RNA–Protein interactions for RNA: ENST00000595566.1

LINC01872-202, Transcript of long intergenic non-protein coding RNA 1872, humanhuman

TSL 3

Gene LINC01872, Length 487 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01872-202ENST00000595566 GTF3C3Q9Y5Q9 886 aa8.61□□□□□ -1.03
LINC01872-202ENST00000595566 ASB14A6NK59 587 aa8.6□□□□□ -1.03
LINC01872-202ENST00000595566 RAD21O60216 631 aa8.6□□□□□ -1.03
LINC01872-202ENST00000595566 USP5P45974 858 aa8.6□□□□□ -1.03
LINC01872-202ENST00000595566 RBL2Q08999 1139 aa8.6□□□□□ -1.03
LINC01872-202ENST00000595566 DUSP28Q4G0W2 176 aa8.6□□□□□ -1.03
LINC01872-202ENST00000595566 FAM83BQ5T0W9 1011 aa8.6□□□□□ -1.03
LINC01872-202ENST00000595566 TRAF7Q6Q0C0 670 aa8.6□□□□□ -1.03
LINC01872-202ENST00000595566 TTC6Q86TZ1 520 aa8.6□□□□□ -1.03
LINC01872-202ENST00000595566 OR6J1Q8NGC5 347 aa8.6□□□□□ -1.03
LINC01872-202ENST00000595566 XAGE2Q96GT9 111 aa8.6□□□□□ -1.03
LINC01872-202ENST00000595566 ARHGEF10LQ9HCE6 1279 aa8.6□□□□□ -1.03
LINC01872-202ENST00000595566 RAVER2Q9HCJ3 691 aaKnown RBP8.6□□□□□ -1.03
LINC01872-202ENST00000595566 FBXL21Q9UKT6 434 aa8.6□□□□□ -1.03
LINC01872-202ENST00000595566 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.6□□□□□ -1.03
LINC01872-202ENST00000595566 USP17L12C9JPN9 530 aa8.59□□□□□ -1.03
LINC01872-202ENST00000595566 USP17L21D6R901 530 aa8.59□□□□□ -1.03
LINC01872-202ENST00000595566 APAF1O14727 1248 aa8.59□□□□□ -1.03
LINC01872-202ENST00000595566 CIAO1O76071 339 aa8.59□□□□□ -1.03
LINC01872-202ENST00000595566 RBM25P49756 843 aaKnown RBP8.59□□□□□ -1.03
LINC01872-202ENST00000595566 TMEM179Q6ZVK1 233 aa8.59□□□□□ -1.03
LINC01872-202ENST00000595566 C1orf210Q8IVY1 113 aa8.59□□□□□ -1.03
LINC01872-202ENST00000595566 SPPL3Q8TCT6 385 aa8.59□□□□□ -1.03
LINC01872-202ENST00000595566 ATP8B4Q8TF62 1192 aa8.59□□□□□ -1.03
LINC01872-202ENST00000595566 SH2D4AQ9H788 454 aa8.59□□□□□ -1.03
LINC01872-202ENST00000595566 GPR108Q9NPR9 543 aa8.59□□□□□ -1.03
LINC01872-202ENST00000595566 HOMER2Q9NSB8 354 aa8.59□□□□□ -1.03
LINC01872-202ENST00000595566 BPTFQ12830 3046 aa8.59□□□□□ -1.03
LINC01872-202ENST00000595566 CACNA1FO60840 1977 aa8.59□□□□□ -1.03
LINC01872-202ENST00000595566 CNOT1A5YKK6 2376 aaKnown RBP8.58□□□□□ -1.04
LINC01872-202ENST00000595566 CACNA1IQ9P0X4 2223 aa8.58□□□□□ -1.04
LINC01872-202ENST00000595566 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.58□□□□□ -1.04
LINC01872-202ENST00000595566 ITGB1P05556 798 aa8.58□□□□□ -1.04
LINC01872-202ENST00000595566 DCNP07585 359 aaKnown RBP8.58□□□□□ -1.04
LINC01872-202ENST00000595566 TECP42680 631 aa8.58□□□□□ -1.04
LINC01872-202ENST00000595566 EVX2Q03828 476 aa8.58□□□□□ -1.04
LINC01872-202ENST00000595566 ICA1Q05084 483 aa8.58□□□□□ -1.04
LINC01872-202ENST00000595566 TBC1D8BQ0IIM8 1120 aa8.58□□□□□ -1.04
LINC01872-202ENST00000595566 MVPQ14764 893 aaKnown RBP8.58□□□□□ -1.04
LINC01872-202ENST00000595566 PLEKHG4Q58EX7 1191 aa8.58□□□□□ -1.04
LINC01872-202ENST00000595566 BRDTQ58F21 947 aaPredicted RBP8.58□□□□□ -1.04
LINC01872-202ENST00000595566 ANKRD54Q6NXT1 300 aa8.58□□□□□ -1.04
LINC01872-202ENST00000595566 SYCE2Q6PIF2 218 aa8.58□□□□□ -1.04
LINC01872-202ENST00000595566 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.58□□□□□ -1.04
LINC01872-202ENST00000595566 MICAL1Q8TDZ2 1067 aa8.58□□□□□ -1.04
LINC01872-202ENST00000595566 POF1BQ8WVV4 589 aa8.58□□□□□ -1.04
LINC01872-202ENST00000595566 CLP1Q92989 425 aaKnown RBP8.58□□□□□ -1.04
LINC01872-202ENST00000595566 WNT8BQ93098 351 aa8.58□□□□□ -1.04
LINC01872-202ENST00000595566 KIF12Q96FN5 646 aa8.58□□□□□ -1.04
LINC01872-202ENST00000595566 HNRNPABQ99729 332 aaKnown RBP8.58□□□□□ -1.04
LINC01872-202ENST00000595566 SLF1Q9BQI6 1058 aa8.58□□□□□ -1.04
LINC01872-202ENST00000595566 PLVAPQ9BX97 442 aa8.58□□□□□ -1.04
LINC01872-202ENST00000595566 WDR11Q9BZH6 1224 aa8.58□□□□□ -1.04
LINC01872-202ENST00000595566 POMKQ9H5K3 350 aa8.58□□□□□ -1.04
LINC01872-202ENST00000595566 RNF216Q9NWF9 866 aaPredicted RBP8.58□□□□□ -1.04
LINC01872-202ENST00000595566 ANKFY1Q9P2R3 1169 aa8.58□□□□□ -1.04
LINC01872-202ENST00000595566 FBXO40Q9UH90 709 aa8.58□□□□□ -1.04
LINC01872-202ENST00000595566 SMG5Q9UPR3 1016 aaKnown RBP8.58□□□□□ -1.04
LINC01872-202ENST00000595566 COG6Q9Y2V7 657 aa8.58□□□□□ -1.04
LINC01872-202ENST00000595566 ADGRA3Q8IWK6 1321 aa8.57□□□□□ -1.04
LINC01872-202ENST00000595566 LAMA5O15230 3695 aa8.57□□□□□ -1.04
LINC01872-202ENST00000595566 POTEMA6NI47 508 aa8.57□□□□□ -1.04
LINC01872-202ENST00000595566 SPTLC1O15269 473 aa8.57□□□□□ -1.04
LINC01872-202ENST00000595566 KPNA6O60684 536 aa8.57□□□□□ -1.04
LINC01872-202ENST00000595566 POLR3DP05423 398 aaPredicted RBP8.57□□□□□ -1.04
LINC01872-202ENST00000595566 NCLP19338 710 aaKnown RBP8.57□□□□□ -1.04
LINC01872-202ENST00000595566 RFX1P22670 979 aa8.57□□□□□ -1.04
LINC01872-202ENST00000595566 IL15P40933 162 aaPredicted RBP8.57□□□□□ -1.04
LINC01872-202ENST00000595566 GABPAQ06546 454 aa8.57□□□□□ -1.04
LINC01872-202ENST00000595566 SPEM2Q0P670 501 aa8.57□□□□□ -1.04
LINC01872-202ENST00000595566 WDR43Q15061 677 aaKnown RBP eCLIP8.57□□□□□ -1.04
LINC01872-202ENST00000595566 POTEGQ6S5H5 508 aa8.57□□□□□ -1.04
LINC01872-202ENST00000595566 CHST13Q8NET6 341 aa8.57□□□□□ -1.04
LINC01872-202ENST00000595566 NUP88Q99567 741 aaPredicted RBP8.57□□□□□ -1.04
LINC01872-202ENST00000595566 VTA1Q9NP79 307 aa8.57□□□□□ -1.04
LINC01872-202ENST00000595566 CTDP1Q9Y5B0 961 aaPredicted RBP8.57□□□□□ -1.04
LINC01872-202ENST00000595566 NBEAQ8NFP9 2946 aa8.57□□□□□ -1.04
LINC01872-202ENST00000595566 EMSYQ7Z589 1322 aa8.56□□□□□ -1.04
LINC01872-202ENST00000595566 COL4A3Q01955 1670 aa8.56□□□□□ -1.04
LINC01872-202ENST00000595566 HELZ2Q9BYK8 2649 aaKnown RBP8.56□□□□□ -1.04
LINC01872-202ENST00000595566 ATP2A1O14983 1001 aa8.56□□□□□ -1.04
LINC01872-202ENST00000595566 ZBED4O75132 1171 aa8.56□□□□□ -1.04
LINC01872-202ENST00000595566 AKR1B1P15121 316 aa8.56□□□□□ -1.04
LINC01872-202ENST00000595566 BTG3Q14201 252 aaPredicted RBP8.56□□□□□ -1.04
LINC01872-202ENST00000595566 DUSP6Q16828 381 aa8.56□□□□□ -1.04
LINC01872-202ENST00000595566 TRIM71Q2Q1W2 868 aaKnown RBP8.56□□□□□ -1.04
LINC01872-202ENST00000595566 DIEXFQ68CQ4 756 aaKnown RBP8.56□□□□□ -1.04
LINC01872-202ENST00000595566 SESTD1Q86VW0 696 aa8.56□□□□□ -1.04
LINC01872-202ENST00000595566 MAML2Q8IZL2 1156 aaPredicted RBP8.56□□□□□ -1.04
LINC01872-202ENST00000595566 MIGA1Q8NAN2 632 aa8.56□□□□□ -1.04
LINC01872-202ENST00000595566 TDRD5Q8NAT2 981 aaKnown RBP8.56□□□□□ -1.04
LINC01872-202ENST00000595566 KLHL23Q8NBE8 558 aa8.56□□□□□ -1.04
LINC01872-202ENST00000595566 ADAM32Q8TC27 787 aa8.56□□□□□ -1.04
LINC01872-202ENST00000595566 ATRIPQ8WXE1 791 aa8.56□□□□□ -1.04
LINC01872-202ENST00000595566 DDX1Q92499 740 aaKnown RBP8.56□□□□□ -1.04
LINC01872-202ENST00000595566 SEPT8Q92599 483 aa8.56□□□□□ -1.04
LINC01872-202ENST00000595566 P2RX5Q93086 422 aa8.56□□□□□ -1.04
LINC01872-202ENST00000595566 NEUROD6Q96NK8 337 aa8.56□□□□□ -1.04
LINC01872-202ENST00000595566 A1CFQ9NQ94 594 aaKnown RBP8.56□□□□□ -1.04
LINC01872-202ENST00000595566 FBXO3Q9UK99 471 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms