RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 LY6KQ17RY6 165 aa13.87□□□□□ -0.19
ZNF548-209ENST00000598895 TRIM60Q495X7 471 aa13.87□□□□□ -0.19
ZNF548-209ENST00000598895 DUSP28Q4G0W2 176 aa13.87□□□□□ -0.19
ZNF548-209ENST00000598895 CCSAPQ6IQ19 270 aaPredicted RBP13.87□□□□□ -0.19
ZNF548-209ENST00000598895 TYW1BQ6NUM6 668 aa13.87□□□□□ -0.19
ZNF548-209ENST00000598895 OR6J1Q8NGC5 347 aa13.87□□□□□ -0.19
ZNF548-209ENST00000598895 SCFD2Q8WU76 684 aa13.87□□□□□ -0.19
ZNF548-209ENST00000598895 VTI1AQ96AJ9 217 aa13.87□□□□□ -0.19
ZNF548-209ENST00000598895 IWS1Q96ST2 819 aa13.87□□□□□ -0.19
ZNF548-209ENST00000598895 SLC26A6Q9BXS9 759 aa13.87□□□□□ -0.19
ZNF548-209ENST00000598895 PSTPIP2Q9H939 334 aa13.87□□□□□ -0.19
ZNF548-209ENST00000598895 STARD7Q9NQZ5 370 aa13.87□□□□□ -0.19
ZNF548-209ENST00000598895 NR2E3Q9Y5X4 410 aa13.87□□□□□ -0.19
ZNF548-209ENST00000598895 NID2Q14112 1375 aa13.86□□□□□ -0.19
ZNF548-209ENST00000598895 FSD2A1L4K1 749 aa13.86□□□□□ -0.19
ZNF548-209ENST00000598895 STXBP3O00186 592 aa13.86□□□□□ -0.19
ZNF548-209ENST00000598895 CCND2P30279 289 aa13.86□□□□□ -0.19
ZNF548-209ENST00000598895 AK2P54819 239 aa13.86□□□□□ -0.19
ZNF548-209ENST00000598895 EVCP57679 992 aa13.86□□□□□ -0.19
ZNF548-209ENST00000598895 TTLL4Q14679 1199 aa13.86□□□□□ -0.19
ZNF548-209ENST00000598895 FSCN1Q16658 493 aaKnown RBP13.86□□□□□ -0.19
ZNF548-209ENST00000598895 CXCL17Q6UXB2 119 aa13.86□□□□□ -0.19
ZNF548-209ENST00000598895 SAMD3Q8N6K7 520 aa13.86□□□□□ -0.19
ZNF548-209ENST00000598895 PCSK9Q8NBP7 692 aaKnown RBP13.86□□□□□ -0.19
ZNF548-209ENST00000598895 PGBD1Q96JS3 809 aa13.86□□□□□ -0.19
ZNF548-209ENST00000598895 RTEL1Q9NZ71 1219 aa13.86□□□□□ -0.19
ZNF548-209ENST00000598895 MKI67P46013 3256 aaKnown RBP13.86□□□□□ -0.19
ZNF548-209ENST00000598895 SMCO2A6NFE2 343 aa13.85□□□□□ -0.19
ZNF548-209ENST00000598895 MOXD2PA6NHM9 499 aa13.85□□□□□ -0.19
ZNF548-209ENST00000598895 TRAK2O60296 914 aa13.85□□□□□ -0.19
ZNF548-209ENST00000598895 EIF3JO75822 258 aaKnown RBP13.85□□□□□ -0.19
ZNF548-209ENST00000598895 MYL3P08590 195 aa13.85□□□□□ -0.19
ZNF548-209ENST00000598895 CST5P28325 142 aaPredicted RBP13.85□□□□□ -0.19
ZNF548-209ENST00000598895 MRE11P49959 708 aa13.85□□□□□ -0.19
ZNF548-209ENST00000598895 AKAP17AQ02040 695 aaKnown RBP13.85□□□□□ -0.19
ZNF548-209ENST00000598895 NTRK3Q16288 839 aa13.85□□□□□ -0.19
ZNF548-209ENST00000598895 PFKFB3Q16875 520 aaPredicted RBP13.85□□□□□ -0.19
ZNF548-209ENST00000598895 GLT1D1Q96MS3 346 aa13.85□□□□□ -0.19
ZNF548-209ENST00000598895 TSEN34Q9BSV6 310 aaKnown RBP13.85□□□□□ -0.19
ZNF548-209ENST00000598895 PRDM5Q9NQX1 630 aaPredicted RBP13.85□□□□□ -0.19
ZNF548-209ENST00000598895 TMEM260Q9NX78 707 aa13.85□□□□□ -0.19
ZNF548-209ENST00000598895 TPCN1Q9ULQ1 816 aa13.85□□□□□ -0.19
ZNF548-209ENST00000598895 MRVI1Q9Y6F6 885 aa13.85□□□□□ -0.19
ZNF548-209ENST00000598895 PDE4DIPQ5VU43 2346 aa13.84□□□□□ -0.19
ZNF548-209ENST00000598895 PIK3CDO00329 1044 aa13.84□□□□□ -0.19
ZNF548-209ENST00000598895 CPLX1O14810 134 aa13.84□□□□□ -0.19
ZNF548-209ENST00000598895 PRPF3O43395 683 aaKnown RBP13.84□□□□□ -0.19
ZNF548-209ENST00000598895 PQBP1O60828 265 aaKnown RBP13.84□□□□□ -0.19
ZNF548-209ENST00000598895 RGS20O76081 388 aa13.84□□□□□ -0.19
ZNF548-209ENST00000598895 SCG2P13521 617 aa13.84□□□□□ -0.19
ZNF548-209ENST00000598895 DDIT3P35638 169 aa13.84□□□□□ -0.19
ZNF548-209ENST00000598895 ADCY7P51828 1080 aa13.84□□□□□ -0.19
ZNF548-209ENST00000598895 NEK4P51957 841 aa13.84□□□□□ -0.19
ZNF548-209ENST00000598895 PSMC6P62333 389 aa13.84□□□□□ -0.19
ZNF548-209ENST00000598895 MRPS9P82933 396 aaKnown RBP13.84□□□□□ -0.19
ZNF548-209ENST00000598895 PKN1Q16512 942 aa13.84□□□□□ -0.19
ZNF548-209ENST00000598895 CCDC62Q6P9F0 684 aa13.84□□□□□ -0.19
ZNF548-209ENST00000598895 VSIG10LQ86VR7 867 aa13.84□□□□□ -0.19
ZNF548-209ENST00000598895 PPP1R13LQ8WUF5 828 aa13.84□□□□□ -0.19
ZNF548-209ENST00000598895 ZNF274Q96GC6 653 aaPredicted RBP13.84□□□□□ -0.19
ZNF548-209ENST00000598895 BARHL2Q9NY43 387 aa13.84□□□□□ -0.19
ZNF548-209ENST00000598895 PCDHA6Q9UN73 950 aa13.84□□□□□ -0.19
ZNF548-209ENST00000598895 Q9Y3F1 56 aa13.84□□□□□ -0.19
ZNF548-209ENST00000598895 PCDHA8Q9Y5H6 950 aa13.84□□□□□ -0.19
ZNF548-209ENST00000598895 DOCK5Q9H7D0 1870 aa13.84□□□□□ -0.19
ZNF548-209ENST00000598895 MYH7BA7E2Y1 1941 aa13.84□□□□□ -0.19
ZNF548-209ENST00000598895 SPDYE3A6NKU9 549 aa13.83□□□□□ -0.2
ZNF548-209ENST00000598895 ADAMTS3O15072 1205 aa13.83□□□□□ -0.2
ZNF548-209ENST00000598895 GH1P01241 217 aa13.83□□□□□ -0.2
ZNF548-209ENST00000598895 IFNAR1P17181 557 aa13.83□□□□□ -0.2
ZNF548-209ENST00000598895 CHMP4BP1P59074 171 aa13.83□□□□□ -0.2
ZNF548-209ENST00000598895 TLE2Q04725 743 aa13.83□□□□□ -0.2
ZNF548-209ENST00000598895 SCRN1Q12765 414 aa13.83□□□□□ -0.2
ZNF548-209ENST00000598895 PPP1R18Q6NYC8 613 aa13.83□□□□□ -0.2
ZNF548-209ENST00000598895 CHRDL2Q6WN34 429 aa13.83□□□□□ -0.2
ZNF548-209ENST00000598895 RNF26Q9BY78 433 aaPredicted RBP13.83□□□□□ -0.2
ZNF548-209ENST00000598895 RIC8AQ9NPQ8 531 aa13.83□□□□□ -0.2
ZNF548-209ENST00000598895 DDX41Q9UJV9 622 aaKnown RBP13.83□□□□□ -0.2
ZNF548-209ENST00000598895 FRMPD4Q14CM0 1322 aa13.83□□□□□ -0.2
ZNF548-209ENST00000598895 GOLGA6L22H0YM25 854 aa13.82□□□□□ -0.2
ZNF548-209ENST00000598895 hCG_1984214I3L0E3 225 aa13.82□□□□□ -0.2
ZNF548-209ENST00000598895 K7ELQ4 463 aaPredicted RBP13.82□□□□□ -0.2
ZNF548-209ENST00000598895 NKRFO15226 690 aaKnown RBP eCLIP13.82□□□□□ -0.2
ZNF548-209ENST00000598895 ZEB2O60315 1214 aa13.82□□□□□ -0.2
ZNF548-209ENST00000598895 LARGE1O95461 756 aa13.82□□□□□ -0.2
ZNF548-209ENST00000598895 CPT1AP50416 773 aa13.82□□□□□ -0.2
ZNF548-209ENST00000598895 NKX3-2P78367 333 aa13.82□□□□□ -0.2
ZNF548-209ENST00000598895 ARHGAP1Q07960 439 aa13.82□□□□□ -0.2
ZNF548-209ENST00000598895 SSRP1Q08945 709 aaKnown RBP13.82□□□□□ -0.2
ZNF548-209ENST00000598895 SNX17Q15036 470 aa13.82□□□□□ -0.2
ZNF548-209ENST00000598895 JAKMIP3Q5VZ66 844 aa13.82□□□□□ -0.2
ZNF548-209ENST00000598895 DHX37Q8IY37 1157 aaKnown RBP13.82□□□□□ -0.2
ZNF548-209ENST00000598895 ZNF713Q8N859 430 aaPredicted RBP13.82□□□□□ -0.2
ZNF548-209ENST00000598895 NECAB1Q8N987 351 aa13.82□□□□□ -0.2
ZNF548-209ENST00000598895 AFG1LQ8WV93 481 aa13.82□□□□□ -0.2
ZNF548-209ENST00000598895 VPS54Q9P1Q0 977 aa13.82□□□□□ -0.2
ZNF548-209ENST00000598895 COLQQ9Y215 455 aaPredicted RBP13.82□□□□□ -0.2
ZNF548-209ENST00000598895 A0A0U1RQG5 324 aaPredicted RBP13.81□□□□□ -0.2
ZNF548-209ENST00000598895 GGPS1O95749 300 aa13.81□□□□□ -0.2
ZNF548-209ENST00000598895 HSP90AA1P07900 732 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms