RNA–Protein interactions for RNA: ENST00000595792.1

PNKP-206, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 645 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-206ENST00000595792 CCDC136Q96JN2 1154 aa20.7■□□□□ 0.9
PNKP-206ENST00000595792 PIGSQ96S52 555 aa20.7■□□□□ 0.9
PNKP-206ENST00000595792 SEZ6LQ9BYH1 1024 aa20.7■□□□□ 0.9
PNKP-206ENST00000595792 ZNF576Q9H609 170 aa20.7■□□□□ 0.9
PNKP-206ENST00000595792 PXMP2Q9NR77 195 aa20.7■□□□□ 0.9
PNKP-206ENST00000595792 SH2B2O14492 632 aaPredicted RBP20.69■□□□□ 0.9
PNKP-206ENST00000595792 ZBTB5O15062 677 aa20.69■□□□□ 0.9
PNKP-206ENST00000595792 MMP3P08254 477 aa20.69■□□□□ 0.9
PNKP-206ENST00000595792 HOXA13P31271 388 aaPredicted RBP20.69■□□□□ 0.9
PNKP-206ENST00000595792 HSD17B4P51659 736 aa20.69■□□□□ 0.9
PNKP-206ENST00000595792 STXBP2Q15833 593 aa20.69■□□□□ 0.9
PNKP-206ENST00000595792 BRDTQ58F21 947 aaPredicted RBP20.69■□□□□ 0.9
PNKP-206ENST00000595792 ZNF654Q8IZM8 581 aa20.69■□□□□ 0.9
PNKP-206ENST00000595792 IL31RAQ8NI17 732 aa20.69■□□□□ 0.9
PNKP-206ENST00000595792 ZFP91Q96JP5 570 aaPredicted RBP20.69■□□□□ 0.9
PNKP-206ENST00000595792 LRRC2Q9BYS8 371 aa20.69■□□□□ 0.9
PNKP-206ENST00000595792 CHD9Q3L8U1 2897 aa20.69■□□□□ 0.9
PNKP-206ENST00000595792 TRIP12Q14669 1992 aaPredicted RBP20.68■□□□□ 0.9
PNKP-206ENST00000595792 SORBS3O60504 671 aa20.68■□□□□ 0.9
PNKP-206ENST00000595792 GH1P01241 217 aa20.68■□□□□ 0.9
PNKP-206ENST00000595792 GHRHRQ02643 423 aa20.68■□□□□ 0.9
PNKP-206ENST00000595792 SART3Q15020 963 aaKnown RBP20.68■□□□□ 0.9
PNKP-206ENST00000595792 DEFB128Q7Z7B8 93 aa20.68■□□□□ 0.9
PNKP-206ENST00000595792 RASEFQ8IZ41 740 aa20.68■□□□□ 0.9
PNKP-206ENST00000595792 PIBF1Q8WXW3 757 aa20.68■□□□□ 0.9
PNKP-206ENST00000595792 IWS1Q96ST2 819 aa20.68■□□□□ 0.9
PNKP-206ENST00000595792 YBX2Q9Y2T7 364 aaKnown RBP20.68■□□□□ 0.9
PNKP-206ENST00000595792 PCDHA1Q9Y5I3 950 aa20.68■□□□□ 0.9
PNKP-206ENST00000595792 CDC45O75419 566 aa20.67■□□□□ 0.9
PNKP-206ENST00000595792 NR3C2P08235 984 aa20.67■□□□□ 0.9
PNKP-206ENST00000595792 SUPT20HL2P0C7V6 817 aa20.67■□□□□ 0.9
PNKP-206ENST00000595792 MYCLP12524 364 aaPredicted RBP20.67■□□□□ 0.9
PNKP-206ENST00000595792 RABGGTBP53611 331 aa20.67■□□□□ 0.9
PNKP-206ENST00000595792 CATIPQ7Z7H3 387 aa20.67■□□□□ 0.9
PNKP-206ENST00000595792 USP38Q8NB14 1042 aa20.67■□□□□ 0.9
PNKP-206ENST00000595792 MAF1Q9H063 256 aa20.67■□□□□ 0.9
PNKP-206ENST00000595792 NKX2-4Q9H2Z4 354 aa20.67■□□□□ 0.9
PNKP-206ENST00000595792 VCANP13611 3396 aa20.66■□□□□ 0.9
PNKP-206ENST00000595792 ZBBXA8MT70 800 aa20.66■□□□□ 0.9
PNKP-206ENST00000595792 KPNA6O60684 536 aa20.66■□□□□ 0.9
PNKP-206ENST00000595792 RGS20O76081 388 aa20.66■□□□□ 0.9
PNKP-206ENST00000595792 RXRAP19793 462 aa20.66■□□□□ 0.9
PNKP-206ENST00000595792 MCM5P33992 734 aa20.66■□□□□ 0.9
PNKP-206ENST00000595792 NFRKBQ6P4R8 1299 aa20.66■□□□□ 0.9
PNKP-206ENST00000595792 RAB11FIP4Q86YS3 637 aa20.66■□□□□ 0.9
PNKP-206ENST00000595792 KAT2BQ92831 832 aa20.66■□□□□ 0.9
PNKP-206ENST00000595792 PDCD2LQ9BRP1 358 aa20.66■□□□□ 0.9
PNKP-206ENST00000595792 MTA3Q9BTC8 594 aa20.66■□□□□ 0.9
PNKP-206ENST00000595792 PRDM12Q9H4Q4 367 aa20.66■□□□□ 0.9
PNKP-206ENST00000595792 DDX41Q9UJV9 622 aaKnown RBP20.66■□□□□ 0.9
PNKP-206ENST00000595792 MRVI1Q9Y6F6 885 aa20.66■□□□□ 0.9
PNKP-206ENST00000595792 EIF3JO75822 258 aaKnown RBP20.65■□□□□ 0.9
PNKP-206ENST00000595792 PLEKHA8P1O95397 391 aa20.65■□□□□ 0.9
PNKP-206ENST00000595792 MYOGP15173 224 aa20.65■□□□□ 0.9
PNKP-206ENST00000595792 ADCK5Q3MIX3 580 aa20.65■□□□□ 0.9
PNKP-206ENST00000595792 GDF6Q6KF10 455 aaPredicted RBP20.65■□□□□ 0.9
PNKP-206ENST00000595792 CASC1Q6TDU7 716 aa20.65■□□□□ 0.9
PNKP-206ENST00000595792 TMEM87BQ96K49 555 aa20.65■□□□□ 0.9
PNKP-206ENST00000595792 CTAGE1Q96RT6 745 aa20.65■□□□□ 0.9
PNKP-206ENST00000595792 COL25A1Q9BXS0 654 aaPredicted RBP20.65■□□□□ 0.9
PNKP-206ENST00000595792 MTIF3Q9H2K0 278 aaKnown RBP20.65■□□□□ 0.9
PNKP-206ENST00000595792 PNMA6FA0A0J9YX94 578 aa20.64■□□□□ 0.89
PNKP-206ENST00000595792 DDAH1O94760 285 aa20.64■□□□□ 0.89
PNKP-206ENST00000595792 ZNF286BP0CG31 522 aa20.64■□□□□ 0.89
PNKP-206ENST00000595792 PGM5Q15124 567 aa20.64■□□□□ 0.89
PNKP-206ENST00000595792 FCHSD1Q86WN1 690 aa20.64■□□□□ 0.89
PNKP-206ENST00000595792 RPUSD2Q8IZ73 545 aaKnown RBP20.64■□□□□ 0.89
PNKP-206ENST00000595792 CMTR1Q8N1G2 835 aaKnown RBP20.64■□□□□ 0.89
PNKP-206ENST00000595792 SRBD1Q8N5C6 995 aaKnown RBP20.64■□□□□ 0.89
PNKP-206ENST00000595792 GPKOWQ92917 476 aaPredicted RBP eCLIP20.64■□□□□ 0.89
PNKP-206ENST00000595792 TCEANC2Q96MN5 208 aa20.64■□□□□ 0.89
PNKP-206ENST00000595792 MAP3K14Q99558 947 aa20.64■□□□□ 0.89
PNKP-206ENST00000595792 NOD1Q9Y239 953 aa20.64■□□□□ 0.89
PNKP-206ENST00000595792 CHD7Q9P2D1 2997 aa20.64■□□□□ 0.89
PNKP-206ENST00000595792 LIFRP42702 1097 aa20.63■□□□□ 0.89
PNKP-206ENST00000595792 EXOSC10Q01780 885 aaKnown RBP20.63■□□□□ 0.89
PNKP-206ENST00000595792 RAB30Q15771 203 aa20.63■□□□□ 0.89
PNKP-206ENST00000595792 PTGISQ16647 500 aa20.63■□□□□ 0.89
PNKP-206ENST00000595792 SPZ1Q9BXG8 430 aa20.63■□□□□ 0.89
PNKP-206ENST00000595792 MSRAQ9UJ68 235 aa20.63■□□□□ 0.89
PNKP-206ENST00000595792 SLC4A7Q9Y6M7 1214 aa20.63■□□□□ 0.89
PNKP-206ENST00000595792 IQCF3P0C7M6 154 aa20.62■□□□□ 0.89
PNKP-206ENST00000595792 PTPN11Q06124 597 aaPredicted RBP20.62■□□□□ 0.89
PNKP-206ENST00000595792 TSGA10IPQ3SY00 556 aa20.62■□□□□ 0.89
PNKP-206ENST00000595792 DHX37Q8IY37 1157 aaKnown RBP20.62■□□□□ 0.89
PNKP-206ENST00000595792 DHX38Q92620 1227 aaKnown RBP20.62■□□□□ 0.89
PNKP-206ENST00000595792 ALG1Q9BT22 464 aa20.62■□□□□ 0.89
PNKP-206ENST00000595792 GCOM1H8Y6P7 765 aaPredicted RBP20.61■□□□□ 0.89
PNKP-206ENST00000595792 PITPNM1O00562 1244 aa20.61■□□□□ 0.89
PNKP-206ENST00000595792 POLR2MP0CAP2 368 aa20.61■□□□□ 0.89
PNKP-206ENST00000595792 CASTP20810 708 aaKnown RBP20.61■□□□□ 0.89
PNKP-206ENST00000595792 PSEN2P49810 448 aa20.61■□□□□ 0.89
PNKP-206ENST00000595792 SP2Q02086 613 aa20.61■□□□□ 0.89
PNKP-206ENST00000595792 ADGRE1Q14246 886 aa20.61■□□□□ 0.89
PNKP-206ENST00000595792 DGKDQ16760 1214 aa20.61■□□□□ 0.89
PNKP-206ENST00000595792 NFXL1Q6ZNB6 911 aa20.61■□□□□ 0.89
PNKP-206ENST00000595792 VSIG10LQ86VR7 867 aa20.61■□□□□ 0.89
PNKP-206ENST00000595792 CTCFLQ8NI51 663 aaPredicted RBP20.61■□□□□ 0.89
PNKP-206ENST00000595792 PPM1EQ8WY54 764 aa20.61■□□□□ 0.89
PNKP-206ENST00000595792 EMID1Q96A84 441 aaPredicted RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms