RNA–Protein interactions for RNA: ENST00000592338.5

CNN1-209, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 525 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-209ENST00000592338 TOX2Q96NM4 488 aa18.63■□□□□ 0.57
CNN1-209ENST00000592338 TMEM39AQ9NV64 488 aa18.63■□□□□ 0.57
CNN1-209ENST00000592338 NAP1L2Q9ULW6 460 aaPredicted RBP18.63■□□□□ 0.57
CNN1-209ENST00000592338 GBF1Q92538 1859 aa18.63■□□□□ 0.57
CNN1-209ENST00000592338 DCDC2CA8MYV0 355 aa18.62■□□□□ 0.57
CNN1-209ENST00000592338 KIAA0355O15063 1070 aa18.62■□□□□ 0.57
CNN1-209ENST00000592338 EIF3JO75822 258 aaKnown RBP18.62■□□□□ 0.57
CNN1-209ENST00000592338 CABYRO75952 493 aa18.62■□□□□ 0.57
CNN1-209ENST00000592338 RGS20O76081 388 aa18.62■□□□□ 0.57
CNN1-209ENST00000592338 CASTP20810 708 aaKnown RBP18.62■□□□□ 0.57
CNN1-209ENST00000592338 CPT1AP50416 773 aa18.62■□□□□ 0.57
CNN1-209ENST00000592338 FGD1P98174 961 aa18.62■□□□□ 0.57
CNN1-209ENST00000592338 PURAQ00577 322 aaKnown RBP18.62■□□□□ 0.57
CNN1-209ENST00000592338 ARHGAP1Q07960 439 aa18.62■□□□□ 0.57
CNN1-209ENST00000592338 ITGA7Q13683 1181 aa18.62■□□□□ 0.57
CNN1-209ENST00000592338 USP17L6PQ6QN14 398 aa18.62■□□□□ 0.57
CNN1-209ENST00000592338 TDHQ8IZJ6 230 aa18.62■□□□□ 0.57
CNN1-209ENST00000592338 SLC43A3Q8NBI5 491 aa18.62■□□□□ 0.57
CNN1-209ENST00000592338 BRF1Q92994 677 aa18.62■□□□□ 0.57
CNN1-209ENST00000592338 TBX21Q9UL17 535 aa18.62■□□□□ 0.57
CNN1-209ENST00000592338 FRMPD4Q14CM0 1322 aa18.62■□□□□ 0.57
CNN1-209ENST00000592338 MROH7Q68CQ1 1323 aa18.62■□□□□ 0.57
CNN1-209ENST00000592338 KAT6AQ92794 2004 aa18.61■□□□□ 0.57
CNN1-209ENST00000592338 SORBS3O60504 671 aa18.61■□□□□ 0.57
CNN1-209ENST00000592338 RPS6KB1P23443 525 aa18.61■□□□□ 0.57
CNN1-209ENST00000592338 CDC27P30260 824 aa18.61■□□□□ 0.57
CNN1-209ENST00000592338 LRCH3Q96II8 777 aa18.61■□□□□ 0.57
CNN1-209ENST00000592338 USP26Q9BXU7 913 aa18.61■□□□□ 0.57
CNN1-209ENST00000592338 FAM217BQ9NTX9 383 aaPredicted RBP18.61■□□□□ 0.57
CNN1-209ENST00000592338 POLR3EQ9NVU0 708 aa18.61■□□□□ 0.57
CNN1-209ENST00000592338 RBM28Q9NW13 759 aaKnown RBP18.61■□□□□ 0.57
CNN1-209ENST00000592338 MRVI1Q9Y6F6 885 aa18.61■□□□□ 0.57
CNN1-209ENST00000592338 A6NJR5 290 aa18.6■□□□□ 0.57
CNN1-209ENST00000592338 MEIS2O14770 477 aa18.6■□□□□ 0.57
CNN1-209ENST00000592338 GH1P01241 217 aa18.6■□□□□ 0.57
CNN1-209ENST00000592338 RAG1P15918 1043 aa18.6■□□□□ 0.57
CNN1-209ENST00000592338 CCND2P30279 289 aa18.6■□□□□ 0.57
CNN1-209ENST00000592338 FUT2Q10981 343 aa18.6■□□□□ 0.57
CNN1-209ENST00000592338 HEATR3Q7Z4Q2 680 aa18.6■□□□□ 0.57
CNN1-209ENST00000592338 VSIG10LQ86VR7 867 aa18.6■□□□□ 0.57
CNN1-209ENST00000592338 SMARCC2Q8TAQ2 1214 aa18.6■□□□□ 0.57
CNN1-209ENST00000592338 AFG1LQ8WV93 481 aa18.6■□□□□ 0.57
CNN1-209ENST00000592338 DDX41Q9UJV9 622 aaKnown RBP18.6■□□□□ 0.57
CNN1-209ENST00000592338 TLR3O15455 904 aaKnown RBP18.59■□□□□ 0.57
CNN1-209ENST00000592338 CD4P01730 458 aa18.59■□□□□ 0.57
CNN1-209ENST00000592338 MMP3P08254 477 aa18.59■□□□□ 0.57
CNN1-209ENST00000592338 MRPS9P82933 396 aaKnown RBP18.59■□□□□ 0.57
CNN1-209ENST00000592338 UBE2SQ16763 222 aa18.59■□□□□ 0.57
CNN1-209ENST00000592338 WWC2Q6AWC2 1192 aa18.59■□□□□ 0.57
CNN1-209ENST00000592338 CUL5Q93034 780 aa18.59■□□□□ 0.57
CNN1-209ENST00000592338 MTG1Q9BT17 334 aaPredicted RBP18.59■□□□□ 0.57
CNN1-209ENST00000592338 PPP1R12CQ9BZL4 782 aa18.59■□□□□ 0.57
CNN1-209ENST00000592338 PIK3CDO00329 1044 aa18.58■□□□□ 0.56
CNN1-209ENST00000592338 B4GALT4O60513 344 aa18.58■□□□□ 0.56
CNN1-209ENST00000592338 METAP2P50579 478 aaKnown RBP eCLIP18.58■□□□□ 0.56
CNN1-209ENST00000592338 EPHB4P54760 987 aa18.58■□□□□ 0.56
CNN1-209ENST00000592338 BRDTQ58F21 947 aaPredicted RBP18.58■□□□□ 0.56
CNN1-209ENST00000592338 C9orf50Q5SZB4 431 aa18.58■□□□□ 0.56
CNN1-209ENST00000592338 TYW1BQ6NUM6 668 aa18.58■□□□□ 0.56
CNN1-209ENST00000592338 TRPV6Q9H1D0 765 aa18.58■□□□□ 0.56
CNN1-209ENST00000592338 WDR81Q562E7 1941 aa18.58■□□□□ 0.56
CNN1-209ENST00000592338 LAMA2P24043 3122 aaKnown RBP18.58■□□□□ 0.56
CNN1-209ENST00000592338 NID2Q14112 1375 aa18.57■□□□□ 0.56
CNN1-209ENST00000592338 UMODL1Q5DID0 1318 aa18.57■□□□□ 0.56
CNN1-209ENST00000592338 EPB41L2O43491 1005 aaKnown RBP18.57■□□□□ 0.56
CNN1-209ENST00000592338 UBA1P22314 1058 aaKnown RBP18.57■□□□□ 0.56
CNN1-209ENST00000592338 PSMA5P28066 241 aa18.57■□□□□ 0.56
CNN1-209ENST00000592338 ADD1P35611 737 aaKnown RBP18.57■□□□□ 0.56
CNN1-209ENST00000592338 RCAN1P53805 252 aa18.57■□□□□ 0.56
CNN1-209ENST00000592338 CHMP4BP1P59074 171 aa18.57■□□□□ 0.56
CNN1-209ENST00000592338 SHHQ15465 462 aa18.57■□□□□ 0.56
CNN1-209ENST00000592338 TET1Q8NFU7 2136 aa18.57■□□□□ 0.56
CNN1-209ENST00000592338 AGXT2Q9BYV1 514 aa18.57■□□□□ 0.56
CNN1-209ENST00000592338 PSTPIP2Q9H939 334 aa18.57■□□□□ 0.56
CNN1-209ENST00000592338 V9GY48 417 aaPredicted RBP18.57■□□□□ 0.56
CNN1-209ENST00000592338 GGPS1O95749 300 aa18.56■□□□□ 0.56
CNN1-209ENST00000592338 TIMP1P01033 207 aa18.56■□□□□ 0.56
CNN1-209ENST00000592338 SP2Q02086 613 aa18.56■□□□□ 0.56
CNN1-209ENST00000592338 FPGSQ05932 587 aa18.56■□□□□ 0.56
CNN1-209ENST00000592338 SEMA3FQ13275 785 aa18.56■□□□□ 0.56
CNN1-209ENST00000592338 NBPF20Q3BBV1 942 aa18.56■□□□□ 0.56
CNN1-209ENST00000592338 FAM47CQ5HY64 1035 aa18.56■□□□□ 0.56
CNN1-209ENST00000592338 RUFY3Q7L099 469 aa18.56■□□□□ 0.56
CNN1-209ENST00000592338 DHX37Q8IY37 1157 aaKnown RBP18.56■□□□□ 0.56
CNN1-209ENST00000592338 UPF3BQ9BZI7 483 aaKnown RBP18.56■□□□□ 0.56
CNN1-209ENST00000592338 ALDH8A1Q9H2A2 487 aaPredicted RBP18.56■□□□□ 0.56
CNN1-209ENST00000592338 BCAS3Q9H6U6 928 aa18.56■□□□□ 0.56
CNN1-209ENST00000592338 TRMT13Q9NUP7 481 aaKnown RBP18.56■□□□□ 0.56
CNN1-209ENST00000592338 RTEL1Q9NZ71 1219 aa18.56■□□□□ 0.56
CNN1-209ENST00000592338 STXBP3O00186 592 aa18.55■□□□□ 0.56
CNN1-209ENST00000592338 CYP2C18P33260 490 aa18.55■□□□□ 0.56
CNN1-209ENST00000592338 NAPAP54920 295 aa18.55■□□□□ 0.56
CNN1-209ENST00000592338 TOB2Q14106 344 aaPredicted RBP18.55■□□□□ 0.56
CNN1-209ENST00000592338 LRIT3Q3SXY7 679 aa18.55■□□□□ 0.56
CNN1-209ENST00000592338 EMID1Q96A84 441 aaPredicted RBP18.55■□□□□ 0.56
CNN1-209ENST00000592338 ZSWIM6Q9HCJ5 1215 aa18.55■□□□□ 0.56
CNN1-209ENST00000592338 KPNA6O60684 536 aa18.54■□□□□ 0.56
CNN1-209ENST00000592338 PPFIA3O75145 1194 aa18.54■□□□□ 0.56
CNN1-209ENST00000592338 ZNF286BP0CG31 522 aa18.54■□□□□ 0.56
CNN1-209ENST00000592338 CELF3Q5SZQ8 465 aaKnown RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms