RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 LAMA3Q16787 3333 aa15.28■□□□□ 0.04
VMP1-217ENST00000593168 FAM237AA0A1B0GTK4 181 aa15.28■□□□□ 0.04
VMP1-217ENST00000593168 A0A1W2PPC1 479 aa15.28■□□□□ 0.04
VMP1-217ENST00000593168 SPDYE3A6NKU9 549 aa15.28■□□□□ 0.04
VMP1-217ENST00000593168 SPDYE16A6NNV3 312 aaPredicted RBP15.28■□□□□ 0.04
VMP1-217ENST00000593168 DLL1O00548 723 aa15.28■□□□□ 0.04
VMP1-217ENST00000593168 TNPO2O14787 897 aaKnown RBP15.28■□□□□ 0.04
VMP1-217ENST00000593168 EDIL3O43854 480 aa15.28■□□□□ 0.04
VMP1-217ENST00000593168 TFRCP02786 760 aaKnown RBP15.28■□□□□ 0.04
VMP1-217ENST00000593168 TAL1P17542 331 aaPredicted RBP15.28■□□□□ 0.04
VMP1-217ENST00000593168 LIG1P18858 919 aa15.28■□□□□ 0.04
VMP1-217ENST00000593168 PABPC4Q13310 644 aaKnown RBP eCLIP15.28■□□□□ 0.04
VMP1-217ENST00000593168 LETM2Q2VYF4 491 aa15.28■□□□□ 0.04
VMP1-217ENST00000593168 TKFCQ3LXA3 575 aa15.28■□□□□ 0.04
VMP1-217ENST00000593168 PPP4R3AQ6IN85 833 aa15.28■□□□□ 0.04
VMP1-217ENST00000593168 MOXD1Q6UVY6 613 aa15.28■□□□□ 0.04
VMP1-217ENST00000593168 LBX2Q6XYB7 198 aa15.28■□□□□ 0.04
VMP1-217ENST00000593168 CCDC73Q6ZRK6 1079 aa15.28■□□□□ 0.04
VMP1-217ENST00000593168 FSIP1Q8NA03 581 aa15.28■□□□□ 0.04
VMP1-217ENST00000593168 PXYLP1Q8TE99 480 aa15.28■□□□□ 0.04
VMP1-217ENST00000593168 CRYGNQ8WXF5 182 aa15.28■□□□□ 0.04
VMP1-217ENST00000593168 CLEC4DQ8WXI8 215 aa15.28■□□□□ 0.04
VMP1-217ENST00000593168 DEFB118Q96PH6 123 aa15.28■□□□□ 0.04
VMP1-217ENST00000593168 PAK6Q9NQU5 681 aaPredicted RBP15.28■□□□□ 0.04
VMP1-217ENST00000593168 TMEM63CQ9P1W3 806 aa15.28■□□□□ 0.04
VMP1-217ENST00000593168 SLC45A1Q9Y2W3 748 aa15.28■□□□□ 0.04
VMP1-217ENST00000593168 CCNT1O60563 726 aaKnown RBP15.27■□□□□ 0.04
VMP1-217ENST00000593168 CFBP00751 764 aa15.27■□□□□ 0.04
VMP1-217ENST00000593168 ALAS1P13196 640 aa15.27■□□□□ 0.04
VMP1-217ENST00000593168 GCFC2P16383 781 aaKnown RBP15.27■□□□□ 0.04
VMP1-217ENST00000593168 PRPHP41219 470 aa15.27■□□□□ 0.04
VMP1-217ENST00000593168 HSD17B4P51659 736 aa15.27■□□□□ 0.04
VMP1-217ENST00000593168 FAM160A1Q05DH4 1040 aa15.27■□□□□ 0.04
VMP1-217ENST00000593168 IRF5Q13568 498 aa15.27■□□□□ 0.04
VMP1-217ENST00000593168 TPRNQ4KMQ1 711 aa15.27■□□□□ 0.04
VMP1-217ENST00000593168 CCDC183Q5T5S1 534 aa15.27■□□□□ 0.04
VMP1-217ENST00000593168 RESP18Q5W5W9 173 aa15.27■□□□□ 0.04
VMP1-217ENST00000593168 SHC4Q6S5L8 630 aa15.27■□□□□ 0.04
VMP1-217ENST00000593168 MB21D1Q8N884 522 aa15.27■□□□□ 0.04
VMP1-217ENST00000593168 ENGASEQ8NFI3 743 aa15.27■□□□□ 0.04
VMP1-217ENST00000593168 TBC1D5Q92609 795 aa15.27■□□□□ 0.04
VMP1-217ENST00000593168 PAWRQ96IZ0 340 aaKnown RBP15.27■□□□□ 0.04
VMP1-217ENST00000593168 CLIC6Q96NY7 704 aa15.27■□□□□ 0.04
VMP1-217ENST00000593168 P2RX7Q99572 595 aaKnown RBP15.27■□□□□ 0.04
VMP1-217ENST00000593168 DDX19AQ9NUU7 478 aaKnown RBP15.27■□□□□ 0.04
VMP1-217ENST00000593168 ZNF214Q9UL59 606 aaPredicted RBP15.27■□□□□ 0.04
VMP1-217ENST00000593168 CYP3A7-CYP3A51PA0A087WV96 503 aa15.26■□□□□ 0.03
VMP1-217ENST00000593168 NEMFO60524 1076 aa15.26■□□□□ 0.03
VMP1-217ENST00000593168 CYP3A4P08684 503 aa15.26■□□□□ 0.03
VMP1-217ENST00000593168 CYP3A7P24462 503 aa15.26■□□□□ 0.03
VMP1-217ENST00000593168 HOXA13P31271 388 aaPredicted RBP15.26■□□□□ 0.03
VMP1-217ENST00000593168 SREBF1P36956 1147 aa15.26■□□□□ 0.03
VMP1-217ENST00000593168 IRX3P78415 501 aaPredicted RBP15.26■□□□□ 0.03
VMP1-217ENST00000593168 TMEM132BQ14DG7 1078 aa15.26■□□□□ 0.03
VMP1-217ENST00000593168 DIS3LQ8TF46 1054 aaKnown RBP15.26■□□□□ 0.03
VMP1-217ENST00000593168 TRERF1Q96PN7 1200 aa15.26■□□□□ 0.03
VMP1-217ENST00000593168 TEX13BQ9BXU2 312 aa15.26■□□□□ 0.03
VMP1-217ENST00000593168 CRISPLD2Q9H0B8 497 aa15.26■□□□□ 0.03
VMP1-217ENST00000593168 EHMT1Q9H9B1 1298 aa15.26■□□□□ 0.03
VMP1-217ENST00000593168 DACT1Q9NYF0 836 aa15.26■□□□□ 0.03
VMP1-217ENST00000593168 MRVI1Q9Y6F6 885 aa15.26■□□□□ 0.03
VMP1-217ENST00000593168 PLXNB2O15031 1838 aa15.26■□□□□ 0.03
VMP1-217ENST00000593168 A0A1B0GVL5 298 aa15.25■□□□□ 0.03
VMP1-217ENST00000593168 NFIBO00712 420 aa15.25■□□□□ 0.03
VMP1-217ENST00000593168 NR1I2O75469 434 aa15.25■□□□□ 0.03
VMP1-217ENST00000593168 LETM1O95202 739 aaPredicted RBP15.25■□□□□ 0.03
VMP1-217ENST00000593168 CIITAP33076 1130 aa15.25■□□□□ 0.03
VMP1-217ENST00000593168 STAT3P40763 770 aa15.25■□□□□ 0.03
VMP1-217ENST00000593168 ARHGAP4P98171 946 aa15.25■□□□□ 0.03
VMP1-217ENST00000593168 SNW1Q13573 536 aaKnown RBP15.25■□□□□ 0.03
VMP1-217ENST00000593168 FMR1NBQ8N0W7 255 aaPredicted RBP15.25■□□□□ 0.03
VMP1-217ENST00000593168 ANKRD13CQ8N6S4 541 aa15.25■□□□□ 0.03
VMP1-217ENST00000593168 SMCR8Q8TEV9 937 aaPredicted RBP15.25■□□□□ 0.03
VMP1-217ENST00000593168 MBOAT7Q96N66 472 aa15.25■□□□□ 0.03
VMP1-217ENST00000593168 GZF1Q9H116 711 aaPredicted RBP15.25■□□□□ 0.03
VMP1-217ENST00000593168 ASCC2Q9H1I8 757 aaPredicted RBP15.25■□□□□ 0.03
VMP1-217ENST00000593168 TMEM60Q9H2L4 133 aa15.25■□□□□ 0.03
VMP1-217ENST00000593168 GOLPH3LQ9H4A5 285 aa15.25■□□□□ 0.03
VMP1-217ENST00000593168 RNF146Q9NTX7 359 aa15.25■□□□□ 0.03
VMP1-217ENST00000593168 FAM13BQ9NYF5 915 aa15.25■□□□□ 0.03
VMP1-217ENST00000593168 HPSEQ9Y251 543 aa15.25■□□□□ 0.03
VMP1-217ENST00000593168 RABGAP1Q9Y3P9 1069 aa15.25■□□□□ 0.03
VMP1-217ENST00000593168 MYH7BA7E2Y1 1941 aa15.24■□□□□ 0.03
VMP1-217ENST00000593168 OR52Z1P0C646 297 aa15.24■□□□□ 0.03
VMP1-217ENST00000593168 PFKFB1P16118 471 aa15.24■□□□□ 0.03
VMP1-217ENST00000593168 CAPN2P17655 700 aa15.24■□□□□ 0.03
VMP1-217ENST00000593168 LONP1P36776 959 aaKnown RBP15.24■□□□□ 0.03
VMP1-217ENST00000593168 NDUFA8P51970 172 aa15.24■□□□□ 0.03
VMP1-217ENST00000593168 GRIN1Q05586 938 aa15.24■□□□□ 0.03
VMP1-217ENST00000593168 ZSCAN23Q3MJ62 389 aa15.24■□□□□ 0.03
VMP1-217ENST00000593168 MUM1L1Q5H9M0 696 aa15.24■□□□□ 0.03
VMP1-217ENST00000593168 SNRNP48Q6IEG0 339 aaKnown RBP15.24■□□□□ 0.03
VMP1-217ENST00000593168 DTHD1Q6ZMT9 781 aa15.24■□□□□ 0.03
VMP1-217ENST00000593168 FCHSD1Q86WN1 690 aa15.24■□□□□ 0.03
VMP1-217ENST00000593168 MTMR9Q96QG7 549 aa15.24■□□□□ 0.03
VMP1-217ENST00000593168 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.24■□□□□ 0.03
VMP1-217ENST00000593168 CSRNP2Q9H175 543 aa15.24■□□□□ 0.03
VMP1-217ENST00000593168 RIPK3Q9Y572 518 aa15.24■□□□□ 0.03
VMP1-217ENST00000593168 COL11A1P12107 1806 aaPredicted RBP15.24■□□□□ 0.03
VMP1-217ENST00000593168 VWA3AA6NCI4 1184 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms