RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 CCDC82Q8N4S0 544 aa16.87■□□□□ 0.29
XRCC1-208ENST00000598422 AFG1LQ8WV93 481 aa16.87■□□□□ 0.29
XRCC1-208ENST00000598422 RNPC3Q96LT9 517 aaKnown RBP16.87■□□□□ 0.29
XRCC1-208ENST00000598422 JAKMIP1Q96N16 626 aaKnown RBP16.87■□□□□ 0.29
XRCC1-208ENST00000598422 HIPK3Q9H422 1215 aa16.87■□□□□ 0.29
XRCC1-208ENST00000598422 RBM28Q9NW13 759 aaKnown RBP16.87■□□□□ 0.29
XRCC1-208ENST00000598422 PPP4R2Q9NY27 417 aa16.87■□□□□ 0.29
XRCC1-208ENST00000598422 EXOSC10Q01780 885 aaKnown RBP16.86■□□□□ 0.29
XRCC1-208ENST00000598422 ARHGAP1Q07960 439 aa16.86■□□□□ 0.29
XRCC1-208ENST00000598422 PPIGQ13427 754 aaKnown RBP eCLIP16.86■□□□□ 0.29
XRCC1-208ENST00000598422 GNPTABQ3T906 1256 aa16.86■□□□□ 0.29
XRCC1-208ENST00000598422 C9orf50Q5SZB4 431 aa16.86■□□□□ 0.29
XRCC1-208ENST00000598422 KCNV1Q6PIU1 500 aa16.86■□□□□ 0.29
XRCC1-208ENST00000598422 HEATR3Q7Z4Q2 680 aa16.86■□□□□ 0.29
XRCC1-208ENST00000598422 TMEM199Q8N511 208 aa16.86■□□□□ 0.29
XRCC1-208ENST00000598422 IL31RAQ8NI17 732 aa16.86■□□□□ 0.29
XRCC1-208ENST00000598422 ALDH8A1Q9H2A2 487 aaPredicted RBP16.86■□□□□ 0.29
XRCC1-208ENST00000598422 DDX41Q9UJV9 622 aaKnown RBP16.86■□□□□ 0.29
XRCC1-208ENST00000598422 GRIN2DO15399 1336 aa16.86■□□□□ 0.29
XRCC1-208ENST00000598422 KLF18A0A0U1RQI7 1052 aa16.85■□□□□ 0.29
XRCC1-208ENST00000598422 GOLGA8AA7E2F4 631 aa16.85■□□□□ 0.29
XRCC1-208ENST00000598422 GOLGA8BA8MQT2 603 aa16.85■□□□□ 0.29
XRCC1-208ENST00000598422 B4GALT4O60513 344 aa16.85■□□□□ 0.29
XRCC1-208ENST00000598422 CD4P01730 458 aa16.85■□□□□ 0.29
XRCC1-208ENST00000598422 MMP3P08254 477 aa16.85■□□□□ 0.29
XRCC1-208ENST00000598422 SUPT20HL2P0C7V6 817 aa16.85■□□□□ 0.29
XRCC1-208ENST00000598422 HSPA4P34932 840 aa16.85■□□□□ 0.29
XRCC1-208ENST00000598422 LAMC2Q13753 1193 aa16.85■□□□□ 0.29
XRCC1-208ENST00000598422 ERICH6BQ5W0A0 696 aa16.85■□□□□ 0.29
XRCC1-208ENST00000598422 MFSD5Q6N075 450 aa16.85■□□□□ 0.29
XRCC1-208ENST00000598422 GPR153Q6NV75 609 aa16.85■□□□□ 0.29
XRCC1-208ENST00000598422 BLOC1S2Q6QNY1 142 aa16.85■□□□□ 0.29
XRCC1-208ENST00000598422 VSIG10LQ86VR7 867 aa16.85■□□□□ 0.29
XRCC1-208ENST00000598422 DHX37Q8IY37 1157 aaKnown RBP16.85■□□□□ 0.29
XRCC1-208ENST00000598422 TRPV6Q9H1D0 765 aa16.85■□□□□ 0.29
XRCC1-208ENST00000598422 hCG_1642624A0A1W2PR95 340 aa16.84■□□□□ 0.29
XRCC1-208ENST00000598422 STAM2O75886 525 aa16.84■□□□□ 0.29
XRCC1-208ENST00000598422 CASTP20810 708 aaKnown RBP16.84■□□□□ 0.29
XRCC1-208ENST00000598422 PSMA5P28066 241 aa16.84■□□□□ 0.29
XRCC1-208ENST00000598422 DGKDQ16760 1214 aa16.84■□□□□ 0.29
XRCC1-208ENST00000598422 NBPF20Q3BBV1 942 aa16.84■□□□□ 0.29
XRCC1-208ENST00000598422 USP17L6PQ6QN14 398 aa16.84■□□□□ 0.29
XRCC1-208ENST00000598422 PSTPIP2Q9H939 334 aa16.84■□□□□ 0.29
XRCC1-208ENST00000598422 NOD1Q9Y239 953 aa16.84■□□□□ 0.29
XRCC1-208ENST00000598422 SNX14Q9Y5W7 946 aa16.84■□□□□ 0.29
XRCC1-208ENST00000598422 PIK3CDO00329 1044 aa16.83■□□□□ 0.28
XRCC1-208ENST00000598422 CYP2C18P33260 490 aa16.83■□□□□ 0.28
XRCC1-208ENST00000598422 RCAN1P53805 252 aa16.83■□□□□ 0.28
XRCC1-208ENST00000598422 EPHB4P54760 987 aa16.83■□□□□ 0.28
XRCC1-208ENST00000598422 LTBP2Q14767 1821 aa16.83■□□□□ 0.28
XRCC1-208ENST00000598422 FRMPD4Q14CM0 1322 aa16.83■□□□□ 0.28
XRCC1-208ENST00000598422 NFRKBQ6P4R8 1299 aa16.83■□□□□ 0.28
XRCC1-208ENST00000598422 DEFB123Q8N688 67 aa16.83■□□□□ 0.28
XRCC1-208ENST00000598422 PPTC7Q8NI37 304 aa16.83■□□□□ 0.28
XRCC1-208ENST00000598422 KCNB2Q92953 911 aa16.83■□□□□ 0.28
XRCC1-208ENST00000598422 EMID1Q96A84 441 aaPredicted RBP16.83■□□□□ 0.28
XRCC1-208ENST00000598422 SPATA33Q96N06 139 aa16.83■□□□□ 0.28
XRCC1-208ENST00000598422 TRMT13Q9NUP7 481 aaKnown RBP16.83■□□□□ 0.28
XRCC1-208ENST00000598422 BRPF3Q9ULD4 1205 aa16.83■□□□□ 0.28
XRCC1-208ENST00000598422 CNTNAP5Q8WYK1 1306 aa16.82■□□□□ 0.28
XRCC1-208ENST00000598422 CCDC196A0A1B0GTZ2 297 aa16.82■□□□□ 0.28
XRCC1-208ENST00000598422 SPDYE3A6NKU9 549 aa16.82■□□□□ 0.28
XRCC1-208ENST00000598422 SORBS3O60504 671 aa16.82■□□□□ 0.28
XRCC1-208ENST00000598422 GGPS1O95749 300 aa16.82■□□□□ 0.28
XRCC1-208ENST00000598422 TGFB3P10600 412 aa16.82■□□□□ 0.28
XRCC1-208ENST00000598422 CSF2RAP15509 400 aa16.82■□□□□ 0.28
XRCC1-208ENST00000598422 UBA1P22314 1058 aaKnown RBP16.82■□□□□ 0.28
XRCC1-208ENST00000598422 PSRC1Q6PGN9 363 aaPredicted RBP16.82■□□□□ 0.28
XRCC1-208ENST00000598422 Q6ZUG5 572 aa16.82■□□□□ 0.28
XRCC1-208ENST00000598422 GPKOWQ92917 476 aaPredicted RBP eCLIP16.82■□□□□ 0.28
XRCC1-208ENST00000598422 ZFP91Q96JP5 570 aaPredicted RBP16.82■□□□□ 0.28
XRCC1-208ENST00000598422 NOC4LQ9BVI4 516 aaKnown RBP16.82■□□□□ 0.28
XRCC1-208ENST00000598422 KATNAL1Q9BW62 490 aa16.82■□□□□ 0.28
XRCC1-208ENST00000598422 MLXIPQ9HAP2 919 aa16.82■□□□□ 0.28
XRCC1-208ENST00000598422 LAMA3Q16787 3333 aa16.82■□□□□ 0.28
XRCC1-208ENST00000598422 RGS20O76081 388 aa16.81■□□□□ 0.28
XRCC1-208ENST00000598422 CPA1P15085 419 aa16.81■□□□□ 0.28
XRCC1-208ENST00000598422 METAP2P50579 478 aaKnown RBP eCLIP16.81■□□□□ 0.28
XRCC1-208ENST00000598422 PTPN11Q06124 597 aaPredicted RBP16.81■□□□□ 0.28
XRCC1-208ENST00000598422 CELF3Q5SZQ8 465 aaKnown RBP16.81■□□□□ 0.28
XRCC1-208ENST00000598422 PPP1R18Q6NYC8 613 aa16.81■□□□□ 0.28
XRCC1-208ENST00000598422 XRRA1Q6P2D8 792 aa16.81■□□□□ 0.28
XRCC1-208ENST00000598422 BRF1Q92994 677 aa16.81■□□□□ 0.28
XRCC1-208ENST00000598422 MTIF3Q9H2K0 278 aaKnown RBP16.81■□□□□ 0.28
XRCC1-208ENST00000598422 EHMT1Q9H9B1 1298 aa16.81■□□□□ 0.28
XRCC1-208ENST00000598422 DNAH12Q6ZR08 3092 aa16.81■□□□□ 0.28
XRCC1-208ENST00000598422 NOP56O00567 594 aaKnown RBP16.8■□□□□ 0.28
XRCC1-208ENST00000598422 MEIS2O14770 477 aa16.8■□□□□ 0.28
XRCC1-208ENST00000598422 FIBPO43427 364 aa16.8■□□□□ 0.28
XRCC1-208ENST00000598422 EPB41L2O43491 1005 aaKnown RBP16.8■□□□□ 0.28
XRCC1-208ENST00000598422 ZNF286BP0CG31 522 aa16.8■□□□□ 0.28
XRCC1-208ENST00000598422 CYP2C9P11712 490 aa16.8■□□□□ 0.28
XRCC1-208ENST00000598422 RPS6KB1P23443 525 aa16.8■□□□□ 0.28
XRCC1-208ENST00000598422 NAPAP54920 295 aa16.8■□□□□ 0.28
XRCC1-208ENST00000598422 CCL23P55773 120 aa16.8■□□□□ 0.28
XRCC1-208ENST00000598422 APOBRQ0VD83 1088 aa16.8■□□□□ 0.28
XRCC1-208ENST00000598422 UBE2SQ16763 222 aa16.8■□□□□ 0.28
XRCC1-208ENST00000598422 PCNX4Q63HM2 1172 aa16.8■□□□□ 0.28
XRCC1-208ENST00000598422 WWC2Q6AWC2 1192 aa16.8■□□□□ 0.28
XRCC1-208ENST00000598422 Q7L0L9 218 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms