RNA–Protein interactions for RNA: ENST00000592395.5

TCF3-216, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 996 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-216ENST00000592395 TLK2Q86UE8 772 aa21.4■■□□□ 1.02
TCF3-216ENST00000592395 VSIG10LQ86VR7 867 aa21.4■■□□□ 1.02
TCF3-216ENST00000592395 KLHDC9Q8NEP7 349 aa21.4■■□□□ 1.02
TCF3-216ENST00000592395 KIF2CQ99661 725 aa21.4■■□□□ 1.02
TCF3-216ENST00000592395 GLT8D2Q9H1C3 349 aa21.4■■□□□ 1.02
TCF3-216ENST00000592395 RIC8AQ9NPQ8 531 aa21.4■■□□□ 1.02
TCF3-216ENST00000592395 NKRFO15226 690 aaKnown RBP eCLIP21.39■■□□□ 1.01
TCF3-216ENST00000592395 C6orf222P0C671 652 aaPredicted RBP21.39■■□□□ 1.01
TCF3-216ENST00000592395 MYCLP12524 364 aaPredicted RBP21.39■■□□□ 1.01
TCF3-216ENST00000592395 ADCY7P51828 1080 aa21.39■■□□□ 1.01
TCF3-216ENST00000592395 SSRP1Q08945 709 aaKnown RBP21.39■■□□□ 1.01
TCF3-216ENST00000592395 IL31RAQ8NI17 732 aa21.39■■□□□ 1.01
TCF3-216ENST00000592395 CCDC12Q8WUD4 166 aaPredicted RBP21.39■■□□□ 1.01
TCF3-216ENST00000592395 TSEN34Q9BSV6 310 aaKnown RBP21.39■■□□□ 1.01
TCF3-216ENST00000592395 SENP6Q9GZR1 1112 aaPredicted RBP21.39■■□□□ 1.01
TCF3-216ENST00000592395 AP5M1Q9H0R1 490 aa21.39■■□□□ 1.01
TCF3-216ENST00000592395 ESYT2A0FGR8 921 aa21.38■■□□□ 1.01
TCF3-216ENST00000592395 SMCO2A6NFE2 343 aa21.38■■□□□ 1.01
TCF3-216ENST00000592395 PPFIA3O75145 1194 aa21.38■■□□□ 1.01
TCF3-216ENST00000592395 CDKL5O76039 1030 aa21.38■■□□□ 1.01
TCF3-216ENST00000592395 TTLL4Q14679 1199 aa21.38■■□□□ 1.01
TCF3-216ENST00000592395 UBE2SQ16763 222 aa21.38■■□□□ 1.01
TCF3-216ENST00000592395 TMEM63BQ5T3F8 832 aa21.38■■□□□ 1.01
TCF3-216ENST00000592395 SEPT14Q6ZU15 432 aa21.38■■□□□ 1.01
TCF3-216ENST00000592395 PHF24Q9UPV7 400 aa21.38■■□□□ 1.01
TCF3-216ENST00000592395 MYADML2A6NDP7 307 aa21.37■■□□□ 1.01
TCF3-216ENST00000592395 SPDYE3A6NKU9 549 aa21.37■■□□□ 1.01
TCF3-216ENST00000592395 DYNC1LI2O43237 492 aaPredicted RBP21.37■■□□□ 1.01
TCF3-216ENST00000592395 STAM2O75886 525 aa21.37■■□□□ 1.01
TCF3-216ENST00000592395 TXNP10599 105 aaKnown RBP21.37■■□□□ 1.01
TCF3-216ENST00000592395 CCSAPQ6IQ19 270 aaPredicted RBP21.37■■□□□ 1.01
TCF3-216ENST00000592395 PCSK9Q8NBP7 692 aaKnown RBP21.37■■□□□ 1.01
TCF3-216ENST00000592395 DPF3Q92784 378 aa21.37■■□□□ 1.01
TCF3-216ENST00000592395 MOXD2PA6NHM9 499 aa21.36■■□□□ 1.01
TCF3-216ENST00000592395 CTAGE5O15320 804 aa21.36■■□□□ 1.01
TCF3-216ENST00000592395 DEXIO95424 95 aa21.36■■□□□ 1.01
TCF3-216ENST00000592395 PTGS1P23219 599 aa21.36■■□□□ 1.01
TCF3-216ENST00000592395 IRX5P78411 483 aaPredicted RBP21.36■■□□□ 1.01
TCF3-216ENST00000592395 KCNA10Q16322 511 aa21.36■■□□□ 1.01
TCF3-216ENST00000592395 ME3Q16798 604 aa21.36■■□□□ 1.01
TCF3-216ENST00000592395 GNASQ5JWF2 1037 aa21.36■■□□□ 1.01
TCF3-216ENST00000592395 XRRA1Q6P2D8 792 aa21.36■■□□□ 1.01
TCF3-216ENST00000592395 CCDC62Q6P9F0 684 aa21.36■■□□□ 1.01
TCF3-216ENST00000592395 CCDC148Q8NFR7 591 aa21.36■■□□□ 1.01
TCF3-216ENST00000592395 ZMYND12Q9H0C1 365 aa21.36■■□□□ 1.01
TCF3-216ENST00000592395 EHMT1Q9H9B1 1298 aa21.36■■□□□ 1.01
TCF3-216ENST00000592395 PCDHA6Q9UN73 950 aa21.36■■□□□ 1.01
TCF3-216ENST00000592395 PCDHA8Q9Y5H6 950 aa21.36■■□□□ 1.01
TCF3-216ENST00000592395 PDE4DIPQ5VU43 2346 aa21.36■■□□□ 1.01
TCF3-216ENST00000592395 ARIH2O95376 493 aa21.35■■□□□ 1.01
TCF3-216ENST00000592395 LARGE1O95461 756 aa21.35■■□□□ 1.01
TCF3-216ENST00000592395 FOSP01100 380 aaPredicted RBP21.35■■□□□ 1.01
TCF3-216ENST00000592395 ACLYP53396 1101 aa21.35■■□□□ 1.01
TCF3-216ENST00000592395 RABEP1Q15276 862 aa21.35■■□□□ 1.01
TCF3-216ENST00000592395 FSCN1Q16658 493 aaKnown RBP21.35■■□□□ 1.01
TCF3-216ENST00000592395 PCNX4Q63HM2 1172 aa21.35■■□□□ 1.01
TCF3-216ENST00000592395 KCNV1Q6PIU1 500 aa21.35■■□□□ 1.01
TCF3-216ENST00000592395 OR6J1Q8NGC5 347 aa21.35■■□□□ 1.01
TCF3-216ENST00000592395 GTF3C6Q969F1 213 aa21.35■■□□□ 1.01
TCF3-216ENST00000592395 C6orf50Q9HD87 102 aa21.35■■□□□ 1.01
TCF3-216ENST00000592395 SH3GLB2Q9NR46 395 aa21.35■■□□□ 1.01
TCF3-216ENST00000592395 MRVI1Q9Y6F6 885 aa21.35■■□□□ 1.01
TCF3-216ENST00000592395 STK36Q9NRP7 1315 aa21.34■■□□□ 1.01
TCF3-216ENST00000592395 A0A1W2PQ45 241 aaPredicted RBP21.34■■□□□ 1.01
TCF3-216ENST00000592395 A0A1W2PQY0 241 aa21.34■■□□□ 1.01
TCF3-216ENST00000592395 ZEB2O60315 1214 aa21.34■■□□□ 1.01
TCF3-216ENST00000592395 RGS20O76081 388 aa21.34■■□□□ 1.01
TCF3-216ENST00000592395 GNA11P29992 359 aa21.34■■□□□ 1.01
TCF3-216ENST00000592395 CLK2P49760 499 aaKnown RBP21.34■■□□□ 1.01
TCF3-216ENST00000592395 MRPS9P82933 396 aaKnown RBP21.34■■□□□ 1.01
TCF3-216ENST00000592395 BEX3Q00994 111 aa21.34■■□□□ 1.01
TCF3-216ENST00000592395 AP3B2Q13367 1082 aa21.34■■□□□ 1.01
TCF3-216ENST00000592395 IL27Q8NEV9 243 aa21.34■■□□□ 1.01
TCF3-216ENST00000592395 FERMT2Q96AC1 680 aa21.34■■□□□ 1.01
TCF3-216ENST00000592395 TBC1D32Q96NH3 1257 aa21.34■■□□□ 1.01
TCF3-216ENST00000592395 BACH2Q9BYV9 841 aa21.34■■□□□ 1.01
TCF3-216ENST00000592395 LIMCH1Q9UPQ0 1083 aa21.34■■□□□ 1.01
TCF3-216ENST00000592395 EVI5O60447 810 aa21.33■■□□□ 1.01
TCF3-216ENST00000592395 ASGR1P07306 291 aa21.33■■□□□ 1.01
TCF3-216ENST00000592395 CPT1AP50416 773 aa21.33■■□□□ 1.01
TCF3-216ENST00000592395 LY6KQ17RY6 165 aa21.33■■□□□ 1.01
TCF3-216ENST00000592395 LRRC26Q2I0M4 334 aa21.33■■□□□ 1.01
TCF3-216ENST00000592395 GNPTABQ3T906 1256 aa21.33■■□□□ 1.01
TCF3-216ENST00000592395 SLC39A5Q6ZMH5 540 aa21.33■■□□□ 1.01
TCF3-216ENST00000592395 FAM177A1Q8N128 213 aaPredicted RBP21.33■■□□□ 1.01
TCF3-216ENST00000592395 NECAB1Q8N987 351 aa21.33■■□□□ 1.01
TCF3-216ENST00000592395 COPS5Q92905 334 aa21.33■■□□□ 1.01
TCF3-216ENST00000592395 INPP4AQ96PE3 977 aaPredicted RBP21.33■■□□□ 1.01
TCF3-216ENST00000592395 VPS54Q9P1Q0 977 aa21.33■■□□□ 1.01
TCF3-216ENST00000592395 DDX41Q9UJV9 622 aaKnown RBP21.33■■□□□ 1.01
TCF3-216ENST00000592395 GH1P01241 217 aa21.32■■□□□ 1
TCF3-216ENST00000592395 TGFB3P10600 412 aa21.32■■□□□ 1
TCF3-216ENST00000592395 ATN1P54259 1190 aaPredicted RBP21.32■■□□□ 1
TCF3-216ENST00000592395 SNX17Q15036 470 aa21.32■■□□□ 1
TCF3-216ENST00000592395 MCTP2Q6DN12 878 aa21.32■■□□□ 1
TCF3-216ENST00000592395 BICD2Q8TD16 824 aa21.32■■□□□ 1
TCF3-216ENST00000592395 ZFP91Q96JP5 570 aaPredicted RBP21.32■■□□□ 1
TCF3-216ENST00000592395 GLT1D1Q96MS3 346 aa21.32■■□□□ 1
TCF3-216ENST00000592395 ANO3Q9BYT9 981 aa21.32■■□□□ 1
TCF3-216ENST00000592395 MYH7BA7E2Y1 1941 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms