RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 IL27Q8NEV9 243 aa7.19□□□□□ -1.26
VRK3-220ENST00000600259 CAGE1Q8TC20 777 aa7.19□□□□□ -1.26
VRK3-220ENST00000600259 AFAP1L1Q8TED9 768 aa7.19□□□□□ -1.26
VRK3-220ENST00000600259 ANKS1AQ92625 1134 aa7.19□□□□□ -1.26
VRK3-220ENST00000600259 WNT8BQ93098 351 aa7.19□□□□□ -1.26
VRK3-220ENST00000600259 EVI5LQ96CN4 794 aa7.19□□□□□ -1.26
VRK3-220ENST00000600259 RAD9AQ99638 391 aa7.19□□□□□ -1.26
VRK3-220ENST00000600259 UBA5Q9GZZ9 404 aa7.19□□□□□ -1.26
VRK3-220ENST00000600259 HDAC6Q9UBN7 1215 aa7.19□□□□□ -1.26
VRK3-220ENST00000600259 DDX41Q9UJV9 622 aaKnown RBP7.19□□□□□ -1.26
VRK3-220ENST00000600259 PNMA2Q9UL42 364 aa7.19□□□□□ -1.26
VRK3-220ENST00000600259 MUC6Q6W4X9 2439 aa7.18□□□□□ -1.26
VRK3-220ENST00000600259 OPLAHO14841 1288 aa7.18□□□□□ -1.26
VRK3-220ENST00000600259 RGS20O76081 388 aa7.18□□□□□ -1.26
VRK3-220ENST00000600259 GJB5O95377 273 aa7.18□□□□□ -1.26
VRK3-220ENST00000600259 GOLGA8HP0CJ92 632 aa7.18□□□□□ -1.26
VRK3-220ENST00000600259 PDE1AP54750 535 aa7.18□□□□□ -1.26
VRK3-220ENST00000600259 ZNF200P98182 395 aaPredicted RBP7.18□□□□□ -1.26
VRK3-220ENST00000600259 MCMDC2Q4G0Z9 681 aa7.18□□□□□ -1.26
VRK3-220ENST00000600259 RRP12Q5JTH9 1297 aaKnown RBP7.18□□□□□ -1.26
VRK3-220ENST00000600259 CNKSR3Q6P9H4 555 aa7.18□□□□□ -1.26
VRK3-220ENST00000600259 LRRC8DQ7L1W4 858 aa7.18□□□□□ -1.26
VRK3-220ENST00000600259 TICAM2Q86XR7 235 aa7.18□□□□□ -1.26
VRK3-220ENST00000600259 TBC1D10CQ8IV04 446 aa7.18□□□□□ -1.26
VRK3-220ENST00000600259 FAM178BQ8IXR5 827 aa7.18□□□□□ -1.26
VRK3-220ENST00000600259 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.18□□□□□ -1.26
VRK3-220ENST00000600259 EMID1Q96A84 441 aaPredicted RBP7.18□□□□□ -1.26
VRK3-220ENST00000600259 IWS1Q96ST2 819 aa7.18□□□□□ -1.26
VRK3-220ENST00000600259 OSBPL7Q9BZF2 842 aa7.18□□□□□ -1.26
VRK3-220ENST00000600259 GTF2IRD1Q9UHL9 959 aa7.18□□□□□ -1.26
VRK3-220ENST00000600259 ZMYM6O95789 1325 aa7.18□□□□□ -1.26
VRK3-220ENST00000600259 ABHD14A-ACY1A0A1B0GW23 586 aa7.17□□□□□ -1.26
VRK3-220ENST00000600259 LINC01553A4QN01 128 aa7.17□□□□□ -1.26
VRK3-220ENST00000600259 PARNO95453 639 aaKnown RBP7.17□□□□□ -1.26
VRK3-220ENST00000600259 F2P00734 622 aa7.17□□□□□ -1.26
VRK3-220ENST00000600259 GH1P01241 217 aa7.17□□□□□ -1.26
VRK3-220ENST00000600259 PCP11498 1178 aaKnown RBP7.17□□□□□ -1.26
VRK3-220ENST00000600259 CASTP20810 708 aaKnown RBP7.17□□□□□ -1.26
VRK3-220ENST00000600259 PSEN2P49810 448 aa7.17□□□□□ -1.26
VRK3-220ENST00000600259 HAND2P61296 217 aa7.17□□□□□ -1.26
VRK3-220ENST00000600259 HTRA4P83105 476 aaPredicted RBP7.17□□□□□ -1.26
VRK3-220ENST00000600259 GHRHRQ02643 423 aa7.17□□□□□ -1.26
VRK3-220ENST00000600259 NMIQ13287 307 aaPredicted RBP7.17□□□□□ -1.26
VRK3-220ENST00000600259 PTK7Q13308 1070 aa7.17□□□□□ -1.26
VRK3-220ENST00000600259 LEXMQ3ZCV2 418 aa7.17□□□□□ -1.26
VRK3-220ENST00000600259 TMEM31Q5JXX7 168 aa7.17□□□□□ -1.26
VRK3-220ENST00000600259 GPATCH4Q5T3I0 446 aaKnown RBP7.17□□□□□ -1.26
VRK3-220ENST00000600259 ZNF618Q5T7W0 954 aa7.17□□□□□ -1.26
VRK3-220ENST00000600259 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.17□□□□□ -1.26
VRK3-220ENST00000600259 SEPT14Q6ZU15 432 aa7.17□□□□□ -1.26
VRK3-220ENST00000600259 DGKHQ86XP1 1220 aa7.17□□□□□ -1.26
VRK3-220ENST00000600259 ADGRF4Q8IZF3 695 aa7.17□□□□□ -1.26
VRK3-220ENST00000600259 NSUN6Q8TEA1 469 aaKnown RBP7.17□□□□□ -1.26
VRK3-220ENST00000600259 GDPD5Q8WTR4 605 aa7.17□□□□□ -1.26
VRK3-220ENST00000600259 JMJD4Q9H9V9 463 aa7.17□□□□□ -1.26
VRK3-220ENST00000600259 RAD50Q92878 1312 aa7.17□□□□□ -1.26
VRK3-220ENST00000600259 POTEB3A0JP26 581 aa7.16□□□□□ -1.26
VRK3-220ENST00000600259 B4DLN1 442 aa7.16□□□□□ -1.26
VRK3-220ENST00000600259 PPFIA4O75335 1185 aa7.16□□□□□ -1.26
VRK3-220ENST00000600259 EIF3JO75822 258 aaKnown RBP7.16□□□□□ -1.26
VRK3-220ENST00000600259 NR3C2P08235 984 aa7.16□□□□□ -1.26
VRK3-220ENST00000600259 HOXC8P31273 242 aa7.16□□□□□ -1.26
VRK3-220ENST00000600259 KCNJ6P48051 423 aa7.16□□□□□ -1.26
VRK3-220ENST00000600259 HSD17B4P51659 736 aa7.16□□□□□ -1.26
VRK3-220ENST00000600259 MRPL12P52815 198 aaKnown RBP7.16□□□□□ -1.26
VRK3-220ENST00000600259 CHMP4BP1P59074 171 aa7.16□□□□□ -1.26
VRK3-220ENST00000600259 SP2Q02086 613 aa7.16□□□□□ -1.26
VRK3-220ENST00000600259 COL19A1Q14993 1142 aa7.16□□□□□ -1.26
VRK3-220ENST00000600259 STXBP2Q15833 593 aa7.16□□□□□ -1.26
VRK3-220ENST00000600259 DGKDQ16760 1214 aa7.16□□□□□ -1.26
VRK3-220ENST00000600259 SLC35G1Q2M3R5 365 aa7.16□□□□□ -1.26
VRK3-220ENST00000600259 QRICH1Q2TAL8 776 aa7.16□□□□□ -1.26
VRK3-220ENST00000600259 USH1GQ495M9 461 aa7.16□□□□□ -1.26
VRK3-220ENST00000600259 ANKRD45Q5TZF3 282 aa7.16□□□□□ -1.26
VRK3-220ENST00000600259 MYSM1Q5VVJ2 828 aa7.16□□□□□ -1.26
VRK3-220ENST00000600259 POTEBQ6S5H4 581 aa7.16□□□□□ -1.26
VRK3-220ENST00000600259 MFSD6Q6ZSS7 791 aa7.16□□□□□ -1.26
VRK3-220ENST00000600259 CHST3Q7LGC8 479 aa7.16□□□□□ -1.26
VRK3-220ENST00000600259 DBF4BQ8NFT6 615 aa7.16□□□□□ -1.26
VRK3-220ENST00000600259 NEK9Q8TD19 979 aa7.16□□□□□ -1.26
VRK3-220ENST00000600259 SP7Q8TDD2 431 aaPredicted RBP7.16□□□□□ -1.26
VRK3-220ENST00000600259 MTMR8Q96EF0 704 aa7.16□□□□□ -1.26
VRK3-220ENST00000600259 TGS1Q96RS0 853 aaKnown RBP7.16□□□□□ -1.26
VRK3-220ENST00000600259 RMDN3Q96TC7 470 aa7.16□□□□□ -1.26
VRK3-220ENST00000600259 ZKSCAN3Q9BRR0 538 aa7.16□□□□□ -1.26
VRK3-220ENST00000600259 C16orf70Q9BSU1 422 aa7.16□□□□□ -1.26
VRK3-220ENST00000600259 BCAS3Q9H6U6 928 aa7.16□□□□□ -1.26
VRK3-220ENST00000600259 UBE2ZQ9H832 354 aaPredicted RBP7.16□□□□□ -1.26
VRK3-220ENST00000600259 TOMM22Q9NS69 142 aa7.16□□□□□ -1.26
VRK3-220ENST00000600259 NOD1Q9Y239 953 aa7.16□□□□□ -1.26
VRK3-220ENST00000600259 ABCB11O95342 1321 aa7.16□□□□□ -1.26
VRK3-220ENST00000600259 NEDD4P46934 1319 aa7.16□□□□□ -1.26
VRK3-220ENST00000600259 PTPRSQ13332 1948 aa7.15□□□□□ -1.26
VRK3-220ENST00000600259 TRIP12Q14669 1992 aaPredicted RBP7.15□□□□□ -1.26
VRK3-220ENST00000600259 FAM86C2PA6NEL3 165 aa7.15□□□□□ -1.26
VRK3-220ENST00000600259 GRXCR2A6NFK2 248 aa7.15□□□□□ -1.26
VRK3-220ENST00000600259 PPP1R11O60927 126 aaPredicted RBP7.15□□□□□ -1.26
VRK3-220ENST00000600259 EFCAB14O75071 495 aa7.15□□□□□ -1.26
VRK3-220ENST00000600259 LGR5O75473 907 aa7.15□□□□□ -1.26
VRK3-220ENST00000600259 LAMC2Q13753 1193 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms