RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 ALG1Q9BT22 464 aa7.17□□□□□ -1.26
SMAD4-216ENST00000593223 AP5M1Q9H0R1 490 aa7.17□□□□□ -1.26
SMAD4-216ENST00000593223 KANSL2Q9H9L4 492 aa7.17□□□□□ -1.26
SMAD4-216ENST00000593223 NDOR1Q9UHB4 597 aa7.17□□□□□ -1.26
SMAD4-216ENST00000593223 MRPL42Q9Y6G3 142 aaKnown RBP7.17□□□□□ -1.26
SMAD4-216ENST00000593223 ASXL2Q76L83 1435 aa7.17□□□□□ -1.26
SMAD4-216ENST00000593223 VIPR1P32241 457 aa7.16□□□□□ -1.26
SMAD4-216ENST00000593223 MAPKAPK2P49137 400 aa7.16□□□□□ -1.26
SMAD4-216ENST00000593223 YBX1P67809 324 aaKnown RBP7.16□□□□□ -1.26
SMAD4-216ENST00000593223 SQSTM1Q13501 440 aa7.16□□□□□ -1.26
SMAD4-216ENST00000593223 KIZQ2M2Z5 673 aa7.16□□□□□ -1.26
SMAD4-216ENST00000593223 PLEKHN1Q494U1 663 aaPredicted RBP7.16□□□□□ -1.26
SMAD4-216ENST00000593223 MROH9Q5TGP6 573 aa7.16□□□□□ -1.26
SMAD4-216ENST00000593223 SYDE1Q6ZW31 735 aaPredicted RBP7.16□□□□□ -1.26
SMAD4-216ENST00000593223 DCP2Q8IU60 420 aaKnown RBP7.16□□□□□ -1.26
SMAD4-216ENST00000593223 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.16□□□□□ -1.26
SMAD4-216ENST00000593223 PEX11GQ96HA9 241 aa7.16□□□□□ -1.26
SMAD4-216ENST00000593223 FAM84AQ96KN4 292 aa7.16□□□□□ -1.26
SMAD4-216ENST00000593223 MCOLN1Q9GZU1 580 aa7.16□□□□□ -1.26
SMAD4-216ENST00000593223 SFMBT1Q9UHJ3 866 aa7.16□□□□□ -1.26
SMAD4-216ENST00000593223 ESYT3A0FGR9 886 aa7.15□□□□□ -1.26
SMAD4-216ENST00000593223 HRKO00198 91 aa7.15□□□□□ -1.26
SMAD4-216ENST00000593223 PEX10O60683 326 aa7.15□□□□□ -1.26
SMAD4-216ENST00000593223 EIF5BO60841 1220 aaKnown RBP7.15□□□□□ -1.26
SMAD4-216ENST00000593223 DGKIO75912 1065 aa7.15□□□□□ -1.26
SMAD4-216ENST00000593223 C6orf222P0C671 652 aaPredicted RBP7.15□□□□□ -1.26
SMAD4-216ENST00000593223 TXKP42681 527 aa7.15□□□□□ -1.26
SMAD4-216ENST00000593223 PRR5P85299 388 aa7.15□□□□□ -1.26
SMAD4-216ENST00000593223 GUCY1A3Q02108 690 aa7.15□□□□□ -1.26
SMAD4-216ENST00000593223 CBX2Q14781 532 aaPredicted RBP7.15□□□□□ -1.26
SMAD4-216ENST00000593223 ZNF648Q5T619 568 aaPredicted RBP7.15□□□□□ -1.26
SMAD4-216ENST00000593223 CYB5RLQ6IPT4 315 aa7.15□□□□□ -1.26
SMAD4-216ENST00000593223 HOMER1Q86YM7 354 aa7.15□□□□□ -1.26
SMAD4-216ENST00000593223 PPARGC1AQ9UBK2 798 aaKnown RBP7.15□□□□□ -1.26
SMAD4-216ENST00000593223 SIT1Q9Y3P8 196 aa7.15□□□□□ -1.26
SMAD4-216ENST00000593223 X6R8D5 127 aa7.15□□□□□ -1.26
SMAD4-216ENST00000593223 EFCAB14O75071 495 aa7.14□□□□□ -1.27
SMAD4-216ENST00000593223 SOD2P04179 222 aa7.14□□□□□ -1.27
SMAD4-216ENST00000593223 TMEM253P0C7T8 217 aa7.14□□□□□ -1.27
SMAD4-216ENST00000593223 NAT1P18440 290 aa7.14□□□□□ -1.27
SMAD4-216ENST00000593223 GRK2P25098 689 aa7.14□□□□□ -1.27
SMAD4-216ENST00000593223 GRK3P35626 688 aa7.14□□□□□ -1.27
SMAD4-216ENST00000593223 PKN1Q16512 942 aa7.14□□□□□ -1.27
SMAD4-216ENST00000593223 JAZF1Q86VZ6 243 aa7.14□□□□□ -1.27
SMAD4-216ENST00000593223 RIOX2Q8IUF8 465 aa7.14□□□□□ -1.27
SMAD4-216ENST00000593223 ARID1BQ8NFD5 2236 aaPredicted RBP7.14□□□□□ -1.27
SMAD4-216ENST00000593223 FMNL2Q96PY5 1086 aa7.14□□□□□ -1.27
SMAD4-216ENST00000593223 KCNJ15Q99712 375 aa7.14□□□□□ -1.27
SMAD4-216ENST00000593223 JAM3Q9BX67 310 aa7.14□□□□□ -1.27
SMAD4-216ENST00000593223 MRPL4Q9BYD3 311 aaKnown RBP7.14□□□□□ -1.27
SMAD4-216ENST00000593223 EPB41L1Q9H4G0 881 aa7.14□□□□□ -1.27
SMAD4-216ENST00000593223 SLC52A2Q9HAB3 445 aa7.14□□□□□ -1.27
SMAD4-216ENST00000593223 NCOA5Q9HCD5 579 aaKnown RBP7.14□□□□□ -1.27
SMAD4-216ENST00000593223 FANCLQ9NW38 375 aa7.14□□□□□ -1.27
SMAD4-216ENST00000593223 TMEM260Q9NX78 707 aa7.14□□□□□ -1.27
SMAD4-216ENST00000593223 PCDHA8Q9Y5H6 950 aa7.14□□□□□ -1.27
SMAD4-216ENST00000593223 HCFC2Q9Y5Z7 792 aa7.14□□□□□ -1.27
SMAD4-216ENST00000593223 TEX51A0A1B0GUA7 166 aa7.13□□□□□ -1.27
SMAD4-216ENST00000593223 MYOCOSA0A1B0GUC4 107 aa7.13□□□□□ -1.27
SMAD4-216ENST00000593223 FAM47E-STBD1D6RA91 191 aa7.13□□□□□ -1.27
SMAD4-216ENST00000593223 SEMA7AO75326 666 aa7.13□□□□□ -1.27
SMAD4-216ENST00000593223 ZBTB7AO95365 584 aa7.13□□□□□ -1.27
SMAD4-216ENST00000593223 ASMTLO95671 621 aa7.13□□□□□ -1.27
SMAD4-216ENST00000593223 ZNF200P98182 395 aaPredicted RBP7.13□□□□□ -1.27
SMAD4-216ENST00000593223 PAK1Q13153 545 aa7.13□□□□□ -1.27
SMAD4-216ENST00000593223 CHRNA2Q15822 529 aa7.13□□□□□ -1.27
SMAD4-216ENST00000593223 Q8N1Y9 231 aa7.13□□□□□ -1.27
SMAD4-216ENST00000593223 SEC14L1Q92503 715 aa7.13□□□□□ -1.27
SMAD4-216ENST00000593223 APPBP2Q92624 585 aa7.13□□□□□ -1.27
SMAD4-216ENST00000593223 ALG3Q92685 438 aa7.13□□□□□ -1.27
SMAD4-216ENST00000593223 MAGEB10Q96LZ2 347 aaPredicted RBP7.13□□□□□ -1.27
SMAD4-216ENST00000593223 PPP1R16BQ96T49 567 aa7.13□□□□□ -1.27
SMAD4-216ENST00000593223 SGPP1Q9BX95 441 aa7.13□□□□□ -1.27
SMAD4-216ENST00000593223 PCDHA9Q9Y5H5 950 aa7.13□□□□□ -1.27
SMAD4-216ENST00000593223 NESP48681 1621 aa7.12□□□□□ -1.27
SMAD4-216ENST00000593223 KRIT1O00522 736 aa7.12□□□□□ -1.27
SMAD4-216ENST00000593223 NFIBO00712 420 aa7.12□□□□□ -1.27
SMAD4-216ENST00000593223 PLD2O14939 933 aa7.12□□□□□ -1.27
SMAD4-216ENST00000593223 PPP1R12AO14974 1030 aaPredicted RBP7.12□□□□□ -1.27
SMAD4-216ENST00000593223 RAPGEF3O95398 923 aa7.12□□□□□ -1.27
SMAD4-216ENST00000593223 CRTAMO95727 393 aa7.12□□□□□ -1.27
SMAD4-216ENST00000593223 MESP2Q0VG99 397 aa7.12□□□□□ -1.27
SMAD4-216ENST00000593223 SLC9A5Q14940 896 aa7.12□□□□□ -1.27
SMAD4-216ENST00000593223 STEAP3Q658P3 488 aa7.12□□□□□ -1.27
SMAD4-216ENST00000593223 MILR1Q7Z6M3 343 aa7.12□□□□□ -1.27
SMAD4-216ENST00000593223 ZC3H7AQ8IWR0 971 aaKnown RBP7.12□□□□□ -1.27
SMAD4-216ENST00000593223 POU5F2Q8N7G0 328 aa7.12□□□□□ -1.27
SMAD4-216ENST00000593223 IPPKQ9H8X2 491 aa7.12□□□□□ -1.27
SMAD4-216ENST00000593223 TMA7Q9Y2S6 64 aaKnown RBP7.12□□□□□ -1.27
SMAD4-216ENST00000593223 THOC2Q8NI27 1593 aaKnown RBP7.12□□□□□ -1.27
SMAD4-216ENST00000593223 ETV2O00321 342 aaPredicted RBP7.11□□□□□ -1.27
SMAD4-216ENST00000593223 CDC45O75419 566 aa7.11□□□□□ -1.27
SMAD4-216ENST00000593223 SRGAP2CP0DJJ0 459 aa7.11□□□□□ -1.27
SMAD4-216ENST00000593223 GNAT1P11488 350 aa7.11□□□□□ -1.27
SMAD4-216ENST00000593223 SLC6A11P48066 632 aa7.11□□□□□ -1.27
SMAD4-216ENST00000593223 DLG4P78352 724 aa7.11□□□□□ -1.27
SMAD4-216ENST00000593223 SPIRE1Q08AE8 756 aa7.11□□□□□ -1.27
SMAD4-216ENST00000593223 TCEA2Q15560 299 aa7.11□□□□□ -1.27
SMAD4-216ENST00000593223 GIMAP6Q6P9H5 292 aa7.11□□□□□ -1.27
SMAD4-216ENST00000593223 BRAPQ7Z569 592 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms