RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 CCDC144BQ3MJ40 725 aa9.55□□□□□ -0.88
VRK3-211ENST00000596445 IQSEC1Q6DN90 963 aa9.55□□□□□ -0.88
VRK3-211ENST00000596445 TAPT1Q6NXT6 567 aa9.55□□□□□ -0.88
VRK3-211ENST00000596445 EEPD1Q7L9B9 569 aa9.55□□□□□ -0.88
VRK3-211ENST00000596445 FBXO16Q8IX29 292 aaPredicted RBP9.55□□□□□ -0.88
VRK3-211ENST00000596445 RASGRP4Q8TDF6 673 aa9.55□□□□□ -0.88
VRK3-211ENST00000596445 CRYGNQ8WXF5 182 aa9.55□□□□□ -0.88
VRK3-211ENST00000596445 ABHD8Q96I13 439 aa9.55□□□□□ -0.88
VRK3-211ENST00000596445 PGBD1Q96JS3 809 aa9.55□□□□□ -0.88
VRK3-211ENST00000596445 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.55□□□□□ -0.88
VRK3-211ENST00000596445 PAK6Q9NQU5 681 aaPredicted RBP9.55□□□□□ -0.88
VRK3-211ENST00000596445 ZHX1Q9UKY1 873 aaPredicted RBP9.55□□□□□ -0.88
VRK3-211ENST00000596445 FAM184BQ9ULE4 1060 aa9.55□□□□□ -0.88
VRK3-211ENST00000596445 RBM47A0AV96 593 aaKnown RBP9.54□□□□□ -0.88
VRK3-211ENST00000596445 MSCO60682 206 aa9.54□□□□□ -0.88
VRK3-211ENST00000596445 HSP90AA1P07900 732 aaKnown RBP9.54□□□□□ -0.88
VRK3-211ENST00000596445 GJB1P08034 283 aa9.54□□□□□ -0.88
VRK3-211ENST00000596445 CYP3A4P08684 503 aa9.54□□□□□ -0.88
VRK3-211ENST00000596445 AKR1A1P14550 325 aa9.54□□□□□ -0.88
VRK3-211ENST00000596445 ARHGAP4P98171 946 aa9.54□□□□□ -0.88
VRK3-211ENST00000596445 GUCY1B3Q02153 619 aa9.54□□□□□ -0.88
VRK3-211ENST00000596445 BECN1Q14457 450 aa9.54□□□□□ -0.88
VRK3-211ENST00000596445 GNPTABQ3T906 1256 aa9.54□□□□□ -0.88
VRK3-211ENST00000596445 KRT25Q7Z3Z0 450 aa9.54□□□□□ -0.88
VRK3-211ENST00000596445 DIS3L2Q8IYB7 885 aaKnown RBP9.54□□□□□ -0.88
VRK3-211ENST00000596445 OXER1Q8TDS5 423 aa9.54□□□□□ -0.88
VRK3-211ENST00000596445 SCFD2Q8WU76 684 aa9.54□□□□□ -0.88
VRK3-211ENST00000596445 TMEM106CQ9BVX2 250 aa9.54□□□□□ -0.88
VRK3-211ENST00000596445 PDGFCQ9NRA1 345 aa9.54□□□□□ -0.88
VRK3-211ENST00000596445 DDX20Q9UHI6 824 aaKnown RBP9.54□□□□□ -0.88
VRK3-211ENST00000596445 CCDC194A0A1B0GVG4 234 aa9.53□□□□□ -0.88
VRK3-211ENST00000596445 BTBD18B2RXH4 712 aa9.53□□□□□ -0.88
VRK3-211ENST00000596445 H3BQV1 296 aa9.53□□□□□ -0.88
VRK3-211ENST00000596445 DUSP11O75319 330 aaKnown RBP9.53□□□□□ -0.88
VRK3-211ENST00000596445 RGS20O76081 388 aa9.53□□□□□ -0.88
VRK3-211ENST00000596445 TGFB3P10600 412 aa9.53□□□□□ -0.88
VRK3-211ENST00000596445 RARBP10826 455 aa9.53□□□□□ -0.88
VRK3-211ENST00000596445 CAPN2P17655 700 aa9.53□□□□□ -0.88
VRK3-211ENST00000596445 PDCP20941 246 aa9.53□□□□□ -0.88
VRK3-211ENST00000596445 ADCYAP1R1P41586 468 aa9.53□□□□□ -0.88
VRK3-211ENST00000596445 USP11P51784 963 aa9.53□□□□□ -0.88
VRK3-211ENST00000596445 TNFAIP2Q03169 654 aa9.53□□□□□ -0.88
VRK3-211ENST00000596445 NR5A1Q13285 461 aa9.53□□□□□ -0.88
VRK3-211ENST00000596445 TTLL4Q14679 1199 aa9.53□□□□□ -0.88
VRK3-211ENST00000596445 NONOQ15233 471 aaKnown RBP eCLIP9.53□□□□□ -0.88
VRK3-211ENST00000596445 DUSP28Q4G0W2 176 aa9.53□□□□□ -0.88
VRK3-211ENST00000596445 IFFO2Q5TF58 517 aa9.53□□□□□ -0.88
VRK3-211ENST00000596445 LARP1BQ659C4 914 aaKnown RBP9.53□□□□□ -0.88
VRK3-211ENST00000596445 KCNV1Q6PIU1 500 aa9.53□□□□□ -0.88
VRK3-211ENST00000596445 SEPT14Q6ZU15 432 aa9.53□□□□□ -0.88
VRK3-211ENST00000596445 TBCKQ8TEA7 893 aa9.53□□□□□ -0.88
VRK3-211ENST00000596445 TNFRSF25Q93038 417 aa9.53□□□□□ -0.88
VRK3-211ENST00000596445 INPP4AQ96PE3 977 aaPredicted RBP9.53□□□□□ -0.88
VRK3-211ENST00000596445 DEFB118Q96PH6 123 aa9.53□□□□□ -0.88
VRK3-211ENST00000596445 WDR11Q9BZH6 1224 aa9.53□□□□□ -0.88
VRK3-211ENST00000596445 FOXP1Q9H334 677 aaPredicted RBP9.53□□□□□ -0.88
VRK3-211ENST00000596445 UBIAD1Q9Y5Z9 338 aa9.53□□□□□ -0.88
VRK3-211ENST00000596445 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.52□□□□□ -0.89
VRK3-211ENST00000596445 SPATA31C2B4DYI2 1134 aa9.52□□□□□ -0.89
VRK3-211ENST00000596445 MEIS1O00470 390 aa9.52□□□□□ -0.89
VRK3-211ENST00000596445 NKRFO15226 690 aaKnown RBP eCLIP9.52□□□□□ -0.89
VRK3-211ENST00000596445 MAFGO15525 162 aa9.52□□□□□ -0.89
VRK3-211ENST00000596445 ADCY6O43306 1168 aa9.52□□□□□ -0.89
VRK3-211ENST00000596445 FIBPO43427 364 aa9.52□□□□□ -0.89
VRK3-211ENST00000596445 SGPL1O95470 568 aa9.52□□□□□ -0.89
VRK3-211ENST00000596445 SMPD1P17405 629 aa9.52□□□□□ -0.89
VRK3-211ENST00000596445 ITGB5P18084 799 aa9.52□□□□□ -0.89
VRK3-211ENST00000596445 U2AF2P26368 475 aaKnown RBP eCLIP9.52□□□□□ -0.89
VRK3-211ENST00000596445 ICAM3P32942 547 aa9.52□□□□□ -0.89
VRK3-211ENST00000596445 CIITAP33076 1130 aa9.52□□□□□ -0.89
VRK3-211ENST00000596445 ZNF76P36508 570 aa9.52□□□□□ -0.89
VRK3-211ENST00000596445 GJA8P48165 433 aa9.52□□□□□ -0.89
VRK3-211ENST00000596445 CEP55Q53EZ4 464 aa9.52□□□□□ -0.89
VRK3-211ENST00000596445 ANO1Q5XXA6 986 aa9.52□□□□□ -0.89
VRK3-211ENST00000596445 LHX8Q68G74 356 aa9.52□□□□□ -0.89
VRK3-211ENST00000596445 CCDC62Q6P9F0 684 aa9.52□□□□□ -0.89
VRK3-211ENST00000596445 PIK3AP1Q6ZUJ8 805 aa9.52□□□□□ -0.89
VRK3-211ENST00000596445 NIPA1Q7RTP0 329 aa9.52□□□□□ -0.89
VRK3-211ENST00000596445 NLRX1Q86UT6 975 aa9.52□□□□□ -0.89
VRK3-211ENST00000596445 U2AF1L4Q8WU68 220 aaKnown RBP9.52□□□□□ -0.89
VRK3-211ENST00000596445 GPRASP2Q96D09 838 aa9.52□□□□□ -0.89
VRK3-211ENST00000596445 ZFP91Q96JP5 570 aaPredicted RBP9.52□□□□□ -0.89
VRK3-211ENST00000596445 CDHR1Q96JP9 859 aa9.52□□□□□ -0.89
VRK3-211ENST00000596445 MXRA8Q9BRK3 442 aa9.52□□□□□ -0.89
VRK3-211ENST00000596445 CRISPLD2Q9H0B8 497 aa9.52□□□□□ -0.89
VRK3-211ENST00000596445 DOCK5Q9H7D0 1870 aa9.52□□□□□ -0.89
VRK3-211ENST00000596445 JADE2Q9NQC1 790 aa9.52□□□□□ -0.89
VRK3-211ENST00000596445 FOXD4L1Q9NU39 408 aa9.52□□□□□ -0.89
VRK3-211ENST00000596445 RTEL1Q9NZ71 1219 aa9.52□□□□□ -0.89
VRK3-211ENST00000596445 GNEQ9Y223 722 aaKnown RBP9.52□□□□□ -0.89
VRK3-211ENST00000596445 MRVI1Q9Y6F6 885 aa9.52□□□□□ -0.89
VRK3-211ENST00000596445 IGLV3-22A0A075B6J6 115 aa9.51□□□□□ -0.89
VRK3-211ENST00000596445 CYP3A7-CYP3A51PA0A087WV96 503 aa9.51□□□□□ -0.89
VRK3-211ENST00000596445 CCDC85CA6NKD9 419 aa9.51□□□□□ -0.89
VRK3-211ENST00000596445 FAM86B1E9PN63 330 aa9.51□□□□□ -0.89
VRK3-211ENST00000596445 EDIL3O43854 480 aa9.51□□□□□ -0.89
VRK3-211ENST00000596445 ARIH2O95376 493 aa9.51□□□□□ -0.89
VRK3-211ENST00000596445 FAM86B2P0C5J1 330 aa9.51□□□□□ -0.89
VRK3-211ENST00000596445 TXNP10599 105 aaKnown RBP9.51□□□□□ -0.89
VRK3-211ENST00000596445 CYP3A7P24462 503 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms