RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 B4GALT4O60513 344 aa23.32■■□□□ 1.32
CIRBP-239ENST00000592467 MYL3P08590 195 aa23.32■■□□□ 1.32
CIRBP-239ENST00000592467 FUT2Q10981 343 aa23.32■■□□□ 1.32
CIRBP-239ENST00000592467 GPR153Q6NV75 609 aa23.32■■□□□ 1.32
CIRBP-239ENST00000592467 MICU3Q86XE3 530 aa23.32■■□□□ 1.32
CIRBP-239ENST00000592467 MTG1Q9BT17 334 aaPredicted RBP23.32■■□□□ 1.32
CIRBP-239ENST00000592467 TRPV6Q9H1D0 765 aa23.32■■□□□ 1.32
CIRBP-239ENST00000592467 GH1P01241 217 aa23.31■■□□□ 1.32
CIRBP-239ENST00000592467 CPA1P15085 419 aa23.31■■□□□ 1.32
CIRBP-239ENST00000592467 MFSD5Q6N075 450 aa23.31■■□□□ 1.32
CIRBP-239ENST00000592467 FCHSD1Q86WN1 690 aa23.31■■□□□ 1.32
CIRBP-239ENST00000592467 AFG1LQ8WV93 481 aa23.31■■□□□ 1.32
CIRBP-239ENST00000592467 EMID1Q96A84 441 aaPredicted RBP23.31■■□□□ 1.32
CIRBP-239ENST00000592467 ALDH8A1Q9H2A2 487 aaPredicted RBP23.31■■□□□ 1.32
CIRBP-239ENST00000592467 FAM217BQ9NTX9 383 aaPredicted RBP23.31■■□□□ 1.32
CIRBP-239ENST00000592467 PPP4R2Q9NY27 417 aa23.31■■□□□ 1.32
CIRBP-239ENST00000592467 hCG_1642624A0A1W2PR95 340 aa23.3■■□□□ 1.32
CIRBP-239ENST00000592467 PIK3CDO00329 1044 aa23.3■■□□□ 1.32
CIRBP-239ENST00000592467 TLR3O15455 904 aaKnown RBP23.3■■□□□ 1.32
CIRBP-239ENST00000592467 MMP3P08254 477 aa23.3■■□□□ 1.32
CIRBP-239ENST00000592467 MYCLP12524 364 aaPredicted RBP23.3■■□□□ 1.32
CIRBP-239ENST00000592467 MRPS9P82933 396 aaKnown RBP23.3■■□□□ 1.32
CIRBP-239ENST00000592467 FPGSQ05932 587 aa23.3■■□□□ 1.32
CIRBP-239ENST00000592467 C16orf59Q7L2K0 433 aa23.3■■□□□ 1.32
CIRBP-239ENST00000592467 GPKOWQ92917 476 aaPredicted RBP eCLIP23.3■■□□□ 1.32
CIRBP-239ENST00000592467 ZFP91Q96JP5 570 aaPredicted RBP23.3■■□□□ 1.32
CIRBP-239ENST00000592467 UMODL1Q5DID0 1318 aa23.3■■□□□ 1.32
CIRBP-239ENST00000592467 CNTNAP5Q8WYK1 1306 aa23.3■■□□□ 1.32
CIRBP-239ENST00000592467 KPNA6O60684 536 aa23.29■■□□□ 1.32
CIRBP-239ENST00000592467 SP2Q02086 613 aa23.29■■□□□ 1.32
CIRBP-239ENST00000592467 NBPF20Q3BBV1 942 aa23.29■■□□□ 1.32
CIRBP-239ENST00000592467 ERICH6BQ5W0A0 696 aa23.29■■□□□ 1.32
CIRBP-239ENST00000592467 USP17L6PQ6QN14 398 aa23.29■■□□□ 1.32
CIRBP-239ENST00000592467 CCDC82Q8N4S0 544 aa23.29■■□□□ 1.32
CIRBP-239ENST00000592467 PPP1R13LQ8WUF5 828 aa23.29■■□□□ 1.32
CIRBP-239ENST00000592467 SEC63Q9UGP8 760 aaKnown RBP23.29■■□□□ 1.32
CIRBP-239ENST00000592467 HMGB1P09429 215 aaKnown RBP23.28■■□□□ 1.32
CIRBP-239ENST00000592467 KAT2BQ92831 832 aa23.28■■□□□ 1.32
CIRBP-239ENST00000592467 NOC4LQ9BVI4 516 aaKnown RBP23.28■■□□□ 1.32
CIRBP-239ENST00000592467 PPP1R12CQ9BZL4 782 aa23.28■■□□□ 1.32
CIRBP-239ENST00000592467 MRVI1Q9Y6F6 885 aa23.28■■□□□ 1.32
CIRBP-239ENST00000592467 DOCK5Q9H7D0 1870 aa23.28■■□□□ 1.32
CIRBP-239ENST00000592467 ZBTB43O43298 467 aa23.27■■□□□ 1.32
CIRBP-239ENST00000592467 HOXD8P13378 290 aaPredicted RBP23.27■■□□□ 1.32
CIRBP-239ENST00000592467 CDC27P30260 824 aa23.27■■□□□ 1.32
CIRBP-239ENST00000592467 CCND2P30279 289 aa23.27■■□□□ 1.32
CIRBP-239ENST00000592467 CYP2C18P33260 490 aa23.27■■□□□ 1.32
CIRBP-239ENST00000592467 SEMA3FQ13275 785 aa23.27■■□□□ 1.32
CIRBP-239ENST00000592467 BRDTQ58F21 947 aaPredicted RBP23.27■■□□□ 1.32
CIRBP-239ENST00000592467 FBXL16Q8N461 479 aa23.27■■□□□ 1.32
CIRBP-239ENST00000592467 VWCEQ96DN2 955 aa23.27■■□□□ 1.32
CIRBP-239ENST00000592467 JAKMIP1Q96N16 626 aaKnown RBP23.27■■□□□ 1.32
CIRBP-239ENST00000592467 INPP4AQ96PE3 977 aaPredicted RBP23.27■■□□□ 1.32
CIRBP-239ENST00000592467 AGXT2Q9BYV1 514 aa23.27■■□□□ 1.32
CIRBP-239ENST00000592467 TRMT13Q9NUP7 481 aaKnown RBP23.27■■□□□ 1.32
CIRBP-239ENST00000592467 RBM28Q9NW13 759 aaKnown RBP23.27■■□□□ 1.32
CIRBP-239ENST00000592467 KLF18A0A0U1RQI7 1052 aa23.26■■□□□ 1.31
CIRBP-239ENST00000592467 REC8O95072 547 aa23.26■■□□□ 1.31
CIRBP-239ENST00000592467 CSF2RAP15509 400 aa23.26■■□□□ 1.31
CIRBP-239ENST00000592467 MYSM1Q5VVJ2 828 aa23.26■■□□□ 1.31
CIRBP-239ENST00000592467 TYW1BQ6NUM6 668 aa23.26■■□□□ 1.31
CIRBP-239ENST00000592467 NFRKBQ6P4R8 1299 aa23.26■■□□□ 1.31
CIRBP-239ENST00000592467 SYNE3Q6ZMZ3 975 aa23.26■■□□□ 1.31
CIRBP-239ENST00000592467 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.26■■□□□ 1.31
CIRBP-239ENST00000592467 WNT8AQ9H1J5 351 aa23.26■■□□□ 1.31
CIRBP-239ENST00000592467 HIPK3Q9H422 1215 aa23.26■■□□□ 1.31
CIRBP-239ENST00000592467 BCAS3Q9H6U6 928 aa23.26■■□□□ 1.31
CIRBP-239ENST00000592467 EPB41L2O43491 1005 aaKnown RBP23.25■■□□□ 1.31
CIRBP-239ENST00000592467 TGFB3P10600 412 aa23.25■■□□□ 1.31
CIRBP-239ENST00000592467 UBA1P22314 1058 aaKnown RBP23.25■■□□□ 1.31
CIRBP-239ENST00000592467 ICAM3P32942 547 aa23.25■■□□□ 1.31
CIRBP-239ENST00000592467 RCAN1P53805 252 aa23.25■■□□□ 1.31
CIRBP-239ENST00000592467 LAMC2Q13753 1193 aa23.25■■□□□ 1.31
CIRBP-239ENST00000592467 RTN1Q16799 776 aa23.25■■□□□ 1.31
CIRBP-239ENST00000592467 CELF3Q5SZQ8 465 aaKnown RBP23.25■■□□□ 1.31
CIRBP-239ENST00000592467 KCNV1Q6PIU1 500 aa23.25■■□□□ 1.31
CIRBP-239ENST00000592467 Q7L0L9 218 aa23.25■■□□□ 1.31
CIRBP-239ENST00000592467 PPTC7Q8NI37 304 aa23.25■■□□□ 1.31
CIRBP-239ENST00000592467 CTAGE1Q96RT6 745 aa23.25■■□□□ 1.31
CIRBP-239ENST00000592467 NID2Q14112 1375 aa23.25■■□□□ 1.31
CIRBP-239ENST00000592467 COL6A3P12111 3177 aa23.24■■□□□ 1.31
CIRBP-239ENST00000592467 PTPN11Q06124 597 aaPredicted RBP23.24■■□□□ 1.31
CIRBP-239ENST00000592467 HSDL1Q3SXM5 330 aa23.24■■□□□ 1.31
CIRBP-239ENST00000592467 TMEM240Q5SV17 173 aa23.24■■□□□ 1.31
CIRBP-239ENST00000592467 RASIP1Q5U651 963 aa23.24■■□□□ 1.31
CIRBP-239ENST00000592467 WWC2Q6AWC2 1192 aa23.24■■□□□ 1.31
CIRBP-239ENST00000592467 Q6ZUG5 572 aa23.24■■□□□ 1.31
CIRBP-239ENST00000592467 DHX37Q8IY37 1157 aaKnown RBP23.24■■□□□ 1.31
CIRBP-239ENST00000592467 SMARCC2Q8TAQ2 1214 aa23.24■■□□□ 1.31
CIRBP-239ENST00000592467 PSTPIP2Q9H939 334 aa23.24■■□□□ 1.31
CIRBP-239ENST00000592467 TANC1Q9C0D5 1861 aa23.24■■□□□ 1.31
CIRBP-239ENST00000592467 SCN5AQ14524 2016 aa23.23■■□□□ 1.31
CIRBP-239ENST00000592467 GOLGA8AA7E2F4 631 aa23.23■■□□□ 1.31
CIRBP-239ENST00000592467 GOLGA8BA8MQT2 603 aa23.23■■□□□ 1.31
CIRBP-239ENST00000592467 SPATA31C2B4DYI2 1134 aa23.23■■□□□ 1.31
CIRBP-239ENST00000592467 HAS3O00219 553 aa23.23■■□□□ 1.31
CIRBP-239ENST00000592467 STAM2O75886 525 aa23.23■■□□□ 1.31
CIRBP-239ENST00000592467 GGPS1O95749 300 aa23.23■■□□□ 1.31
CIRBP-239ENST00000592467 CYP2C9P11712 490 aa23.23■■□□□ 1.31
CIRBP-239ENST00000592467 RPS6KB1P23443 525 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms