RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 SH3RF1Q7Z6J0 888 aa19.99■□□□□ 0.79
IRF3-208ENST00000594387 TRIM43Q96BQ3 446 aaPredicted RBP19.99■□□□□ 0.79
IRF3-208ENST00000594387 PSTPIP2Q9H939 334 aa19.99■□□□□ 0.79
IRF3-208ENST00000594387 STAM2O75886 525 aa19.98■□□□□ 0.79
IRF3-208ENST00000594387 SLC34A2O95436 690 aa19.98■□□□□ 0.79
IRF3-208ENST00000594387 CASTP20810 708 aaKnown RBP19.98■□□□□ 0.79
IRF3-208ENST00000594387 PTGS1P23219 599 aa19.98■□□□□ 0.79
IRF3-208ENST00000594387 LAMC2Q13753 1193 aa19.98■□□□□ 0.79
IRF3-208ENST00000594387 COL9A3Q14050 684 aaPredicted RBP19.98■□□□□ 0.79
IRF3-208ENST00000594387 HEATR3Q7Z4Q2 680 aa19.98■□□□□ 0.79
IRF3-208ENST00000594387 VSIG10LQ86VR7 867 aa19.98■□□□□ 0.79
IRF3-208ENST00000594387 DHX37Q8IY37 1157 aaKnown RBP19.98■□□□□ 0.79
IRF3-208ENST00000594387 COPS5Q92905 334 aa19.98■□□□□ 0.79
IRF3-208ENST00000594387 BRPF3Q9ULD4 1205 aa19.98■□□□□ 0.79
IRF3-208ENST00000594387 A6NJR5 290 aa19.97■□□□□ 0.79
IRF3-208ENST00000594387 SUPT20HL2P0C7V6 817 aa19.97■□□□□ 0.79
IRF3-208ENST00000594387 TGFB3P10600 412 aa19.97■□□□□ 0.79
IRF3-208ENST00000594387 METAP2P50579 478 aaKnown RBP eCLIP19.97■□□□□ 0.79
IRF3-208ENST00000594387 PURAQ00577 322 aaKnown RBP19.97■□□□□ 0.79
IRF3-208ENST00000594387 CCDC62Q6P9F0 684 aa19.97■□□□□ 0.79
IRF3-208ENST00000594387 BRF1Q92994 677 aa19.97■□□□□ 0.79
IRF3-208ENST00000594387 EHMT1Q9H9B1 1298 aa19.97■□□□□ 0.79
IRF3-208ENST00000594387 DDX41Q9UJV9 622 aaKnown RBP19.97■□□□□ 0.79
IRF3-208ENST00000594387 SPDYE3A6NKU9 549 aa19.96■□□□□ 0.79
IRF3-208ENST00000594387 PIK3CDO00329 1044 aa19.96■□□□□ 0.79
IRF3-208ENST00000594387 ARIH2O95376 493 aa19.96■□□□□ 0.79
IRF3-208ENST00000594387 TIMP1P01033 207 aa19.96■□□□□ 0.79
IRF3-208ENST00000594387 CPA1P15085 419 aa19.96■□□□□ 0.79
IRF3-208ENST00000594387 RPS6KB1P23443 525 aa19.96■□□□□ 0.79
IRF3-208ENST00000594387 CHMP4BP1P59074 171 aa19.96■□□□□ 0.79
IRF3-208ENST00000594387 PSMC6P62333 389 aa19.96■□□□□ 0.79
IRF3-208ENST00000594387 FPGSQ05932 587 aa19.96■□□□□ 0.79
IRF3-208ENST00000594387 APOBRQ0VD83 1088 aa19.96■□□□□ 0.79
IRF3-208ENST00000594387 DGKDQ16760 1214 aa19.96■□□□□ 0.79
IRF3-208ENST00000594387 FAM47CQ5HY64 1035 aa19.96■□□□□ 0.79
IRF3-208ENST00000594387 USP17L6PQ6QN14 398 aa19.96■□□□□ 0.79
IRF3-208ENST00000594387 FAM126BQ8IXS8 530 aa19.96■□□□□ 0.79
IRF3-208ENST00000594387 TMEM199Q8N511 208 aa19.96■□□□□ 0.79
IRF3-208ENST00000594387 CYP46A1Q9Y6A2 500 aa19.96■□□□□ 0.79
IRF3-208ENST00000594387 SCN10AQ9Y5Y9 1956 aa19.95■□□□□ 0.78
IRF3-208ENST00000594387 DOCK5Q9H7D0 1870 aa19.95■□□□□ 0.78
IRF3-208ENST00000594387 hCG_1642624A0A1W2PR95 340 aa19.95■□□□□ 0.78
IRF3-208ENST00000594387 hCG_1984214I3L0E3 225 aa19.95■□□□□ 0.78
IRF3-208ENST00000594387 NAPAP54920 295 aa19.95■□□□□ 0.78
IRF3-208ENST00000594387 AKAP17AQ02040 695 aaKnown RBP19.95■□□□□ 0.78
IRF3-208ENST00000594387 LRIT3Q3SXY7 679 aa19.95■□□□□ 0.78
IRF3-208ENST00000594387 XRRA1Q6P2D8 792 aa19.95■□□□□ 0.78
IRF3-208ENST00000594387 ZNF713Q8N859 430 aaPredicted RBP19.95■□□□□ 0.78
IRF3-208ENST00000594387 SLC43A3Q8NBI5 491 aa19.95■□□□□ 0.78
IRF3-208ENST00000594387 AFG1LQ8WV93 481 aa19.95■□□□□ 0.78
IRF3-208ENST00000594387 USP26Q9BXU7 913 aa19.95■□□□□ 0.78
IRF3-208ENST00000594387 GLT8D2Q9H1C3 349 aa19.95■□□□□ 0.78
IRF3-208ENST00000594387 MLXIPQ9HAP2 919 aa19.95■□□□□ 0.78
IRF3-208ENST00000594387 V9GY48 417 aaPredicted RBP19.95■□□□□ 0.78
IRF3-208ENST00000594387 KAT6AQ92794 2004 aa19.95■□□□□ 0.78
IRF3-208ENST00000594387 MMP3P08254 477 aa19.94■□□□□ 0.78
IRF3-208ENST00000594387 ARHGAP1Q07960 439 aa19.94■□□□□ 0.78
IRF3-208ENST00000594387 PPIGQ13427 754 aaKnown RBP eCLIP19.94■□□□□ 0.783e-8■■■□□ 16.4
IRF3-208ENST00000594387 RUFY3Q7L099 469 aa19.94■□□□□ 0.78
IRF3-208ENST00000594387 NLRX1Q86UT6 975 aa19.94■□□□□ 0.78
IRF3-208ENST00000594387 MEIS2O14770 477 aa19.93■□□□□ 0.78
IRF3-208ENST00000594387 CD4P01730 458 aa19.93■□□□□ 0.78
IRF3-208ENST00000594387 PTPN11Q06124 597 aaPredicted RBP19.93■□□□□ 0.78
IRF3-208ENST00000594387 MFSD5Q6N075 450 aa19.93■□□□□ 0.78
IRF3-208ENST00000594387 NFRKBQ6P4R8 1299 aa19.93■□□□□ 0.78
IRF3-208ENST00000594387 TEX2Q8IWB9 1127 aa19.93■□□□□ 0.78
IRF3-208ENST00000594387 FBXL16Q8N461 479 aa19.93■□□□□ 0.78
IRF3-208ENST00000594387 GPKOWQ92917 476 aaPredicted RBP eCLIP19.93■□□□□ 0.78
IRF3-208ENST00000594387 EMID1Q96A84 441 aaPredicted RBP19.93■□□□□ 0.78
IRF3-208ENST00000594387 KATNAL1Q9BW62 490 aa19.93■□□□□ 0.78
IRF3-208ENST00000594387 PPP1R12CQ9BZL4 782 aa19.93■□□□□ 0.78
IRF3-208ENST00000594387 RTEL1Q9NZ71 1219 aa19.93■□□□□ 0.78
IRF3-208ENST00000594387 TBX21Q9UL17 535 aa19.93■□□□□ 0.78
IRF3-208ENST00000594387 NOD1Q9Y239 953 aa19.93■□□□□ 0.78
IRF3-208ENST00000594387 CNTNAP5Q8WYK1 1306 aa19.93■□□□□ 0.78
IRF3-208ENST00000594387 TRIP12Q14669 1992 aaPredicted RBP19.92■□□□□ 0.78
IRF3-208ENST00000594387 GGPS1O95749 300 aa19.92■□□□□ 0.78
IRF3-208ENST00000594387 NEDD9Q14511 834 aa19.92■□□□□ 0.78
IRF3-208ENST00000594387 NBPF20Q3BBV1 942 aa19.92■□□□□ 0.78
IRF3-208ENST00000594387 PCNX4Q63HM2 1172 aa19.92■□□□□ 0.78
IRF3-208ENST00000594387 PPP1R18Q6NYC8 613 aa19.92■□□□□ 0.78
IRF3-208ENST00000594387 IL31RAQ8NI17 732 aa19.92■□□□□ 0.78
IRF3-208ENST00000594387 PPTC7Q8NI37 304 aa19.92■□□□□ 0.78
IRF3-208ENST00000594387 ZFP91Q96JP5 570 aaPredicted RBP19.92■□□□□ 0.78
IRF3-208ENST00000594387 SPATA33Q96N06 139 aa19.92■□□□□ 0.78
IRF3-208ENST00000594387 ALDH8A1Q9H2A2 487 aaPredicted RBP19.92■□□□□ 0.78
IRF3-208ENST00000594387 HIPK3Q9H422 1215 aa19.92■□□□□ 0.78
IRF3-208ENST00000594387 PCDH10Q9P2E7 1040 aa19.92■□□□□ 0.78
IRF3-208ENST00000594387 NOP56O00567 594 aaKnown RBP19.91■□□□□ 0.78
IRF3-208ENST00000594387 FIBPO43427 364 aa19.91■□□□□ 0.78
IRF3-208ENST00000594387 PPFIA4O75335 1185 aa19.91■□□□□ 0.78
IRF3-208ENST00000594387 ADCY7P51828 1080 aa19.91■□□□□ 0.78
IRF3-208ENST00000594387 SHHQ15465 462 aa19.91■□□□□ 0.78
IRF3-208ENST00000594387 CELF3Q5SZQ8 465 aaKnown RBP19.91■□□□□ 0.78
IRF3-208ENST00000594387 GIMAP8Q8ND71 665 aaPredicted RBP19.91■□□□□ 0.78
IRF3-208ENST00000594387 CCDC12Q8WUD4 166 aaPredicted RBP19.91■□□□□ 0.78
IRF3-208ENST00000594387 CDHR1Q96JP9 859 aa19.91■□□□□ 0.78
IRF3-208ENST00000594387 TM6SF1Q9BZW5 370 aa19.91■□□□□ 0.78
IRF3-208ENST00000594387 TRPV6Q9H1D0 765 aa19.91■□□□□ 0.78
IRF3-208ENST00000594387 ZSWIM6Q9HCJ5 1215 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms