RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 ARMC5Q96C12 935 aa25.24■■□□□ 1.63
CHMP2A-204ENST00000597848 HMX1Q9NP08 348 aaPredicted RBP25.24■■□□□ 1.63
CHMP2A-204ENST00000597848 VTA1Q9NP79 307 aa25.24■■□□□ 1.63
CHMP2A-204ENST00000597848 RTEL1Q9NZ71 1219 aa25.24■■□□□ 1.63
CHMP2A-204ENST00000597848 ZNF865P0CJ78 1059 aaPredicted RBP25.23■■□□□ 1.63
CHMP2A-204ENST00000597848 CCND3P30281 292 aaPredicted RBP25.23■■□□□ 1.63
CHMP2A-204ENST00000597848 ZNF76P36508 570 aa25.23■■□□□ 1.63
CHMP2A-204ENST00000597848 SEPT14Q6ZU15 432 aa25.23■■□□□ 1.63
CHMP2A-204ENST00000597848 PIK3AP1Q6ZUJ8 805 aa25.23■■□□□ 1.63
CHMP2A-204ENST00000597848 TSHZ2Q9NRE2 1034 aa25.23■■□□□ 1.63
CHMP2A-204ENST00000597848 VPS37CA5D8V6 355 aaPredicted RBP25.22■■□□□ 1.63
CHMP2A-204ENST00000597848 MRPS9P82933 396 aaKnown RBP25.22■■□□□ 1.63
CHMP2A-204ENST00000597848 TBCKQ8TEA7 893 aa25.22■■□□□ 1.63
CHMP2A-204ENST00000597848 ZNF333Q96JL9 665 aa25.22■■□□□ 1.63
CHMP2A-204ENST00000597848 KATNBL1Q9H079 304 aa25.22■■□□□ 1.63
CHMP2A-204ENST00000597848 UNC93B1Q9H1C4 597 aa25.22■■□□□ 1.63
CHMP2A-204ENST00000597848 PDGFCQ9NRA1 345 aa25.22■■□□□ 1.63
CHMP2A-204ENST00000597848 DAXXQ9UER7 740 aaPredicted RBP25.22■■□□□ 1.63
CHMP2A-204ENST00000597848 STAM2O75886 525 aa25.21■■□□□ 1.63
CHMP2A-204ENST00000597848 CCL5P13501 91 aa25.21■■□□□ 1.63
CHMP2A-204ENST00000597848 MTFR1Q15390 333 aa25.21■■□□□ 1.63
CHMP2A-204ENST00000597848 INF2Q27J81 1249 aa25.21■■□□□ 1.63
CHMP2A-204ENST00000597848 RNF208Q9H0X6 261 aa25.21■■□□□ 1.63
CHMP2A-204ENST00000597848 FOXP1Q9H334 677 aaPredicted RBP25.21■■□□□ 1.63
CHMP2A-204ENST00000597848 FAM184BQ9ULE4 1060 aa25.21■■□□□ 1.63
CHMP2A-204ENST00000597848 SYT1P21579 422 aa25.2■■□□□ 1.62
CHMP2A-204ENST00000597848 CCDC144BQ3MJ40 725 aa25.2■■□□□ 1.62
CHMP2A-204ENST00000597848 TAPT1Q6NXT6 567 aa25.2■■□□□ 1.62
CHMP2A-204ENST00000597848 TNFRSF25Q93038 417 aa25.2■■□□□ 1.62
CHMP2A-204ENST00000597848 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.2■■□□□ 1.62
CHMP2A-204ENST00000597848 CYP3A4P08684 503 aa25.19■■□□□ 1.62
CHMP2A-204ENST00000597848 ADCYAP1R1P41586 468 aa25.19■■□□□ 1.62
CHMP2A-204ENST00000597848 GNPTABQ3T906 1256 aa25.19■■□□□ 1.62
CHMP2A-204ENST00000597848 EARS2Q5JPH6 523 aaKnown RBP25.19■■□□□ 1.62
CHMP2A-204ENST00000597848 NLRX1Q86UT6 975 aa25.19■■□□□ 1.62
CHMP2A-204ENST00000597848 SCFD2Q8WU76 684 aa25.19■■□□□ 1.62
CHMP2A-204ENST00000597848 RBM19Q9Y4C8 960 aaKnown RBP25.19■■□□□ 1.62
CHMP2A-204ENST00000597848 MCM3APO60318 1980 aa25.18■■□□□ 1.62
CHMP2A-204ENST00000597848 FAM205CA6NFA0 338 aa25.18■■□□□ 1.62
CHMP2A-204ENST00000597848 SEPT4O43236 478 aa25.18■■□□□ 1.62
CHMP2A-204ENST00000597848 AKR1A1P14550 325 aa25.18■■□□□ 1.62
CHMP2A-204ENST00000597848 USP11P51784 963 aa25.18■■□□□ 1.62
CHMP2A-204ENST00000597848 IQSEC1Q6DN90 963 aa25.18■■□□□ 1.62
CHMP2A-204ENST00000597848 CRYGNQ8WXF5 182 aa25.18■■□□□ 1.62
CHMP2A-204ENST00000597848 MXRA8Q9BRK3 442 aa25.18■■□□□ 1.62
CHMP2A-204ENST00000597848 WDR11Q9BZH6 1224 aa25.18■■□□□ 1.62
CHMP2A-204ENST00000597848 UBIAD1Q9Y5Z9 338 aa25.18■■□□□ 1.62
CHMP2A-204ENST00000597848 KIF28PB7ZC32 967 aa25.17■■□□□ 1.62
CHMP2A-204ENST00000597848 RGS20O76081 388 aa25.17■■□□□ 1.62
CHMP2A-204ENST00000597848 ITGB5P18084 799 aa25.17■■□□□ 1.62
CHMP2A-204ENST00000597848 TNFAIP2Q03169 654 aa25.17■■□□□ 1.62
CHMP2A-204ENST00000597848 TTLL4Q14679 1199 aa25.17■■□□□ 1.62
CHMP2A-204ENST00000597848 CEP55Q53EZ4 464 aa25.17■■□□□ 1.62
CHMP2A-204ENST00000597848 ANO1Q5XXA6 986 aa25.17■■□□□ 1.62
CHMP2A-204ENST00000597848 NEK8Q86SG6 692 aa25.17■■□□□ 1.62
CHMP2A-204ENST00000597848 NOSTRINQ8IVI9 506 aa25.17■■□□□ 1.62
CHMP2A-204ENST00000597848 TNS4Q8IZW8 715 aa25.17■■□□□ 1.62
CHMP2A-204ENST00000597848 INPP4AQ96PE3 977 aaPredicted RBP25.17■■□□□ 1.62
CHMP2A-204ENST00000597848 MRVI1Q9Y6F6 885 aa25.17■■□□□ 1.62
CHMP2A-204ENST00000597848 RBM47A0AV96 593 aaKnown RBP25.16■■□□□ 1.62
CHMP2A-204ENST00000597848 STX6O43752 255 aa25.16■■□□□ 1.62
CHMP2A-204ENST00000597848 TXNP10599 105 aaKnown RBP25.16■■□□□ 1.62
CHMP2A-204ENST00000597848 U2AF2P26368 475 aaKnown RBP eCLIP25.16■■□□□ 1.62
CHMP2A-204ENST00000597848 LETM2Q2VYF4 491 aa25.16■■□□□ 1.62
CHMP2A-204ENST00000597848 CYP2W1Q8TAV3 490 aa25.16■■□□□ 1.62
CHMP2A-204ENST00000597848 TMEM106CQ9BVX2 250 aa25.16■■□□□ 1.62
CHMP2A-204ENST00000597848 JADE2Q9NQC1 790 aa25.16■■□□□ 1.62
CHMP2A-204ENST00000597848 DDX20Q9UHI6 824 aaKnown RBP25.16■■□□□ 1.62
CHMP2A-204ENST00000597848 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.15■■□□□ 1.62
CHMP2A-204ENST00000597848 SMPD1P17405 629 aa25.15■■□□□ 1.62
CHMP2A-204ENST00000597848 ATP2B1P20020 1258 aa25.15■■□□□ 1.62
CHMP2A-204ENST00000597848 KCNV1Q6PIU1 500 aa25.15■■□□□ 1.62
CHMP2A-204ENST00000597848 GPRASP2Q96D09 838 aa25.15■■□□□ 1.62
CHMP2A-204ENST00000597848 DEFB118Q96PH6 123 aa25.15■■□□□ 1.62
CHMP2A-204ENST00000597848 SPATA31C2B4DYI2 1134 aa25.14■■□□□ 1.62
CHMP2A-204ENST00000597848 FAM86B1E9PN63 330 aa25.14■■□□□ 1.62
CHMP2A-204ENST00000597848 FIBPO43427 364 aa25.14■■□□□ 1.62
CHMP2A-204ENST00000597848 MSCO60682 206 aa25.14■■□□□ 1.62
CHMP2A-204ENST00000597848 FAM86B2P0C5J1 330 aa25.14■■□□□ 1.62
CHMP2A-204ENST00000597848 RARBP10826 455 aa25.14■■□□□ 1.62
CHMP2A-204ENST00000597848 CIITAP33076 1130 aa25.14■■□□□ 1.62
CHMP2A-204ENST00000597848 MTMR1Q13613 665 aa25.14■■□□□ 1.62
CHMP2A-204ENST00000597848 LY6KQ17RY6 165 aa25.14■■□□□ 1.62
CHMP2A-204ENST00000597848 PRR16Q569H4 304 aa25.14■■□□□ 1.62
CHMP2A-204ENST00000597848 FERMT3Q86UX7 667 aa25.14■■□□□ 1.62
CHMP2A-204ENST00000597848 PLA2G4DQ86XP0 818 aa25.14■■□□□ 1.62
CHMP2A-204ENST00000597848 LENG1Q96BZ8 264 aaPredicted RBP25.14■■□□□ 1.62
CHMP2A-204ENST00000597848 CDHR1Q96JP9 859 aa25.14■■□□□ 1.62
CHMP2A-204ENST00000597848 PAK6Q9NQU5 681 aaPredicted RBP25.14■■□□□ 1.62
CHMP2A-204ENST00000597848 MEIS1O00470 390 aa25.13■■□□□ 1.61
CHMP2A-204ENST00000597848 EDIL3O43854 480 aa25.13■■□□□ 1.61
CHMP2A-204ENST00000597848 ARIH2O95376 493 aa25.13■■□□□ 1.61
CHMP2A-204ENST00000597848 ICAM3P32942 547 aa25.13■■□□□ 1.61
CHMP2A-204ENST00000597848 DUSP28Q4G0W2 176 aa25.13■■□□□ 1.61
CHMP2A-204ENST00000597848 TMEM63BQ5T3F8 832 aa25.13■■□□□ 1.61
CHMP2A-204ENST00000597848 CCDC62Q6P9F0 684 aa25.13■■□□□ 1.61
CHMP2A-204ENST00000597848 ABHD8Q96I13 439 aa25.13■■□□□ 1.61
CHMP2A-204ENST00000597848 NAP1L4Q99733 375 aaKnown RBP25.13■■□□□ 1.61
CHMP2A-204ENST00000597848 PKD2L1Q9P0L9 805 aa25.13■■□□□ 1.61
CHMP2A-204ENST00000597848 DDX41Q9UJV9 622 aaKnown RBP25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms