RNA–Protein interactions for RNA: ENST00000595235.5

SSX4B-201, Transcript of SSX family member 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX4B, Length 1,221 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-201ENST00000595235 RAG1P15918 1043 aa6.78□□□□□ -1.32
SSX4B-201ENST00000595235 LIFRP42702 1097 aa6.78□□□□□ -1.32
SSX4B-201ENST00000595235 CPT1AP50416 773 aa6.78□□□□□ -1.32
SSX4B-201ENST00000595235 MRPL12P52815 198 aaKnown RBP6.78□□□□□ -1.32
SSX4B-201ENST00000595235 PURAQ00577 322 aaKnown RBP6.78□□□□□ -1.32
SSX4B-201ENST00000595235 ARHGAP1Q07960 439 aa6.78□□□□□ -1.32
SSX4B-201ENST00000595235 TTLL4Q14679 1199 aa6.78□□□□□ -1.32
SSX4B-201ENST00000595235 PGM5Q15124 567 aa6.78□□□□□ -1.32
SSX4B-201ENST00000595235 STXBP2Q15833 593 aa6.78□□□□□ -1.32
SSX4B-201ENST00000595235 SEPT14Q6ZU15 432 aa6.78□□□□□ -1.32
SSX4B-201ENST00000595235 Q7L0L9 218 aa6.78□□□□□ -1.32
SSX4B-201ENST00000595235 FCHSD1Q86WN1 690 aa6.78□□□□□ -1.32
SSX4B-201ENST00000595235 MICU3Q86XE3 530 aa6.78□□□□□ -1.32
SSX4B-201ENST00000595235 SLC39A7Q92504 469 aa6.78□□□□□ -1.32
SSX4B-201ENST00000595235 GPKOWQ92917 476 aaPredicted RBP eCLIP6.78□□□□□ -1.32
SSX4B-201ENST00000595235 NEK1Q96PY6 1258 aa6.78□□□□□ -1.32
SSX4B-201ENST00000595235 IWS1Q96ST2 819 aa6.78□□□□□ -1.32
SSX4B-201ENST00000595235 PDCD2LQ9BRP1 358 aa6.78□□□□□ -1.32
SSX4B-201ENST00000595235 PPP1R12CQ9BZL4 782 aa6.78□□□□□ -1.32
SSX4B-201ENST00000595235 BMP2KQ9NSY1 1161 aaPredicted RBP6.78□□□□□ -1.32
SSX4B-201ENST00000595235 TRPC6Q9Y210 931 aa6.78□□□□□ -1.32
SSX4B-201ENST00000595235 SCN5AQ14524 2016 aa6.77□□□□□ -1.32
SSX4B-201ENST00000595235 FRMPD4Q14CM0 1322 aa6.77□□□□□ -1.32
SSX4B-201ENST00000595235 CNTNAP5Q8WYK1 1306 aa6.77□□□□□ -1.32
SSX4B-201ENST00000595235 GBF1Q92538 1859 aa6.77□□□□□ -1.33
SSX4B-201ENST00000595235 hCG_1642624A0A1W2PR95 340 aa6.77□□□□□ -1.33
SSX4B-201ENST00000595235 A6NJR5 290 aa6.77□□□□□ -1.33
SSX4B-201ENST00000595235 GCOM1H8Y6P7 765 aaPredicted RBP6.77□□□□□ -1.33
SSX4B-201ENST00000595235 TLR3O15455 904 aaKnown RBP6.77□□□□□ -1.33
SSX4B-201ENST00000595235 SORBS3O60504 671 aa6.77□□□□□ -1.33
SSX4B-201ENST00000595235 MMP3P08254 477 aa6.77□□□□□ -1.33
SSX4B-201ENST00000595235 POLR2MP0CAP2 368 aa6.77□□□□□ -1.33
SSX4B-201ENST00000595235 CALM1P0DP23 149 aa6.77□□□□□ -1.33
SSX4B-201ENST00000595235 CALM2P0DP24 149 aa6.77□□□□□ -1.33
SSX4B-201ENST00000595235 CALM3P0DP25 149 aa6.77□□□□□ -1.33
SSX4B-201ENST00000595235 MYCLP12524 364 aaPredicted RBP6.77□□□□□ -1.33
SSX4B-201ENST00000595235 CPA1P15085 419 aa6.77□□□□□ -1.33
SSX4B-201ENST00000595235 CSF2RAP15509 400 aa6.77□□□□□ -1.33
SSX4B-201ENST00000595235 KIF5BP33176 963 aa6.77□□□□□ -1.33
SSX4B-201ENST00000595235 CYP2C18P33260 490 aa6.77□□□□□ -1.33
SSX4B-201ENST00000595235 EXOSC10Q01780 885 aaKnown RBP6.77□□□□□ -1.33
SSX4B-201ENST00000595235 FPGSQ05932 587 aa6.77□□□□□ -1.33
SSX4B-201ENST00000595235 TSGA10IPQ3SY00 556 aa6.77□□□□□ -1.33
SSX4B-201ENST00000595235 RNF20Q5VTR2 975 aa6.77□□□□□ -1.33
SSX4B-201ENST00000595235 APOA5Q6Q788 366 aa6.77□□□□□ -1.33
SSX4B-201ENST00000595235 TMTC3Q6ZXV5 915 aa6.77□□□□□ -1.33
SSX4B-201ENST00000595235 SGMS1Q86VZ5 419 aa6.77□□□□□ -1.33
SSX4B-201ENST00000595235 TMTC2Q8N394 836 aa6.77□□□□□ -1.33
SSX4B-201ENST00000595235 SAMD3Q8N6K7 520 aa6.77□□□□□ -1.33
SSX4B-201ENST00000595235 AFG1LQ8WV93 481 aa6.77□□□□□ -1.33
SSX4B-201ENST00000595235 KCNB2Q92953 911 aa6.77□□□□□ -1.33
SSX4B-201ENST00000595235 RRP36Q96EU6 259 aaKnown RBP6.77□□□□□ -1.33
SSX4B-201ENST00000595235 MTG1Q9BT17 334 aaPredicted RBP6.77□□□□□ -1.33
SSX4B-201ENST00000595235 TRPV6Q9H1D0 765 aa6.77□□□□□ -1.33
SSX4B-201ENST00000595235 ALDH8A1Q9H2A2 487 aaPredicted RBP6.77□□□□□ -1.33
SSX4B-201ENST00000595235 TRMT13Q9NUP7 481 aaKnown RBP6.77□□□□□ -1.33
SSX4B-201ENST00000595235 POLR3EQ9NVU0 708 aa6.77□□□□□ -1.33
SSX4B-201ENST00000595235 MAP3K20Q9NYL2 800 aaKnown RBP6.77□□□□□ -1.33
SSX4B-201ENST00000595235 METRNQ9UJH8 293 aa6.77□□□□□ -1.33
SSX4B-201ENST00000595235 DDX41Q9UJV9 622 aaKnown RBP6.77□□□□□ -1.33
SSX4B-201ENST00000595235 BRPF3Q9ULD4 1205 aa6.77□□□□□ -1.33
SSX4B-201ENST00000595235 SLC12A7Q9Y666 1083 aa6.77□□□□□ -1.33
SSX4B-201ENST00000595235 RBAK-RBAKDNI3L0D1 243 aa6.76□□□□□ -1.33
SSX4B-201ENST00000595235 MEIS2O14770 477 aa6.76□□□□□ -1.33
SSX4B-201ENST00000595235 EIF3JO75822 258 aaKnown RBP6.76□□□□□ -1.33
SSX4B-201ENST00000595235 GH1P01241 217 aa6.76□□□□□ -1.33
SSX4B-201ENST00000595235 NEFLP07196 543 aa6.76□□□□□ -1.33
SSX4B-201ENST00000595235 ACRP10323 421 aa6.76□□□□□ -1.33
SSX4B-201ENST00000595235 CYP2C9P11712 490 aa6.76□□□□□ -1.33
SSX4B-201ENST00000595235 UBA1P22314 1058 aaKnown RBP6.76□□□□□ -1.33
SSX4B-201ENST00000595235 SMARCA1P28370 1054 aa6.76□□□□□ -1.33
SSX4B-201ENST00000595235 HSPA4P34932 840 aa6.76□□□□□ -1.33
SSX4B-201ENST00000595235 GNAQP50148 359 aa6.76□□□□□ -1.33
SSX4B-201ENST00000595235 MRPS9P82933 396 aaKnown RBP6.76□□□□□ -1.33
SSX4B-201ENST00000595235 SP2Q02086 613 aa6.76□□□□□ -1.33
SSX4B-201ENST00000595235 SEMA3FQ13275 785 aa6.76□□□□□ -1.33
SSX4B-201ENST00000595235 NBPF20Q3BBV1 942 aa6.76□□□□□ -1.33
SSX4B-201ENST00000595235 MFSD5Q6N075 450 aa6.76□□□□□ -1.33
SSX4B-201ENST00000595235 GPR153Q6NV75 609 aa6.76□□□□□ -1.33
SSX4B-201ENST00000595235 USP17L6PQ6QN14 398 aa6.76□□□□□ -1.33
SSX4B-201ENST00000595235 C16orf59Q7L2K0 433 aa6.76□□□□□ -1.33
SSX4B-201ENST00000595235 DHX32Q7L7V1 743 aaKnown RBP6.76□□□□□ -1.33
SSX4B-201ENST00000595235 VSIG10LQ86VR7 867 aa6.76□□□□□ -1.33
SSX4B-201ENST00000595235 CCDC82Q8N4S0 544 aa6.76□□□□□ -1.33
SSX4B-201ENST00000595235 DEFB123Q8N688 67 aa6.76□□□□□ -1.33
SSX4B-201ENST00000595235 FANCBQ8NB91 859 aa6.76□□□□□ -1.33
SSX4B-201ENST00000595235 KAT2BQ92831 832 aa6.76□□□□□ -1.33
SSX4B-201ENST00000595235 RNPC3Q96LT9 517 aaKnown RBP6.76□□□□□ -1.33
SSX4B-201ENST00000595235 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.76□□□□□ -1.33
SSX4B-201ENST00000595235 LZTS2Q9BRK4 669 aa6.76□□□□□ -1.33
SSX4B-201ENST00000595235 NOC4LQ9BVI4 516 aaKnown RBP6.76□□□□□ -1.33
SSX4B-201ENST00000595235 WNT8AQ9H1J5 351 aa6.76□□□□□ -1.33
SSX4B-201ENST00000595235 HIPK3Q9H422 1215 aa6.76□□□□□ -1.33
SSX4B-201ENST00000595235 BCAS3Q9H6U6 928 aa6.76□□□□□ -1.33
SSX4B-201ENST00000595235 SEC63Q9UGP8 760 aaKnown RBP6.76□□□□□ -1.33
SSX4B-201ENST00000595235 SNX14Q9Y5W7 946 aa6.76□□□□□ -1.33
SSX4B-201ENST00000595235 MRVI1Q9Y6F6 885 aa6.76□□□□□ -1.33
SSX4B-201ENST00000595235 DNAH12Q6ZR08 3092 aa6.75□□□□□ -1.33
SSX4B-201ENST00000595235 TRIOBPQ9H2D6 2365 aa6.75□□□□□ -1.33
SSX4B-201ENST00000595235 KLF18A0A0U1RQI7 1052 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms