERC3-214ENST00000601319 NAP1L2Q9ULW6 460 aaPredicted RBP19.76■□□□□ 0.75
HERC3-214ENST00000601319 STXBP3O00186 592 aa19.75■□□□□ 0.75
HERC3-214ENST00000601319 TIMP1P01033 207 aa19.75■□□□□ 0.75
HERC3-214ENST00000601319 UBA1P22314 1058 aaKnown RBP19.75■□□□□ 0.75
HERC3-214ENST00000601319 ANAPC15P60006 121 aa19.75■□□□□ 0.75
HERC3-214ENST00000601319 TOB2Q14106 344 aaPredicted RBP19.75■□□□□ 0.75
HERC3-214ENST00000601319 TYW1BQ6NUM6 668 aa19.75■□□□□ 0.75
HERC3-214ENST00000601319 NFRKBQ6P4R8 1299 aa19.75■□□□□ 0.75
HERC3-214ENST00000601319 ALDH8A1Q9H2A2 487 aaPredicted RBP19.75■□□□□ 0.75
HERC3-214ENST00000601319 V9GY48 417 aaPredicted RBP19.75■□□□□ 0.75
HERC3-214ENST00000601319 SPDYE3A6NKU9 549 aa19.74■□□□□ 0.75
HERC3-214ENST00000601319 FIBPO43427 364 aa19.74■□□□□ 0.75
HERC3-214ENST00000601319 ADD1P35611 737 aaKnown RBP19.74■□□□□ 0.75
HERC3-214ENST00000601319 NAPAP54920 295 aa19.74■□□□□ 0.75
HERC3-214ENST00000601319 PTPN11Q06124 597 aaPredicted RBP19.74■□□□□ 0.75
HERC3-214ENST00000601319 DGKDQ16760 1214 aa19.74■□□□□ 0.75
HERC3-214ENST00000601319 PFKFB3Q16875 520 aaPredicted RBP19.74■□□□□ 0.75
HERC3-214ENST00000601319 CELF3Q5SZQ8 465 aaKnown RBP19.74■□□□□ 0.75
HERC3-214ENST00000601319 MYSM1Q5VVJ2 828 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms