RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 ARNTL2Q8WYA1 636 aa20.42■□□□□ 0.86
RETREG3-212ENST00000593251 ZSCAN10Q96SZ4 725 aaPredicted RBP20.42■□□□□ 0.86
RETREG3-212ENST00000593251 RMDN3Q96TC7 470 aa20.42■□□□□ 0.86
RETREG3-212ENST00000593251 RAPGEFL1Q9UHV5 662 aa20.42■□□□□ 0.86
RETREG3-212ENST00000593251 NCOR1O75376 2440 aa20.42■□□□□ 0.86
RETREG3-212ENST00000593251 EIF2AK2P19525 551 aaKnown RBP20.41■□□□□ 0.86
RETREG3-212ENST00000593251 KCNQ1P51787 676 aa20.41■□□□□ 0.86
RETREG3-212ENST00000593251 GPNMBQ14956 572 aa20.41■□□□□ 0.86
RETREG3-212ENST00000593251 STXBP2Q15833 593 aa20.41■□□□□ 0.86
RETREG3-212ENST00000593251 ASPRV1Q53RT3 343 aa20.41■□□□□ 0.86
RETREG3-212ENST00000593251 FBXO11Q86XK2 927 aa20.41■□□□□ 0.86
RETREG3-212ENST00000593251 SMC5Q8IY18 1101 aa20.41■□□□□ 0.86
RETREG3-212ENST00000593251 PHOSPHO2Q8TCD6 241 aa20.41■□□□□ 0.86
RETREG3-212ENST00000593251 DHX38Q92620 1227 aaKnown RBP20.41■□□□□ 0.86
RETREG3-212ENST00000593251 JMJD4Q9H9V9 463 aa20.41■□□□□ 0.86
RETREG3-212ENST00000593251 DIAPH3Q9NSV4 1193 aa20.41■□□□□ 0.86
RETREG3-212ENST00000593251 ZSWIM5Q9P217 1185 aa20.41■□□□□ 0.86
RETREG3-212ENST00000593251 BDP1A6H8Y1 2624 aa20.4■□□□□ 0.86
RETREG3-212ENST00000593251 GTPBP6O43824 516 aaPredicted RBP20.4■□□□□ 0.86
RETREG3-212ENST00000593251 BMP1P13497 986 aa20.4■□□□□ 0.86
RETREG3-212ENST00000593251 CCDC178Q5BJE1 867 aa20.4■□□□□ 0.86
RETREG3-212ENST00000593251 ARHGEF16Q5VV41 709 aa20.4■□□□□ 0.86
RETREG3-212ENST00000593251 CHD1LQ86WJ1 897 aa20.4■□□□□ 0.86
RETREG3-212ENST00000593251 MCF2L2Q86YR7 1114 aa20.4■□□□□ 0.86
RETREG3-212ENST00000593251 CCDC155Q8N6L0 562 aa20.4■□□□□ 0.86
RETREG3-212ENST00000593251 AFAP1L1Q8TED9 768 aa20.4■□□□□ 0.86
RETREG3-212ENST00000593251 ANKS1AQ92625 1134 aa20.4■□□□□ 0.86
RETREG3-212ENST00000593251 ALG1Q9BT22 464 aa20.4■□□□□ 0.86
RETREG3-212ENST00000593251 KIF28PB7ZC32 967 aa20.39■□□□□ 0.85
RETREG3-212ENST00000593251 CFBP00751 764 aa20.39■□□□□ 0.85
RETREG3-212ENST00000593251 PARP1P09874 1014 aaKnown RBP20.39■□□□□ 0.85
RETREG3-212ENST00000593251 CASTP20810 708 aaKnown RBP20.39■□□□□ 0.85
RETREG3-212ENST00000593251 KCNJ6P48051 423 aa20.39■□□□□ 0.85
RETREG3-212ENST00000593251 CAGE1Q8TC20 777 aa20.39■□□□□ 0.85
RETREG3-212ENST00000593251 IWS1Q96ST2 819 aa20.39■□□□□ 0.85
RETREG3-212ENST00000593251 HDAC6Q9UBN7 1215 aa20.39■□□□□ 0.85
RETREG3-212ENST00000593251 DDX41Q9UJV9 622 aaKnown RBP20.39■□□□□ 0.85
RETREG3-212ENST00000593251 MRPL11Q9Y3B7 192 aaKnown RBP20.39■□□□□ 0.85
RETREG3-212ENST00000593251 LCHNA4D1U4 455 aa20.38■□□□□ 0.85
RETREG3-212ENST00000593251 TLL1O43897 1013 aa20.38■□□□□ 0.85
RETREG3-212ENST00000593251 SORBS3O60504 671 aa20.38■□□□□ 0.85
RETREG3-212ENST00000593251 BAIAP3O94812 1187 aa20.38■□□□□ 0.85
RETREG3-212ENST00000593251 IGHDP01880 384 aa20.38■□□□□ 0.85
RETREG3-212ENST00000593251 ZNF286BP0CG31 522 aa20.38■□□□□ 0.85
RETREG3-212ENST00000593251 SELPP16109 830 aa20.38■□□□□ 0.85
RETREG3-212ENST00000593251 POU3F3P20264 500 aaPredicted RBP20.38■□□□□ 0.85
RETREG3-212ENST00000593251 PSEN2P49810 448 aa20.38■□□□□ 0.85
RETREG3-212ENST00000593251 WDR5P61964 334 aaKnown RBP20.38■□□□□ 0.85
RETREG3-212ENST00000593251 DGKDQ16760 1214 aa20.38■□□□□ 0.85
RETREG3-212ENST00000593251 TCTN1Q2MV58 587 aa20.38■□□□□ 0.85
RETREG3-212ENST00000593251 LRRC8DQ7L1W4 858 aa20.38■□□□□ 0.85
RETREG3-212ENST00000593251 SESTD1Q86VW0 696 aa20.38■□□□□ 0.85
RETREG3-212ENST00000593251 STAG2Q8N3U4 1231 aa20.38■□□□□ 0.85
RETREG3-212ENST00000593251 RWDD1Q9H446 243 aaPredicted RBP20.38■□□□□ 0.85
RETREG3-212ENST00000593251 OSBPL3Q9H4L5 887 aa20.38■□□□□ 0.85
RETREG3-212ENST00000593251 PXMP2Q9NR77 195 aa20.38■□□□□ 0.85
RETREG3-212ENST00000593251 GTF2IRD1Q9UHL9 959 aa20.38■□□□□ 0.85
RETREG3-212ENST00000593251 DOCK5Q9H7D0 1870 aa20.38■□□□□ 0.85
RETREG3-212ENST00000593251 BAZ2BQ9UIF8 2168 aaKnown RBP20.38■□□□□ 0.85
RETREG3-212ENST00000593251 SIP14410 1827 aa20.37■□□□□ 0.85
RETREG3-212ENST00000593251 OPLAHO14841 1288 aa20.37■□□□□ 0.85
RETREG3-212ENST00000593251 NR3C2P08235 984 aa20.37■□□□□ 0.85
RETREG3-212ENST00000593251 DEFB103AP81534 67 aa20.37■□□□□ 0.85
RETREG3-212ENST00000593251 GRB10Q13322 594 aa20.37■□□□□ 0.85
RETREG3-212ENST00000593251 IMMTQ16891 758 aaKnown RBP20.37■□□□□ 0.85
RETREG3-212ENST00000593251 C7orf31Q8N865 590 aa20.37■□□□□ 0.85
RETREG3-212ENST00000593251 DSCC1Q9BVC3 393 aa20.37■□□□□ 0.85
RETREG3-212ENST00000593251 MAF1Q9H063 256 aa20.37■□□□□ 0.85
RETREG3-212ENST00000593251 MRVI1Q9Y6F6 885 aa20.37■□□□□ 0.85
RETREG3-212ENST00000593251 NBNO60934 754 aa20.36■□□□□ 0.85
RETREG3-212ENST00000593251 EIF3JO75822 258 aaKnown RBP20.36■□□□□ 0.85
RETREG3-212ENST00000593251 CKBP12277 381 aa20.36■□□□□ 0.85
RETREG3-212ENST00000593251 MYCLP12524 364 aaPredicted RBP20.36■□□□□ 0.85
RETREG3-212ENST00000593251 NUCB1Q02818 461 aa20.36■□□□□ 0.85
RETREG3-212ENST00000593251 AAK1Q2M2I8 961 aa20.36■□□□□ 0.85
RETREG3-212ENST00000593251 UBAC1Q9BSL1 405 aa20.36■□□□□ 0.85
RETREG3-212ENST00000593251 ZBED2Q9BTP6 218 aa20.36■□□□□ 0.85
RETREG3-212ENST00000593251 KRT23Q9C075 422 aa20.36■□□□□ 0.85
RETREG3-212ENST00000593251 PPP1R11O60927 126 aaPredicted RBP20.35■□□□□ 0.85
RETREG3-212ENST00000593251 NT5C2P49902 561 aa20.35■□□□□ 0.85
RETREG3-212ENST00000593251 HSD17B4P51659 736 aa20.35■□□□□ 0.85
RETREG3-212ENST00000593251 ZNF200P98182 395 aaPredicted RBP20.35■□□□□ 0.85
RETREG3-212ENST00000593251 MFSD10Q14728 455 aa20.35■□□□□ 0.85
RETREG3-212ENST00000593251 KIAA0753Q2KHM9 967 aa20.35■□□□□ 0.85
RETREG3-212ENST00000593251 IFIT1BQ5T764 474 aaKnown RBP20.35■□□□□ 0.85
RETREG3-212ENST00000593251 CNKSR3Q6P9H4 555 aa20.35■□□□□ 0.85
RETREG3-212ENST00000593251 DHX37Q8IY37 1157 aaKnown RBP20.35■□□□□ 0.85
RETREG3-212ENST00000593251 WNT8BQ93098 351 aa20.35■□□□□ 0.85
RETREG3-212ENST00000593251 ZFP91Q96JP5 570 aaPredicted RBP20.35■□□□□ 0.85
RETREG3-212ENST00000593251 AMNQ9BXJ7 453 aa20.35■□□□□ 0.85
RETREG3-212ENST00000593251 IL25Q9H293 177 aa20.35■□□□□ 0.85
RETREG3-212ENST00000593251 MICAL3Q7RTP6 2002 aa20.35■□□□□ 0.85
RETREG3-212ENST00000593251 HIP1O00291 1037 aa20.34■□□□□ 0.85
RETREG3-212ENST00000593251 LPXNO60711 386 aa20.34■□□□□ 0.85
RETREG3-212ENST00000593251 RGS20O76081 388 aa20.34■□□□□ 0.85
RETREG3-212ENST00000593251 HOXA13P31271 388 aaPredicted RBP20.34■□□□□ 0.85
RETREG3-212ENST00000593251 RBL2Q08999 1139 aa20.34■□□□□ 0.85
RETREG3-212ENST00000593251 LAMC2Q13753 1193 aa20.34■□□□□ 0.85
RETREG3-212ENST00000593251 CYB5R4Q7L1T6 521 aa20.34■□□□□ 0.85
RETREG3-212ENST00000593251 PPTC7Q8NI37 304 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms