RNA–Protein interactions for RNA: ENST00000595343.5

PDE4C-208, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 420 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-208ENST00000595343 STXBP2Q15833 593 aa21.78■■□□□ 1.08
PDE4C-208ENST00000595343 SPRED2Q7Z698 418 aa21.78■■□□□ 1.08
PDE4C-208ENST00000595343 ADGRF4Q8IZF3 695 aa21.78■■□□□ 1.08
PDE4C-208ENST00000595343 DHX38Q92620 1227 aaKnown RBP21.78■■□□□ 1.08
PDE4C-208ENST00000595343 IWS1Q96ST2 819 aa21.78■■□□□ 1.08
PDE4C-208ENST00000595343 RMDN3Q96TC7 470 aa21.78■■□□□ 1.08
PDE4C-208ENST00000595343 COG5Q9UP83 839 aa21.78■■□□□ 1.08
PDE4C-208ENST00000595343 GRB10Q13322 594 aa21.77■■□□□ 1.08
PDE4C-208ENST00000595343 CCDC178Q5BJE1 867 aa21.77■■□□□ 1.08
PDE4C-208ENST00000595343 LRRC8DQ7L1W4 858 aa21.77■■□□□ 1.08
PDE4C-208ENST00000595343 IQCA1Q86XH1 822 aa21.77■■□□□ 1.08
PDE4C-208ENST00000595343 MCF2L2Q86YR7 1114 aa21.77■■□□□ 1.08
PDE4C-208ENST00000595343 LNPKQ9C0E8 428 aa21.77■■□□□ 1.08
PDE4C-208ENST00000595343 KAT14Q9H8E8 782 aa21.77■■□□□ 1.08
PDE4C-208ENST00000595343 KDM4AO75164 1064 aa21.76■■□□□ 1.07
PDE4C-208ENST00000595343 SDSP20132 328 aa21.76■■□□□ 1.07
PDE4C-208ENST00000595343 NT5C2P49902 561 aa21.76■■□□□ 1.07
PDE4C-208ENST00000595343 RBL2Q08999 1139 aa21.76■■□□□ 1.07
PDE4C-208ENST00000595343 DGKDQ16760 1214 aa21.76■■□□□ 1.07
PDE4C-208ENST00000595343 QRICH1Q2TAL8 776 aa21.76■■□□□ 1.07
PDE4C-208ENST00000595343 TMCO2Q7Z6W1 182 aaPredicted RBP21.76■■□□□ 1.07
PDE4C-208ENST00000595343 ANKS1AQ92625 1134 aa21.76■■□□□ 1.07
PDE4C-208ENST00000595343 GTF2IRD1Q9UHL9 959 aa21.76■■□□□ 1.07
PDE4C-208ENST00000595343 DDX41Q9UJV9 622 aaKnown RBP21.76■■□□□ 1.07
PDE4C-208ENST00000595343 PTPRSQ13332 1948 aa21.76■■□□□ 1.07
PDE4C-208ENST00000595343 LCHNA4D1U4 455 aa21.75■■□□□ 1.07
PDE4C-208ENST00000595343 LPXNO60711 386 aa21.75■■□□□ 1.07
PDE4C-208ENST00000595343 PARNO95453 639 aaKnown RBP21.75■■□□□ 1.07
PDE4C-208ENST00000595343 CXCL10P02778 98 aa21.75■■□□□ 1.07
PDE4C-208ENST00000595343 ASPRV1Q53RT3 343 aa21.75■■□□□ 1.07
PDE4C-208ENST00000595343 ARHGEF16Q5VV41 709 aa21.75■■□□□ 1.07
PDE4C-208ENST00000595343 CNKSR3Q6P9H4 555 aa21.75■■□□□ 1.07
PDE4C-208ENST00000595343 FBXO11Q86XK2 927 aa21.75■■□□□ 1.07
PDE4C-208ENST00000595343 ZBED2Q9BTP6 218 aa21.75■■□□□ 1.07
PDE4C-208ENST00000595343 C1QTNF1Q9BXJ1 281 aa21.75■■□□□ 1.07
PDE4C-208ENST00000595343 HDAC6Q9UBN7 1215 aa21.75■■□□□ 1.07
PDE4C-208ENST00000595343 MRPL11Q9Y3B7 192 aaKnown RBP21.75■■□□□ 1.07
PDE4C-208ENST00000595343 KIAA1217Q5T5P2 1943 aa21.74■■□□□ 1.07
PDE4C-208ENST00000595343 NBNO60934 754 aa21.74■■□□□ 1.07
PDE4C-208ENST00000595343 EIF3JO75822 258 aaKnown RBP21.74■■□□□ 1.07
PDE4C-208ENST00000595343 CKBP12277 381 aa21.74■■□□□ 1.07
PDE4C-208ENST00000595343 EIF2AK2P19525 551 aaKnown RBP21.74■■□□□ 1.07
PDE4C-208ENST00000595343 DEFB103AP81534 67 aa21.74■■□□□ 1.07
PDE4C-208ENST00000595343 C7orf31Q8N865 590 aa21.74■■□□□ 1.07
PDE4C-208ENST00000595343 ENAHQ8N8S7 591 aaPredicted RBP21.74■■□□□ 1.07
PDE4C-208ENST00000595343 HLA-CQ95604 372 aa21.74■■□□□ 1.07
PDE4C-208ENST00000595343 EMID1Q96A84 441 aaPredicted RBP21.74■■□□□ 1.07
PDE4C-208ENST00000595343 ZSCAN10Q96SZ4 725 aaPredicted RBP21.74■■□□□ 1.07
PDE4C-208ENST00000595343 JMJD4Q9H9V9 463 aa21.74■■□□□ 1.07
PDE4C-208ENST00000595343 B4E1Z4 1266 aa21.73■■□□□ 1.07
PDE4C-208ENST00000595343 DHX16O60231 1041 aaKnown RBP21.73■■□□□ 1.07
PDE4C-208ENST00000595343 CENPBP07199 599 aaPredicted RBP21.73■■□□□ 1.07
PDE4C-208ENST00000595343 NR3C2P08235 984 aa21.73■■□□□ 1.07
PDE4C-208ENST00000595343 PARP1P09874 1014 aaKnown RBP21.73■■□□□ 1.07
PDE4C-208ENST00000595343 PSEN2P49810 448 aa21.73■■□□□ 1.07
PDE4C-208ENST00000595343 TCTN1Q2MV58 587 aa21.73■■□□□ 1.07
PDE4C-208ENST00000595343 ALG1Q9BT22 464 aa21.73■■□□□ 1.07
PDE4C-208ENST00000595343 VAT1LQ9HCJ6 419 aa21.73■■□□□ 1.07
PDE4C-208ENST00000595343 PXMP2Q9NR77 195 aa21.73■■□□□ 1.07
PDE4C-208ENST00000595343 MRVI1Q9Y6F6 885 aa21.73■■□□□ 1.07
PDE4C-208ENST00000595343 LAMA4Q16363 1823 aa21.72■■□□□ 1.07
PDE4C-208ENST00000595343 LAMC2Q13753 1193 aa21.72■■□□□ 1.07
PDE4C-208ENST00000595343 MFSD10Q14728 455 aa21.72■■□□□ 1.07
PDE4C-208ENST00000595343 PPTC7Q8NI37 304 aa21.72■■□□□ 1.07
PDE4C-208ENST00000595343 KATNAL1Q9BW62 490 aa21.72■■□□□ 1.07
PDE4C-208ENST00000595343 LMCD1Q9NZU5 365 aa21.72■■□□□ 1.07
PDE4C-208ENST00000595343 ZSWIM5Q9P217 1185 aa21.72■■□□□ 1.07
PDE4C-208ENST00000595343 MYH6P13533 1939 aa21.71■■□□□ 1.07
PDE4C-208ENST00000595343 ABHD14A-ACY1A0A1B0GW23 586 aa21.71■■□□□ 1.07
PDE4C-208ENST00000595343 HAS3O00219 553 aa21.71■■□□□ 1.07
PDE4C-208ENST00000595343 GJB5O95377 273 aa21.71■■□□□ 1.07
PDE4C-208ENST00000595343 F2P00734 622 aa21.71■■□□□ 1.07
PDE4C-208ENST00000595343 CFBP00751 764 aa21.71■■□□□ 1.07
PDE4C-208ENST00000595343 ZNF286BP0CG31 522 aa21.71■■□□□ 1.07
PDE4C-208ENST00000595343 PTK7Q13308 1070 aa21.71■■□□□ 1.07
PDE4C-208ENST00000595343 KIAA0753Q2KHM9 967 aa21.71■■□□□ 1.07
PDE4C-208ENST00000595343 CWC27Q6UX04 472 aaKnown RBP21.71■■□□□ 1.07
PDE4C-208ENST00000595343 DHX37Q8IY37 1157 aaKnown RBP21.71■■□□□ 1.07
PDE4C-208ENST00000595343 GDPD5Q8WTR4 605 aa21.71■■□□□ 1.07
PDE4C-208ENST00000595343 RAD9AQ99638 391 aa21.71■■□□□ 1.07
PDE4C-208ENST00000595343 COL4A4P53420 1690 aaPredicted RBP21.71■■□□□ 1.07
PDE4C-208ENST00000595343 BRWD1Q9NSI6 2320 aa21.71■■□□□ 1.07
PDE4C-208ENST00000595343 OPLAHO14841 1288 aa21.7■■□□□ 1.06
PDE4C-208ENST00000595343 PLA2G5P39877 138 aa21.7■■□□□ 1.06
PDE4C-208ENST00000595343 HSD17B4P51659 736 aa21.7■■□□□ 1.06
PDE4C-208ENST00000595343 TRIM71Q2Q1W2 868 aaKnown RBP21.7■■□□□ 1.06
PDE4C-208ENST00000595343 B4GALNT3Q6L9W6 998 aa21.7■■□□□ 1.06
PDE4C-208ENST00000595343 TRAF7Q6Q0C0 670 aa21.7■■□□□ 1.06
PDE4C-208ENST00000595343 WNT8BQ93098 351 aa21.7■■□□□ 1.06
PDE4C-208ENST00000595343 EPHX3Q9H6B9 360 aa21.7■■□□□ 1.06
PDE4C-208ENST00000595343 RBAK-RBAKDNI3L0D1 243 aa21.69■■□□□ 1.06
PDE4C-208ENST00000595343 EFCAB14O75071 495 aa21.69■■□□□ 1.06
PDE4C-208ENST00000595343 HOXD8P13378 290 aaPredicted RBP21.69■■□□□ 1.06
PDE4C-208ENST00000595343 ERVK-21P61565 698 aa21.69■■□□□ 1.06
PDE4C-208ENST00000595343 ZNF200P98182 395 aaPredicted RBP21.69■■□□□ 1.06
PDE4C-208ENST00000595343 IKBKEQ14164 716 aa21.69■■□□□ 1.06
PDE4C-208ENST00000595343 ZNF618Q5T7W0 954 aa21.69■■□□□ 1.06
PDE4C-208ENST00000595343 PLEKHM2Q8IWE5 1019 aa21.69■■□□□ 1.06
PDE4C-208ENST00000595343 SMC5Q8IY18 1101 aa21.69■■□□□ 1.06
PDE4C-208ENST00000595343 AMNQ9BXJ7 453 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms