RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 MCTP2Q6DN12 878 aa19.12■□□□□ 0.65
SHKBP1-216ENST00000598201 MOXD1Q6UVY6 613 aa19.12■□□□□ 0.65
SHKBP1-216ENST00000598201 GIMAP8Q8ND71 665 aaPredicted RBP19.12■□□□□ 0.65
SHKBP1-216ENST00000598201 LENG9Q96B70 501 aa19.12■□□□□ 0.65
SHKBP1-216ENST00000598201 STK17AQ9UEE5 414 aa19.12■□□□□ 0.65
SHKBP1-216ENST00000598201 A0A1B0GTH6 734 aa19.11■□□□□ 0.65
SHKBP1-216ENST00000598201 FAM86B1E9PN63 330 aa19.11■□□□□ 0.65
SHKBP1-216ENST00000598201 PIK3CDO00329 1044 aa19.11■□□□□ 0.65
SHKBP1-216ENST00000598201 FAM86B2P0C5J1 330 aa19.11■□□□□ 0.65
SHKBP1-216ENST00000598201 INPP5BP32019 993 aa19.11■□□□□ 0.65
SHKBP1-216ENST00000598201 ASIC1P78348 528 aa19.11■□□□□ 0.65
SHKBP1-216ENST00000598201 DGKZQ13574 1117 aa19.11■□□□□ 0.65
SHKBP1-216ENST00000598201 NR1I3Q14994 352 aa19.11■□□□□ 0.65
SHKBP1-216ENST00000598201 PRR16Q569H4 304 aa19.11■□□□□ 0.65
SHKBP1-216ENST00000598201 NBPF12Q5TAG4 269 aaPredicted RBP19.11■□□□□ 0.65
SHKBP1-216ENST00000598201 SV2BQ7L1I2 683 aa19.11■□□□□ 0.65
SHKBP1-216ENST00000598201 CCDC150Q8NCX0 1101 aa19.11■□□□□ 0.65
SHKBP1-216ENST00000598201 CDK5RAP3Q96JB5 506 aa19.11■□□□□ 0.65
SHKBP1-216ENST00000598201 FEZ1Q99689 392 aa19.11■□□□□ 0.65
SHKBP1-216ENST00000598201 R3HCC1Q9Y3T6 440 aaKnown RBP19.11■□□□□ 0.65
SHKBP1-216ENST00000598201 ATAD5Q96QE3 1844 aa19.11■□□□□ 0.65
SHKBP1-216ENST00000598201 MYMKA6NI61 221 aa19.1■□□□□ 0.65
SHKBP1-216ENST00000598201 ADM5C9JUS6 153 aa19.1■□□□□ 0.65
SHKBP1-216ENST00000598201 PMS1P54277 932 aaKnown RBP19.1■□□□□ 0.65
SHKBP1-216ENST00000598201 FAM160B2Q86V87 743 aa19.1■□□□□ 0.65
SHKBP1-216ENST00000598201 FCHSD1Q86WN1 690 aa19.1■□□□□ 0.65
SHKBP1-216ENST00000598201 ETNPPLQ8TBG4 499 aa19.1■□□□□ 0.65
SHKBP1-216ENST00000598201 LARP4BQ92615 738 aaKnown RBP19.1■□□□□ 0.65
SHKBP1-216ENST00000598201 RAD54LQ92698 747 aa19.1■□□□□ 0.65
SHKBP1-216ENST00000598201 FEM1BQ9UK73 627 aa19.1■□□□□ 0.65
SHKBP1-216ENST00000598201 TRIM49BA6NDI0 452 aa19.1■□□□□ 0.65
SHKBP1-216ENST00000598201 SFPQP23246 707 aaKnown RBP eCLIP19.1■□□□□ 0.65
SHKBP1-216ENST00000598201 STAT3P40763 770 aa19.1■□□□□ 0.65
SHKBP1-216ENST00000598201 AMPD3Q01432 767 aa19.1■□□□□ 0.65
SHKBP1-216ENST00000598201 GOLGA8FQ08AF8 430 aa19.1■□□□□ 0.65
SHKBP1-216ENST00000598201 GOLGA8DPQ0D2H9 430 aa19.1■□□□□ 0.65
SHKBP1-216ENST00000598201 DLK2Q6UY11 383 aa19.1■□□□□ 0.65
SHKBP1-216ENST00000598201 TEX33O43247 280 aa19.09■□□□□ 0.65
SHKBP1-216ENST00000598201 CFBP00751 764 aa19.09■□□□□ 0.65
SHKBP1-216ENST00000598201 PDE4DQ08499 809 aa19.09■□□□□ 0.65
SHKBP1-216ENST00000598201 STK4Q13043 487 aa19.09■□□□□ 0.65
SHKBP1-216ENST00000598201 TPD52L1Q16890 204 aaPredicted RBP19.09■□□□□ 0.65
SHKBP1-216ENST00000598201 Q4G0T1 1027 aa19.09■□□□□ 0.65
SHKBP1-216ENST00000598201 DNTTIP2Q5QJE6 756 aaKnown RBP19.09■□□□□ 0.65
SHKBP1-216ENST00000598201 PRAMEF18Q5VWM3 479 aa19.09■□□□□ 0.65
SHKBP1-216ENST00000598201 SMC1BQ8NDV3 1235 aa19.09■□□□□ 0.65
SHKBP1-216ENST00000598201 CYP2W1Q8TAV3 490 aa19.09■□□□□ 0.65
SHKBP1-216ENST00000598201 RBM46Q8TBY0 533 aaKnown RBP19.09■□□□□ 0.65
SHKBP1-216ENST00000598201 PPP2R3BQ9Y5P8 575 aa19.09■□□□□ 0.65
SHKBP1-216ENST00000598201 CTNND1O60716 968 aaKnown RBP19.09■□□□□ 0.65
SHKBP1-216ENST00000598201 FCER1AP12319 257 aa19.09■□□□□ 0.65
SHKBP1-216ENST00000598201 TBX2Q13207 712 aaPredicted RBP19.09■□□□□ 0.65
SHKBP1-216ENST00000598201 SEMA3FQ13275 785 aa19.09■□□□□ 0.65
SHKBP1-216ENST00000598201 HPS3Q969F9 1004 aa19.09■□□□□ 0.65
SHKBP1-216ENST00000598201 EXOC1Q9NV70 894 aa19.09■□□□□ 0.65
SHKBP1-216ENST00000598201 ADD3Q9UEY8 706 aaKnown RBP19.09■□□□□ 0.65
SHKBP1-216ENST00000598201 USP27XA6NNY8 438 aa19.08■□□□□ 0.64
SHKBP1-216ENST00000598201 CIITAP33076 1130 aa19.08■□□□□ 0.64
SHKBP1-216ENST00000598201 CCT6AP40227 531 aaKnown RBP19.08■□□□□ 0.64
SHKBP1-216ENST00000598201 SPIRE1Q08AE8 756 aa19.08■□□□□ 0.64
SHKBP1-216ENST00000598201 ITGBL1O95965 494 aaPredicted RBP19.07■□□□□ 0.64
SHKBP1-216ENST00000598201 TRAF1Q13077 416 aa19.07■□□□□ 0.64
SHKBP1-216ENST00000598201 HYIQ5T013 277 aa19.07■□□□□ 0.64
SHKBP1-216ENST00000598201 DYMQ7RTS9 669 aa19.07■□□□□ 0.64
SHKBP1-216ENST00000598201 SLFN12Q8IYM2 578 aa19.07■□□□□ 0.64
SHKBP1-216ENST00000598201 KIAA1683Q9H0B3 1180 aa19.07■□□□□ 0.64
SHKBP1-216ENST00000598201 TRAF5O00463 557 aa19.07■□□□□ 0.64
SHKBP1-216ENST00000598201 CYP3A4P08684 503 aa19.07■□□□□ 0.64
SHKBP1-216ENST00000598201 SPECC1LQ69YQ0 1117 aa19.07■□□□□ 0.64
SHKBP1-216ENST00000598201 IRF2BP1Q8IU81 584 aa19.07■□□□□ 0.64
SHKBP1-216ENST00000598201 AGBL1Q96MI9 1066 aa19.07■□□□□ 0.64
SHKBP1-216ENST00000598201 FZD1Q9UP38 647 aa19.07■□□□□ 0.64
SHKBP1-216ENST00000598201 ZNF536O15090 1300 aa19.06■□□□□ 0.64
SHKBP1-216ENST00000598201 GCOM1H8Y6P7 765 aaPredicted RBP19.06■□□□□ 0.64
SHKBP1-216ENST00000598201 MSH4O15457 936 aa19.06■□□□□ 0.64
SHKBP1-216ENST00000598201 POLR2MP0CAP2 368 aa19.06■□□□□ 0.64
SHKBP1-216ENST00000598201 KRT31Q15323 416 aa19.06■□□□□ 0.64
SHKBP1-216ENST00000598201 GLIPR1L2Q4G1C9 344 aa19.06■□□□□ 0.64
SHKBP1-216ENST00000598201 KIAA0895Q8NCT3 520 aa19.06■□□□□ 0.64
SHKBP1-216ENST00000598201 LIMA1Q9UHB6 759 aaKnown RBP19.06■□□□□ 0.64
SHKBP1-216ENST00000598201 MRPL11Q9Y3B7 192 aaKnown RBP19.06■□□□□ 0.64
SHKBP1-216ENST00000598201 POTEB3A0JP26 581 aa19.05■□□□□ 0.64
SHKBP1-216ENST00000598201 PSMA7O14818 248 aa19.05■□□□□ 0.64
SHKBP1-216ENST00000598201 TBX3O15119 743 aa19.05■□□□□ 0.64
SHKBP1-216ENST00000598201 WDR46O15213 610 aaKnown RBP19.05■□□□□ 0.64
SHKBP1-216ENST00000598201 MED24O75448 989 aa19.05■□□□□ 0.64
SHKBP1-216ENST00000598201 PBX1P40424 430 aa19.05■□□□□ 0.64
SHKBP1-216ENST00000598201 TTI2Q6NXR4 508 aa19.05■□□□□ 0.64
SHKBP1-216ENST00000598201 POTEBQ6S5H4 581 aa19.05■□□□□ 0.64
SHKBP1-216ENST00000598201 DDX12PQ92771 950 aa19.05■□□□□ 0.64
SHKBP1-216ENST00000598201 CCDC47Q96A33 483 aaKnown RBP19.05■□□□□ 0.64
SHKBP1-216ENST00000598201 CDCA5Q96FF9 252 aa19.05■□□□□ 0.64
SHKBP1-216ENST00000598201 KIAA1024Q9UPX6 916 aa19.05■□□□□ 0.64
SHKBP1-216ENST00000598201 IGLV3-22A0A075B6J6 115 aa19.05■□□□□ 0.64
SHKBP1-216ENST00000598201 LRRC10BA6NIK2 292 aa19.05■□□□□ 0.64
SHKBP1-216ENST00000598201 E9PMD0 336 aa19.05■□□□□ 0.64
SHKBP1-216ENST00000598201 UBXN2AP68543 259 aa19.05■□□□□ 0.64
SHKBP1-216ENST00000598201 STIM1Q13586 685 aa19.05■□□□□ 0.64
SHKBP1-216ENST00000598201 TCP11X2Q5H9J9 407 aa19.05■□□□□ 0.64
SHKBP1-216ENST00000598201 UNC13DQ70J99 1090 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms