RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 KCNJ6P48051 423 aa13.12□□□□□ -0.31
PRKCSH-220ENST00000593104 PWP2Q15269 919 aaKnown RBP13.12□□□□□ -0.31
PRKCSH-220ENST00000593104 LRRC8DQ7L1W4 858 aa13.12□□□□□ -0.31
PRKCSH-220ENST00000593104 PNMA1Q8ND90 353 aa13.12□□□□□ -0.31
PRKCSH-220ENST00000593104 GPKOWQ92917 476 aaPredicted RBP eCLIP13.12□□□□□ -0.31
PRKCSH-220ENST00000593104 CD320Q9NPF0 282 aa13.12□□□□□ -0.31
PRKCSH-220ENST00000593104 ZMYM6O95789 1325 aa13.12□□□□□ -0.31
PRKCSH-220ENST00000593104 OPLAHO14841 1288 aa13.11□□□□□ -0.31
PRKCSH-220ENST00000593104 DHX16O60231 1041 aaKnown RBP13.11□□□□□ -0.31
PRKCSH-220ENST00000593104 CKBP12277 381 aa13.11□□□□□ -0.31
PRKCSH-220ENST00000593104 SELPP16109 830 aa13.11□□□□□ -0.31
PRKCSH-220ENST00000593104 POU3F3P20264 500 aaPredicted RBP13.11□□□□□ -0.31
PRKCSH-220ENST00000593104 PSEN2P49810 448 aa13.11□□□□□ -0.31
PRKCSH-220ENST00000593104 PTPN11Q06124 597 aaPredicted RBP13.11□□□□□ -0.31
PRKCSH-220ENST00000593104 MBTPS1Q14703 1052 aa13.11□□□□□ -0.31
PRKCSH-220ENST00000593104 TRAF7Q6Q0C0 670 aa13.11□□□□□ -0.31
PRKCSH-220ENST00000593104 CWC27Q6UX04 472 aaKnown RBP13.11□□□□□ -0.31
PRKCSH-220ENST00000593104 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.11□□□□□ -0.31
PRKCSH-220ENST00000593104 STAG2Q8N3U4 1231 aa13.11□□□□□ -0.31
PRKCSH-220ENST00000593104 IL31RAQ8NI17 732 aa13.11□□□□□ -0.31
PRKCSH-220ENST00000593104 PHOSPHO2Q8TCD6 241 aa13.11□□□□□ -0.31
PRKCSH-220ENST00000593104 ESR2Q92731 530 aa13.11□□□□□ -0.31
PRKCSH-220ENST00000593104 TTC14Q96N46 770 aa13.11□□□□□ -0.31
PRKCSH-220ENST00000593104 RMDN3Q96TC7 470 aa13.11□□□□□ -0.31
PRKCSH-220ENST00000593104 ZBED2Q9BTP6 218 aa13.11□□□□□ -0.31
PRKCSH-220ENST00000593104 OSBPL7Q9BZF2 842 aa13.11□□□□□ -0.31
PRKCSH-220ENST00000593104 IL25Q9H293 177 aa13.11□□□□□ -0.31
PRKCSH-220ENST00000593104 GTF2IRD1Q9UHL9 959 aa13.11□□□□□ -0.31
PRKCSH-220ENST00000593104 DDX41Q9UJV9 622 aaKnown RBP13.11□□□□□ -0.31
PRKCSH-220ENST00000593104 XIRP2A4UGR9 3374 aa13.1□□□□□ -0.31
PRKCSH-220ENST00000593104 KIF28PB7ZC32 967 aa13.1□□□□□ -0.31
PRKCSH-220ENST00000593104 KPNA6O60684 536 aa13.1□□□□□ -0.31
PRKCSH-220ENST00000593104 PPP1R11O60927 126 aaPredicted RBP13.1□□□□□ -0.31
PRKCSH-220ENST00000593104 RGS20O76081 388 aa13.1□□□□□ -0.31
PRKCSH-220ENST00000593104 CFBP00751 764 aa13.1□□□□□ -0.31
PRKCSH-220ENST00000593104 MYCLP12524 364 aaPredicted RBP13.1□□□□□ -0.31
PRKCSH-220ENST00000593104 HOXA13P31271 388 aaPredicted RBP13.1□□□□□ -0.31
PRKCSH-220ENST00000593104 MFSD10Q14728 455 aa13.1□□□□□ -0.31
PRKCSH-220ENST00000593104 TRIM71Q2Q1W2 868 aaKnown RBP13.1□□□□□ -0.31
PRKCSH-220ENST00000593104 GPATCH4Q5T3I0 446 aaKnown RBP13.1□□□□□ -0.31
PRKCSH-220ENST00000593104 ZNF618Q5T7W0 954 aa13.1□□□□□ -0.31
PRKCSH-220ENST00000593104 ARHGEF16Q5VV41 709 aa13.1□□□□□ -0.31
PRKCSH-220ENST00000593104 ENAHQ8N8S7 591 aaPredicted RBP13.1□□□□□ -0.31
PRKCSH-220ENST00000593104 AFAP1L1Q8TED9 768 aa13.1□□□□□ -0.31
PRKCSH-220ENST00000593104 MPHOSPH6Q99547 160 aaKnown RBP13.1□□□□□ -0.31
PRKCSH-220ENST00000593104 BCAS3Q9H6U6 928 aa13.1□□□□□ -0.31
PRKCSH-220ENST00000593104 KAT14Q9H8E8 782 aa13.1□□□□□ -0.31
PRKCSH-220ENST00000593104 JMJD4Q9H9V9 463 aa13.1□□□□□ -0.31
PRKCSH-220ENST00000593104 SUGCTQ9HAC7 445 aa13.1□□□□□ -0.31
PRKCSH-220ENST00000593104 DOCK5Q9H7D0 1870 aa13.1□□□□□ -0.31
PRKCSH-220ENST00000593104 ABCB11O95342 1321 aa13.1□□□□□ -0.31
PRKCSH-220ENST00000593104 SIP14410 1827 aa13.09□□□□□ -0.31
PRKCSH-220ENST00000593104 LINC01553A4QN01 128 aa13.09□□□□□ -0.31
PRKCSH-220ENST00000593104 ZNF213O14771 459 aa13.09□□□□□ -0.31
PRKCSH-220ENST00000593104 BAIAP3O94812 1187 aa13.09□□□□□ -0.31
PRKCSH-220ENST00000593104 PLA2G5P39877 138 aa13.09□□□□□ -0.31
PRKCSH-220ENST00000593104 STXBP2Q15833 593 aa13.09□□□□□ -0.31
PRKCSH-220ENST00000593104 KIAA0753Q2KHM9 967 aa13.09□□□□□ -0.31
PRKCSH-220ENST00000593104 SLC35G1Q2M3R5 365 aa13.09□□□□□ -0.31
PRKCSH-220ENST00000593104 SESTD1Q86VW0 696 aa13.09□□□□□ -0.31
PRKCSH-220ENST00000593104 DGKHQ86XP1 1220 aa13.09□□□□□ -0.31
PRKCSH-220ENST00000593104 CAGE1Q8TC20 777 aa13.09□□□□□ -0.31
PRKCSH-220ENST00000593104 NSUN6Q8TEA1 469 aaKnown RBP13.09□□□□□ -0.31
PRKCSH-220ENST00000593104 HLA-CQ95604 372 aa13.09□□□□□ -0.31
PRKCSH-220ENST00000593104 ZSCAN10Q96SZ4 725 aaPredicted RBP13.09□□□□□ -0.31
PRKCSH-220ENST00000593104 LRFN3Q9BTN0 628 aa13.09□□□□□ -0.31
PRKCSH-220ENST00000593104 C11orf16Q9NQ32 467 aa13.09□□□□□ -0.31
PRKCSH-220ENST00000593104 PXMP2Q9NR77 195 aa13.09□□□□□ -0.31
PRKCSH-220ENST00000593104 ZSWIM5Q9P217 1185 aa13.09□□□□□ -0.31
PRKCSH-220ENST00000593104 TELO2Q9Y4R8 837 aa13.09□□□□□ -0.31
PRKCSH-220ENST00000593104 MRVI1Q9Y6F6 885 aa13.09□□□□□ -0.31
PRKCSH-220ENST00000593104 CXCL10P02778 98 aa13.08□□□□□ -0.32
PRKCSH-220ENST00000593104 NR3C2P08235 984 aa13.08□□□□□ -0.32
PRKCSH-220ENST00000593104 CASTP20810 708 aaKnown RBP13.08□□□□□ -0.32
PRKCSH-220ENST00000593104 SP2Q02086 613 aa13.08□□□□□ -0.32
PRKCSH-220ENST00000593104 HDAC1Q13547 482 aaPredicted RBP13.08□□□□□ -0.32
PRKCSH-220ENST00000593104 DGKDQ16760 1214 aa13.08□□□□□ -0.32
PRKCSH-220ENST00000593104 AAK1Q2M2I8 961 aa13.08□□□□□ -0.32
PRKCSH-220ENST00000593104 HSDL1Q3SXM5 330 aa13.08□□□□□ -0.32
PRKCSH-220ENST00000593104 CNKSR3Q6P9H4 555 aa13.08□□□□□ -0.32
PRKCSH-220ENST00000593104 FBXO11Q86XK2 927 aa13.08□□□□□ -0.32
PRKCSH-220ENST00000593104 PLEKHM2Q8IWE5 1019 aa13.08□□□□□ -0.32
PRKCSH-220ENST00000593104 CCDC155Q8N6L0 562 aa13.08□□□□□ -0.32
PRKCSH-220ENST00000593104 C7orf31Q8N865 590 aa13.08□□□□□ -0.32
PRKCSH-220ENST00000593104 RGS22Q8NE09 1264 aa13.08□□□□□ -0.32
PRKCSH-220ENST00000593104 C17orf80Q9BSJ5 609 aa13.08□□□□□ -0.32
PRKCSH-220ENST00000593104 RNF41Q9H4P4 317 aaPredicted RBP13.08□□□□□ -0.32
PRKCSH-220ENST00000593104 MICAL3Q7RTP6 2002 aa13.08□□□□□ -0.32
PRKCSH-220ENST00000593104 BAZ2BQ9UIF8 2168 aaKnown RBP13.07□□□□□ -0.32
PRKCSH-220ENST00000593104 B4DLN1 442 aa13.07□□□□□ -0.32
PRKCSH-220ENST00000593104 HAS3O00219 553 aa13.07□□□□□ -0.32
PRKCSH-220ENST00000593104 GJB5O95377 273 aa13.07□□□□□ -0.32
PRKCSH-220ENST00000593104 F2P00734 622 aa13.07□□□□□ -0.32
PRKCSH-220ENST00000593104 IGHDP01880 384 aa13.07□□□□□ -0.32
PRKCSH-220ENST00000593104 PARP1P09874 1014 aaKnown RBP13.07□□□□□ -0.32
PRKCSH-220ENST00000593104 MRPL12P52815 198 aaKnown RBP13.07□□□□□ -0.32
PRKCSH-220ENST00000593104 CYB5R4Q7L1T6 521 aa13.07□□□□□ -0.32
PRKCSH-220ENST00000593104 IQCA1Q86XH1 822 aa13.07□□□□□ -0.32
PRKCSH-220ENST00000593104 FAM122AQ96E09 287 aa13.07□□□□□ -0.32
PRKCSH-220ENST00000593104 SENP2Q9HC62 589 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms