RNA–Protein interactions for RNA: ENST00000594794.5

HOMER3-207, Transcript of homer scaffold protein 3, humanhuman

TSL 5 BASIC

Gene HOMER3, Length 903 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-207ENST00000594794 STXBP2Q15833 593 aa28.06■■■□□ 2.08
HOMER3-207ENST00000594794 LY6KQ17RY6 165 aa28.06■■■□□ 2.08
HOMER3-207ENST00000594794 CASC1Q6TDU7 716 aa28.06■■■□□ 2.08
HOMER3-207ENST00000594794 ZNF654Q8IZM8 581 aa28.06■■■□□ 2.08
HOMER3-207ENST00000594794 PXMP2Q9NR77 195 aa28.06■■■□□ 2.08
HOMER3-207ENST00000594794 EYSQ5T1H1 3165 aa28.06■■■□□ 2.08
HOMER3-207ENST00000594794 BAZ2BQ9UIF8 2168 aaKnown RBP28.06■■■□□ 2.08
HOMER3-207ENST00000594794 PITPNM1O00562 1244 aa28.05■■■□□ 2.08
HOMER3-207ENST00000594794 NECTIN1Q15223 517 aa28.05■■■□□ 2.08
HOMER3-207ENST00000594794 NBPF20Q3BBV1 942 aa28.05■■■□□ 2.08
HOMER3-207ENST00000594794 COL25A1Q9BXS0 654 aaPredicted RBP28.05■■■□□ 2.08
HOMER3-207ENST00000594794 TRMT13Q9NUP7 481 aaKnown RBP28.05■■■□□ 2.08
HOMER3-207ENST00000594794 CXXC1Q9P0U4 656 aaPredicted RBP28.05■■■□□ 2.08
HOMER3-207ENST00000594794 MSRAQ9UJ68 235 aa28.05■■■□□ 2.08
HOMER3-207ENST00000594794 NR3C2P08235 984 aa28.04■■■□□ 2.08
HOMER3-207ENST00000594794 RFC2P35250 354 aa28.04■■■□□ 2.08
HOMER3-207ENST00000594794 LRRC2Q9BYS8 371 aa28.04■■■□□ 2.08
HOMER3-207ENST00000594794 MYO9BQ13459 2157 aa28.03■■■□□ 2.08
HOMER3-207ENST00000594794 KIAA1217Q5T5P2 1943 aa28.03■■■□□ 2.08
HOMER3-207ENST00000594794 PNMA6FA0A0J9YX94 578 aa28.03■■■□□ 2.08
HOMER3-207ENST00000594794 GRXCR1A8MXD5 290 aa28.03■■■□□ 2.08
HOMER3-207ENST00000594794 GH1P01241 217 aa28.03■■■□□ 2.08
HOMER3-207ENST00000594794 MCM5P33992 734 aa28.03■■■□□ 2.08
HOMER3-207ENST00000594794 PBX2P40425 430 aa28.03■■■□□ 2.08
HOMER3-207ENST00000594794 TRAF1Q13077 416 aa28.03■■■□□ 2.08
HOMER3-207ENST00000594794 NFXL1Q6ZNB6 911 aa28.03■■■□□ 2.08
HOMER3-207ENST00000594794 SESTD1Q86VW0 696 aa28.03■■■□□ 2.08
HOMER3-207ENST00000594794 RAB11FIP4Q86YS3 637 aa28.03■■■□□ 2.08
HOMER3-207ENST00000594794 VWCEQ96DN2 955 aa28.03■■■□□ 2.08
HOMER3-207ENST00000594794 SH2B2O14492 632 aaPredicted RBP28.02■■■□□ 2.08
HOMER3-207ENST00000594794 EIF3JO75822 258 aaKnown RBP28.02■■■□□ 2.08
HOMER3-207ENST00000594794 MYCLP12524 364 aaPredicted RBP28.02■■■□□ 2.08
HOMER3-207ENST00000594794 RXRAP19793 462 aa28.02■■■□□ 2.08
HOMER3-207ENST00000594794 CHMP4BP1P59074 171 aa28.02■■■□□ 2.08
HOMER3-207ENST00000594794 FAM47CQ5HY64 1035 aa28.02■■■□□ 2.08
HOMER3-207ENST00000594794 OTOP2Q7RTS6 562 aa28.02■■■□□ 2.08
HOMER3-207ENST00000594794 AFG1LQ8WV93 481 aa28.02■■■□□ 2.08
HOMER3-207ENST00000594794 EMID1Q96A84 441 aaPredicted RBP28.02■■■□□ 2.08
HOMER3-207ENST00000594794 ZFP91Q96JP5 570 aaPredicted RBP28.02■■■□□ 2.08
HOMER3-207ENST00000594794 ARHGAP1Q07960 439 aa28.01■■■□□ 2.07
HOMER3-207ENST00000594794 FCHSD1Q86WN1 690 aa28.01■■■□□ 2.07
HOMER3-207ENST00000594794 IL31RAQ8NI17 732 aa28.01■■■□□ 2.07
HOMER3-207ENST00000594794 CTCFLQ8NI51 663 aaPredicted RBP28.01■■■□□ 2.07
HOMER3-207ENST00000594794 GAS2L1Q99501 681 aaPredicted RBP28.01■■■□□ 2.07
HOMER3-207ENST00000594794 PDCD2LQ9BRP1 358 aa28.01■■■□□ 2.07
HOMER3-207ENST00000594794 SLC4A7Q9Y6M7 1214 aa28.01■■■□□ 2.07
HOMER3-207ENST00000594794 GCOM1H8Y6P7 765 aaPredicted RBP28■■■□□ 2.07
HOMER3-207ENST00000594794 DDAH1O94760 285 aa28■■■□□ 2.07
HOMER3-207ENST00000594794 PLEKHA8P1O95397 391 aa28■■■□□ 2.07
HOMER3-207ENST00000594794 POLR2MP0CAP2 368 aa28■■■□□ 2.07
HOMER3-207ENST00000594794 CYP2C9P11712 490 aa28■■■□□ 2.07
HOMER3-207ENST00000594794 CMTR1Q8N1G2 835 aaKnown RBP28■■■□□ 2.07
HOMER3-207ENST00000594794 SCLYQ96I15 445 aa28■■■□□ 2.07
HOMER3-207ENST00000594794 PRUNE2Q8WUY3 3088 aa28■■■□□ 2.07
HOMER3-207ENST00000594794 CCDC69A6NI79 296 aa27.99■■■□□ 2.07
HOMER3-207ENST00000594794 MMP3P08254 477 aa27.99■■■□□ 2.07
HOMER3-207ENST00000594794 CASTP20810 708 aaKnown RBP27.99■■■□□ 2.07
HOMER3-207ENST00000594794 BFSP2Q13515 415 aa27.99■■■□□ 2.07
HOMER3-207ENST00000594794 TMEM87BQ96K49 555 aa27.99■■■□□ 2.07
HOMER3-207ENST00000594794 DDX41Q9UJV9 622 aaKnown RBP27.99■■■□□ 2.07
HOMER3-207ENST00000594794 MRVI1Q9Y6F6 885 aa27.99■■■□□ 2.07
HOMER3-207ENST00000594794 SORBS3O60504 671 aa27.98■■■□□ 2.07
HOMER3-207ENST00000594794 RGS20O76081 388 aa27.98■■■□□ 2.07
HOMER3-207ENST00000594794 PGM5Q15124 567 aa27.98■■■□□ 2.07
HOMER3-207ENST00000594794 KCNV1Q6PIU1 500 aa27.98■■■□□ 2.07
HOMER3-207ENST00000594794 RETREG2Q8NC44 543 aa27.98■■■□□ 2.07
HOMER3-207ENST00000594794 MAP3K14Q99558 947 aa27.98■■■□□ 2.07
HOMER3-207ENST00000594794 MTA3Q9BTC8 594 aa27.98■■■□□ 2.07
HOMER3-207ENST00000594794 SLC28A3Q9HAS3 691 aa27.98■■■□□ 2.07
HOMER3-207ENST00000594794 PCDHA11Q9Y5I1 949 aa27.98■■■□□ 2.07
HOMER3-207ENST00000594794 VCANP13611 3396 aa27.98■■■□□ 2.07
HOMER3-207ENST00000594794 ACTN1P12814 892 aa27.97■■■□□ 2.07
HOMER3-207ENST00000594794 KIF5BP33176 963 aa27.97■■■□□ 2.07
HOMER3-207ENST00000594794 DGKDQ16760 1214 aa27.97■■■□□ 2.07
HOMER3-207ENST00000594794 SRBD1Q8N5C6 995 aaKnown RBP27.97■■■□□ 2.07
HOMER3-207ENST00000594794 CAGE1Q8TC20 777 aa27.97■■■□□ 2.07
HOMER3-207ENST00000594794 RRP36Q96EU6 259 aaKnown RBP27.97■■■□□ 2.07
HOMER3-207ENST00000594794 CCDC136Q96JN2 1154 aa27.97■■■□□ 2.07
HOMER3-207ENST00000594794 SPZ1Q9BXG8 430 aa27.97■■■□□ 2.07
HOMER3-207ENST00000594794 CDC45O75419 566 aa27.96■■■□□ 2.07
HOMER3-207ENST00000594794 IQCF3P0C7M6 154 aa27.96■■■□□ 2.07
HOMER3-207ENST00000594794 LAMC2Q13753 1193 aa27.96■■■□□ 2.07
HOMER3-207ENST00000594794 VSIG10LQ86VR7 867 aa27.96■■■□□ 2.07
HOMER3-207ENST00000594794 TMTC2Q8N394 836 aa27.96■■■□□ 2.07
HOMER3-207ENST00000594794 CCDC155Q8N6L0 562 aa27.96■■■□□ 2.07
HOMER3-207ENST00000594794 PHOSPHO2Q8TCD6 241 aa27.96■■■□□ 2.07
HOMER3-207ENST00000594794 PARNO95453 639 aaKnown RBP27.95■■■□□ 2.06
HOMER3-207ENST00000594794 HOXD8P13378 290 aaPredicted RBP27.95■■■□□ 2.06
HOMER3-207ENST00000594794 LIFRP42702 1097 aa27.95■■■□□ 2.06
HOMER3-207ENST00000594794 RBL2Q08999 1139 aa27.95■■■□□ 2.06
HOMER3-207ENST00000594794 PPTC7Q8NI37 304 aa27.95■■■□□ 2.06
HOMER3-207ENST00000594794 SYMPKQ92797 1274 aaKnown RBP27.95■■■□□ 2.06
HOMER3-207ENST00000594794 KAT2BQ92831 832 aa27.95■■■□□ 2.06
HOMER3-207ENST00000594794 TCEANC2Q96MN5 208 aa27.95■■■□□ 2.06
HOMER3-207ENST00000594794 KATNAL1Q9BW62 490 aa27.95■■■□□ 2.06
HOMER3-207ENST00000594794 NOD1Q9Y239 953 aa27.95■■■□□ 2.06
HOMER3-207ENST00000594794 YBX2Q9Y2T7 364 aaKnown RBP27.95■■■□□ 2.06
HOMER3-207ENST00000594794 GBF1Q92538 1859 aa27.95■■■□□ 2.06
HOMER3-207ENST00000594794 TANC1Q9C0D5 1861 aa27.95■■■□□ 2.06
HOMER3-207ENST00000594794 hCG_1642624A0A1W2PR95 340 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms