RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 NECAB1Q8N987 351 aa17.6■□□□□ 0.41
TRIM47-206ENST00000592942 TSEN34Q9BSV6 310 aaKnown RBP17.6■□□□□ 0.41
TRIM47-206ENST00000592942 ZMYND12Q9H0C1 365 aa17.6■□□□□ 0.41
TRIM47-206ENST00000592942 RBM27Q9P2N5 1060 aaKnown RBP17.6■□□□□ 0.41
TRIM47-206ENST00000592942 DDX41Q9UJV9 622 aaKnown RBP17.6■□□□□ 0.41
TRIM47-206ENST00000592942 PCDHA6Q9UN73 950 aa17.6■□□□□ 0.41
TRIM47-206ENST00000592942 PCDHA8Q9Y5H6 950 aa17.6■□□□□ 0.41
TRIM47-206ENST00000592942 MYCNP04198 464 aaPredicted RBP17.59■□□□□ 0.41
TRIM47-206ENST00000592942 C6orf222P0C671 652 aaPredicted RBP17.59■□□□□ 0.41
TRIM47-206ENST00000592942 BEX3Q00994 111 aa17.59■□□□□ 0.41
TRIM47-206ENST00000592942 SSRP1Q08945 709 aaKnown RBP17.59■□□□□ 0.41
TRIM47-206ENST00000592942 LY6KQ17RY6 165 aa17.59■□□□□ 0.41
TRIM47-206ENST00000592942 NOL8Q76FK4 1167 aaKnown RBP17.59■□□□□ 0.41
TRIM47-206ENST00000592942 TLK2Q86UE8 772 aa17.59■□□□□ 0.41
TRIM47-206ENST00000592942 TEX2Q8IWB9 1127 aa17.59■□□□□ 0.41
TRIM47-206ENST00000592942 FERMT2Q96AC1 680 aa17.59■□□□□ 0.41
TRIM47-206ENST00000592942 HTATIP2Q9BUP3 242 aa17.59■□□□□ 0.41
TRIM47-206ENST00000592942 KIAA1217Q5T5P2 1943 aa17.59■□□□□ 0.41
TRIM47-206ENST00000592942 ALPK3Q96L96 1907 aa17.59■□□□□ 0.41
TRIM47-206ENST00000592942 ESYT2A0FGR8 921 aa17.58■□□□□ 0.4
TRIM47-206ENST00000592942 KBTBD13C9JR72 458 aa17.58■□□□□ 0.4
TRIM47-206ENST00000592942 CPLX1O14810 134 aa17.58■□□□□ 0.4
TRIM47-206ENST00000592942 TXNP10599 105 aaKnown RBP17.58■□□□□ 0.4
TRIM47-206ENST00000592942 CCND2P30279 289 aa17.58■□□□□ 0.4
TRIM47-206ENST00000592942 ACLYP53396 1101 aa17.58■□□□□ 0.4
TRIM47-206ENST00000592942 AKAP17AQ02040 695 aaKnown RBP17.58■□□□□ 0.4
TRIM47-206ENST00000592942 SP2Q02086 613 aa17.58■□□□□ 0.4
TRIM47-206ENST00000592942 TTLL4Q14679 1199 aa17.58■□□□□ 0.4
TRIM47-206ENST00000592942 GNASQ5JWF2 1037 aa17.58■□□□□ 0.4
TRIM47-206ENST00000592942 PCNX4Q63HM2 1172 aa17.58■□□□□ 0.4
TRIM47-206ENST00000592942 SLC39A5Q6ZMH5 540 aa17.58■□□□□ 0.4
TRIM47-206ENST00000592942 TBC1D32Q96NH3 1257 aa17.58■□□□□ 0.4
TRIM47-206ENST00000592942 AIFM3Q96NN9 605 aa17.58■□□□□ 0.4
TRIM47-206ENST00000592942 TMEM260Q9NX78 707 aa17.58■□□□□ 0.4
TRIM47-206ENST00000592942 RTEL1Q9NZ71 1219 aa17.58■□□□□ 0.4
TRIM47-206ENST00000592942 NKRFO15226 690 aaKnown RBP eCLIP17.57■□□□□ 0.4
TRIM47-206ENST00000592942 DEXIO95424 95 aa17.57■□□□□ 0.4
TRIM47-206ENST00000592942 ASGR1P07306 291 aa17.57■□□□□ 0.4
TRIM47-206ENST00000592942 FDPSP14324 419 aaKnown RBP17.57■□□□□ 0.4
TRIM47-206ENST00000592942 ADCY7P51828 1080 aa17.57■□□□□ 0.4
TRIM47-206ENST00000592942 SEMA3FQ13275 785 aa17.57■□□□□ 0.4
TRIM47-206ENST00000592942 FSCN1Q16658 493 aaKnown RBP17.57■□□□□ 0.4
TRIM47-206ENST00000592942 DPF3Q92784 378 aa17.57■□□□□ 0.4
TRIM47-206ENST00000592942 GTF3C6Q969F1 213 aa17.57■□□□□ 0.4
TRIM47-206ENST00000592942 INPP4AQ96PE3 977 aaPredicted RBP17.57■□□□□ 0.4
TRIM47-206ENST00000592942 AP5M1Q9H0R1 490 aa17.57■□□□□ 0.4
TRIM47-206ENST00000592942 BCAS3Q9H6U6 928 aa17.57■□□□□ 0.4
TRIM47-206ENST00000592942 SPC25Q9HBM1 224 aa17.57■□□□□ 0.4
TRIM47-206ENST00000592942 VPS54Q9P1Q0 977 aa17.57■□□□□ 0.4
TRIM47-206ENST00000592942 LIMCH1Q9UPQ0 1083 aa17.57■□□□□ 0.4
TRIM47-206ENST00000592942 A0A1W2PQ45 241 aaPredicted RBP17.56■□□□□ 0.4
TRIM47-206ENST00000592942 A0A1W2PQY0 241 aa17.56■□□□□ 0.4
TRIM47-206ENST00000592942 MOXD2PA6NHM9 499 aa17.56■□□□□ 0.4
TRIM47-206ENST00000592942 EDIL3O43854 480 aa17.56■□□□□ 0.4
TRIM47-206ENST00000592942 ICAM3P32942 547 aa17.56■□□□□ 0.4
TRIM47-206ENST00000592942 ATN1P54259 1190 aaPredicted RBP17.56■□□□□ 0.4
TRIM47-206ENST00000592942 ARHGAP1Q07960 439 aa17.56■□□□□ 0.4
TRIM47-206ENST00000592942 SNX17Q15036 470 aa17.56■□□□□ 0.4
TRIM47-206ENST00000592942 XRRA1Q6P2D8 792 aa17.56■□□□□ 0.4
TRIM47-206ENST00000592942 TRIM22Q8IYM9 498 aa17.56■□□□□ 0.4
TRIM47-206ENST00000592942 PCSK9Q8NBP7 692 aaKnown RBP17.56■□□□□ 0.4
TRIM47-206ENST00000592942 CRYGNQ8WXF5 182 aa17.56■□□□□ 0.4
TRIM47-206ENST00000592942 PGBD1Q96JS3 809 aa17.56■□□□□ 0.4
TRIM47-206ENST00000592942 SH3GLB2Q9NR46 395 aa17.56■□□□□ 0.4
TRIM47-206ENST00000592942 A6NJR5 290 aa17.55■□□□□ 0.4
TRIM47-206ENST00000592942 SPDYE3A6NKU9 549 aa17.55■□□□□ 0.4
TRIM47-206ENST00000592942 SPATA31C2B4DYI2 1134 aa17.55■□□□□ 0.4
TRIM47-206ENST00000592942 STAM2O75886 525 aa17.55■□□□□ 0.4
TRIM47-206ENST00000592942 TGFB3P10600 412 aa17.55■□□□□ 0.4
TRIM47-206ENST00000592942 ITGB5P18084 799 aa17.55■□□□□ 0.4
TRIM47-206ENST00000592942 NPY5RQ15761 445 aa17.55■□□□□ 0.4
TRIM47-206ENST00000592942 C1orf53Q5VUE5 145 aa17.55■□□□□ 0.4
TRIM47-206ENST00000592942 CPLX2Q6PUV4 134 aaKnown RBP17.55■□□□□ 0.4
TRIM47-206ENST00000592942 OR6J1Q8NGC5 347 aa17.55■□□□□ 0.4
TRIM47-206ENST00000592942 GLT8D2Q9H1C3 349 aa17.55■□□□□ 0.4
TRIM47-206ENST00000592942 UBIAD1Q9Y5Z9 338 aa17.55■□□□□ 0.4
TRIM47-206ENST00000592942 GRIN2DO15399 1336 aa17.54■□□□□ 0.4
TRIM47-206ENST00000592942 STK36Q9NRP7 1315 aa17.54■□□□□ 0.4
TRIM47-206ENST00000592942 FOSP01100 380 aaPredicted RBP17.54■□□□□ 0.4
TRIM47-206ENST00000592942 CDK7P50613 346 aa17.54■□□□□ 0.4
TRIM47-206ENST00000592942 RABEP1Q15276 862 aa17.54■□□□□ 0.4
TRIM47-206ENST00000592942 MYSM1Q5VVJ2 828 aa17.54■□□□□ 0.4
TRIM47-206ENST00000592942 JAKMIP3Q5VZ66 844 aa17.54■□□□□ 0.4
TRIM47-206ENST00000592942 CXCL17Q6UXB2 119 aa17.54■□□□□ 0.4
TRIM47-206ENST00000592942 NSUN7Q8NE18 718 aaKnown RBP17.54■□□□□ 0.4
TRIM47-206ENST00000592942 CCDC12Q8WUD4 166 aaPredicted RBP17.54■□□□□ 0.4
TRIM47-206ENST00000592942 EMID1Q96A84 441 aaPredicted RBP17.54■□□□□ 0.4
TRIM47-206ENST00000592942 ANO3Q9BYT9 981 aa17.54■□□□□ 0.4
TRIM47-206ENST00000592942 C6orf50Q9HD87 102 aa17.54■□□□□ 0.4
TRIM47-206ENST00000592942 GJB4Q9NTQ9 266 aa17.54■□□□□ 0.4
TRIM47-206ENST00000592942 MRVI1Q9Y6F6 885 aa17.54■□□□□ 0.4
TRIM47-206ENST00000592942 ELP1O95163 1332 aa17.53■□□□□ 0.4
TRIM47-206ENST00000592942 M0R2N6 131 aa17.53■□□□□ 0.4
TRIM47-206ENST00000592942 EVI5O60447 810 aa17.53■□□□□ 0.4
TRIM47-206ENST00000592942 CDKL5O76039 1030 aa17.53■□□□□ 0.4
TRIM47-206ENST00000592942 CD2BP2O95400 341 aaKnown RBP17.53■□□□□ 0.4
TRIM47-206ENST00000592942 GH1P01241 217 aa17.53■□□□□ 0.4
TRIM47-206ENST00000592942 GNA11P29992 359 aa17.53■□□□□ 0.4
TRIM47-206ENST00000592942 SREBF1P36956 1147 aa17.53■□□□□ 0.4
TRIM47-206ENST00000592942 RTP1P59025 263 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms