RNA–Protein interactions for RNA: ENST00000593025.1

RANBP3-230, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 551 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-230ENST00000593025 RAD50Q92878 1312 aa12.73□□□□□ -0.37
RANBP3-230ENST00000593025 KIAA1217Q5T5P2 1943 aa12.73□□□□□ -0.37
RANBP3-230ENST00000593025 M0R2C6 588 aa12.73□□□□□ -0.37
RANBP3-230ENST00000593025 MBTPS2O43462 519 aa12.73□□□□□ -0.37
RANBP3-230ENST00000593025 TXNP10599 105 aaKnown RBP12.73□□□□□ -0.37
RANBP3-230ENST00000593025 NOVP48745 357 aa12.73□□□□□ -0.37
RANBP3-230ENST00000593025 PTPN5P54829 565 aa12.73□□□□□ -0.37
RANBP3-230ENST00000593025 IKBKEQ14164 716 aa12.73□□□□□ -0.37
RANBP3-230ENST00000593025 CLUL1Q15846 466 aa12.73□□□□□ -0.37
RANBP3-230ENST00000593025 BRDTQ58F21 947 aaPredicted RBP12.73□□□□□ -0.37
RANBP3-230ENST00000593025 ZNF618Q5T7W0 954 aa12.73□□□□□ -0.37
RANBP3-230ENST00000593025 RPAINQ86UA6 219 aa12.73□□□□□ -0.37
RANBP3-230ENST00000593025 AFG1LQ8WV93 481 aa12.73□□□□□ -0.37
RANBP3-230ENST00000593025 OSBPL7Q9BZF2 842 aa12.73□□□□□ -0.37
RANBP3-230ENST00000593025 BCL11AQ9H165 835 aa12.73□□□□□ -0.37
RANBP3-230ENST00000593025 NSUN3Q9H649 340 aaKnown RBP12.73□□□□□ -0.37
RANBP3-230ENST00000593025 FAM86C1Q9NVL1 165 aa12.73□□□□□ -0.37
RANBP3-230ENST00000593025 CLDND1Q9NY35 253 aa12.73□□□□□ -0.37
RANBP3-230ENST00000593025 HDAC6Q9UBN7 1215 aa12.73□□□□□ -0.37
RANBP3-230ENST00000593025 ZNF292O60281 2723 aa12.72□□□□□ -0.37
RANBP3-230ENST00000593025 ZNF316A6NFI3 1004 aaPredicted RBP12.72□□□□□ -0.37
RANBP3-230ENST00000593025 GPAA1O43292 621 aa12.72□□□□□ -0.37
RANBP3-230ENST00000593025 GFRA3O60609 400 aa12.72□□□□□ -0.37
RANBP3-230ENST00000593025 EFCAB14O75071 495 aa12.72□□□□□ -0.37
RANBP3-230ENST00000593025 TBX10O75333 385 aa12.72□□□□□ -0.37
RANBP3-230ENST00000593025 PARNO95453 639 aaKnown RBP12.72□□□□□ -0.37
RANBP3-230ENST00000593025 TSPY3P0CV98 308 aa12.72□□□□□ -0.37
RANBP3-230ENST00000593025 TSPY8P0CW00 308 aa12.72□□□□□ -0.37
RANBP3-230ENST00000593025 CALML3P27482 149 aa12.72□□□□□ -0.37
RANBP3-230ENST00000593025 SLC16A2P36021 539 aa12.72□□□□□ -0.37
RANBP3-230ENST00000593025 GPM6BQ13491 265 aa12.72□□□□□ -0.37
RANBP3-230ENST00000593025 PTPROQ16827 1216 aa12.72□□□□□ -0.37
RANBP3-230ENST00000593025 ZSCAN25Q6NSZ9 544 aa12.72□□□□□ -0.37
RANBP3-230ENST00000593025 BTNL9Q6UXG8 535 aa12.72□□□□□ -0.37
RANBP3-230ENST00000593025 FBXO11Q86XK2 927 aa12.72□□□□□ -0.37
RANBP3-230ENST00000593025 FTSJ3Q8IY81 847 aaKnown RBP12.72□□□□□ -0.37
RANBP3-230ENST00000593025 INCENPQ9NQS7 918 aa12.72□□□□□ -0.37
RANBP3-230ENST00000593025 CTNNA3Q9UI47 895 aa12.72□□□□□ -0.37
RANBP3-230ENST00000593025 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.72□□□□□ -0.37
RANBP3-230ENST00000593025 PTPDC1A2A3K4 754 aa12.71□□□□□ -0.37
RANBP3-230ENST00000593025 TMEM221A6NGB7 291 aa12.71□□□□□ -0.37
RANBP3-230ENST00000593025 M0R296 226 aa12.71□□□□□ -0.37
RANBP3-230ENST00000593025 FOXP2O15409 715 aa12.71□□□□□ -0.37
RANBP3-230ENST00000593025 GTF2F1P35269 517 aaKnown RBP eCLIP12.71□□□□□ -0.37
RANBP3-230ENST00000593025 TDO2P48775 406 aa12.71□□□□□ -0.37
RANBP3-230ENST00000593025 RPS6P62753 249 aaKnown RBP12.71□□□□□ -0.37
RANBP3-230ENST00000593025 ZNF200P98182 395 aaPredicted RBP12.71□□□□□ -0.37
RANBP3-230ENST00000593025 PDE4DQ08499 809 aa12.71□□□□□ -0.37
RANBP3-230ENST00000593025 HYAL1Q12794 435 aa12.71□□□□□ -0.37
RANBP3-230ENST00000593025 PTK7Q13308 1070 aa12.71□□□□□ -0.37
RANBP3-230ENST00000593025 TRIM67Q6ZTA4 783 aa12.71□□□□□ -0.37
RANBP3-230ENST00000593025 EP400NLQ6ZTU2 488 aa12.71□□□□□ -0.37
RANBP3-230ENST00000593025 TMEM192Q8IY95 271 aa12.71□□□□□ -0.37
RANBP3-230ENST00000593025 IFNL3Q8IZI9 196 aa12.71□□□□□ -0.37
RANBP3-230ENST00000593025 MYOCDQ8IZQ8 938 aa12.71□□□□□ -0.37
RANBP3-230ENST00000593025 DBF4BQ8NFT6 615 aa12.71□□□□□ -0.37
RANBP3-230ENST00000593025 PANK1Q8TE04 598 aa12.71□□□□□ -0.37
RANBP3-230ENST00000593025 APPBP2Q92624 585 aa12.71□□□□□ -0.37
RANBP3-230ENST00000593025 CRBNQ96SW2 442 aa12.71□□□□□ -0.37
RANBP3-230ENST00000593025 UPF3BQ9BZI7 483 aaKnown RBP12.71□□□□□ -0.37
RANBP3-230ENST00000593025 FAM50BQ9Y247 325 aa12.71□□□□□ -0.37
RANBP3-230ENST00000593025 GVINP1Q7Z2Y8 2422 aa12.71□□□□□ -0.38
RANBP3-230ENST00000593025 RIF1Q5UIP0 2472 aaKnown RBP12.7□□□□□ -0.38
RANBP3-230ENST00000593025 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.7□□□□□ -0.38
RANBP3-230ENST00000593025 HAS3O00219 553 aa12.7□□□□□ -0.38
RANBP3-230ENST00000593025 LINC01565O15544 149 aa12.7□□□□□ -0.38
RANBP3-230ENST00000593025 VCPP55072 806 aaKnown RBP12.7□□□□□ -0.38
RANBP3-230ENST00000593025 LY6KQ17RY6 165 aa12.7□□□□□ -0.38
RANBP3-230ENST00000593025 RNF207Q6ZRF8 634 aa12.7□□□□□ -0.38
RANBP3-230ENST00000593025 SAMD11Q96NU1 681 aa12.7□□□□□ -0.38
RANBP3-230ENST00000593025 ZNF287Q9HBT7 754 aa12.7□□□□□ -0.38
RANBP3-230ENST00000593025 STX8Q9UNK0 236 aa12.7□□□□□ -0.38
RANBP3-230ENST00000593025 DMXL1Q9Y485 3027 aa12.7□□□□□ -0.38
RANBP3-230ENST00000593025 DNAH14Q0VDD8 3507 aa12.69□□□□□ -0.38
RANBP3-230ENST00000593025 GRM6O15303 877 aa12.69□□□□□ -0.38
RANBP3-230ENST00000593025 F2P00734 622 aa12.69□□□□□ -0.38
RANBP3-230ENST00000593025 AMHP03971 560 aa12.69□□□□□ -0.38
RANBP3-230ENST00000593025 PSEN2P49810 448 aa12.69□□□□□ -0.38
RANBP3-230ENST00000593025 FOXK2Q01167 660 aa12.69□□□□□ -0.38
RANBP3-230ENST00000593025 PDE4BQ07343 736 aa12.69□□□□□ -0.38
RANBP3-230ENST00000593025 SMAD4Q13485 552 aaKnown RBP12.69□□□□□ -0.38
RANBP3-230ENST00000593025 PLEKHG4Q58EX7 1191 aa12.69□□□□□ -0.38
RANBP3-230ENST00000593025 KBTBD3Q8NAB2 608 aa12.69□□□□□ -0.38
RANBP3-230ENST00000593025 PBXIP1Q96AQ6 731 aa12.69□□□□□ -0.38
RANBP3-230ENST00000593025 KIAA1671Q9BY89 1806 aa12.68□□□□□ -0.38
RANBP3-230ENST00000593025 C5orf67F2Z3F1 127 aa12.68□□□□□ -0.38
RANBP3-230ENST00000593025 STXBP3O00186 592 aa12.68□□□□□ -0.38
RANBP3-230ENST00000593025 RNF113AO15541 343 aaKnown RBP12.68□□□□□ -0.38
RANBP3-230ENST00000593025 RAB11FIP3O75154 756 aa12.68□□□□□ -0.38
RANBP3-230ENST00000593025 ZNF286BP0CG31 522 aa12.68□□□□□ -0.38
RANBP3-230ENST00000593025 PPARAQ07869 468 aa12.68□□□□□ -0.38
RANBP3-230ENST00000593025 CAMK1Q14012 370 aa12.68□□□□□ -0.38
RANBP3-230ENST00000593025 SYDE2Q5VT97 1194 aa12.68□□□□□ -0.38
RANBP3-230ENST00000593025 SERINC5Q86VE9 423 aa12.68□□□□□ -0.38
RANBP3-230ENST00000593025 FBXL6Q8N531 539 aa12.68□□□□□ -0.38
RANBP3-230ENST00000593025 DNERQ8NFT8 737 aa12.68□□□□□ -0.38
RANBP3-230ENST00000593025 DCAF4Q8WV16 495 aa12.68□□□□□ -0.38
RANBP3-230ENST00000593025 TOP1MTQ969P6 601 aa12.68□□□□□ -0.38
RANBP3-230ENST00000593025 MSLNLQ96KJ4 702 aa12.68□□□□□ -0.38
RANBP3-230ENST00000593025 SEC62Q99442 399 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms