RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 SUPT20HL2P0C7V6 817 aa12.18□□□□□ -0.46
VPS4B-207ENST00000591519 ACRP10323 421 aa12.18□□□□□ -0.46
VPS4B-207ENST00000591519 CALML3P27482 149 aa12.18□□□□□ -0.46
VPS4B-207ENST00000591519 CPT1AP50416 773 aa12.18□□□□□ -0.46
VPS4B-207ENST00000591519 MRPL12P52815 198 aaKnown RBP12.18□□□□□ -0.46
VPS4B-207ENST00000591519 PURAQ00577 322 aaKnown RBP12.18□□□□□ -0.46
VPS4B-207ENST00000591519 THSD4Q6ZMP0 1018 aa12.18□□□□□ -0.46
VPS4B-207ENST00000591519 PNMA1Q8ND90 353 aa12.18□□□□□ -0.46
VPS4B-207ENST00000591519 TIFAQ96CG3 184 aa12.18□□□□□ -0.46
VPS4B-207ENST00000591519 MPHOSPH6Q99547 160 aaKnown RBP12.18□□□□□ -0.46
VPS4B-207ENST00000591519 ZKSCAN3Q9BRR0 538 aa12.18□□□□□ -0.46
VPS4B-207ENST00000591519 PBX4Q9BYU1 374 aa12.18□□□□□ -0.46
VPS4B-207ENST00000591519 UBA5Q9GZZ9 404 aa12.18□□□□□ -0.46
VPS4B-207ENST00000591519 TRPV6Q9H1D0 765 aa12.18□□□□□ -0.46
VPS4B-207ENST00000591519 ALDH8A1Q9H2A2 487 aaPredicted RBP12.18□□□□□ -0.46
VPS4B-207ENST00000591519 CTNNA3Q9UI47 895 aa12.18□□□□□ -0.46
VPS4B-207ENST00000591519 CDH23Q9H251 3354 aa12.17□□□□□ -0.46
VPS4B-207ENST00000591519 GOLGA8CPA6NN73 597 aa12.17□□□□□ -0.46
VPS4B-207ENST00000591519 GOLGA8HP0CJ92 632 aa12.17□□□□□ -0.46
VPS4B-207ENST00000591519 FOSL2P15408 326 aa12.17□□□□□ -0.46
VPS4B-207ENST00000591519 PSMC6P62333 389 aa12.17□□□□□ -0.46
VPS4B-207ENST00000591519 PDE4DQ08499 809 aa12.17□□□□□ -0.46
VPS4B-207ENST00000591519 RPUSD2Q8IZ73 545 aaKnown RBP12.17□□□□□ -0.46
VPS4B-207ENST00000591519 SCFD2Q8WU76 684 aa12.17□□□□□ -0.46
VPS4B-207ENST00000591519 VWCEQ96DN2 955 aa12.17□□□□□ -0.46
VPS4B-207ENST00000591519 ZSCAN10Q96SZ4 725 aaPredicted RBP12.17□□□□□ -0.46
VPS4B-207ENST00000591519 MTG1Q9BT17 334 aaPredicted RBP12.17□□□□□ -0.46
VPS4B-207ENST00000591519 MTIF3Q9H2K0 278 aaKnown RBP12.17□□□□□ -0.46
VPS4B-207ENST00000591519 DIAPH3Q9NSV4 1193 aa12.17□□□□□ -0.46
VPS4B-207ENST00000591519 ABCB11O95342 1321 aa12.16□□□□□ -0.46
VPS4B-207ENST00000591519 UMODL1Q5DID0 1318 aa12.16□□□□□ -0.46
VPS4B-207ENST00000591519 GRXCR1A8MXD5 290 aa12.16□□□□□ -0.46
VPS4B-207ENST00000591519 B4E1Z4 1266 aa12.16□□□□□ -0.46
VPS4B-207ENST00000591519 IMMTQ16891 758 aaKnown RBP12.16□□□□□ -0.46
VPS4B-207ENST00000591519 ASPRV1Q53RT3 343 aa12.16□□□□□ -0.46
VPS4B-207ENST00000591519 BRDTQ58F21 947 aaPredicted RBP12.16□□□□□ -0.46
VPS4B-207ENST00000591519 NFRKBQ6P4R8 1299 aa12.16□□□□□ -0.46
VPS4B-207ENST00000591519 CCDC62Q6P9F0 684 aa12.16□□□□□ -0.46
VPS4B-207ENST00000591519 ADGRF4Q8IZF3 695 aa12.16□□□□□ -0.46
VPS4B-207ENST00000591519 ENAHQ8N8S7 591 aaPredicted RBP12.16□□□□□ -0.46
VPS4B-207ENST00000591519 OR6J1Q8NGC5 347 aa12.16□□□□□ -0.46
VPS4B-207ENST00000591519 TBC1D5Q92609 795 aa12.16□□□□□ -0.46
VPS4B-207ENST00000591519 WNT2BQ93097 391 aa12.16□□□□□ -0.46
VPS4B-207ENST00000591519 IWS1Q96ST2 819 aa12.16□□□□□ -0.46
VPS4B-207ENST00000591519 KRT23Q9C075 422 aa12.16□□□□□ -0.46
VPS4B-207ENST00000591519 WNT8AQ9H1J5 351 aa12.16□□□□□ -0.46
VPS4B-207ENST00000591519 KAT14Q9H8E8 782 aa12.16□□□□□ -0.46
VPS4B-207ENST00000591519 CXXC1Q9P0U4 656 aaPredicted RBP12.16□□□□□ -0.46
VPS4B-207ENST00000591519 PCDHGA10Q9Y5H3 936 aa12.16□□□□□ -0.46
VPS4B-207ENST00000591519 PFKMP08237 780 aa12.15□□□□□ -0.46
VPS4B-207ENST00000591519 TXNP10599 105 aaKnown RBP12.15□□□□□ -0.46
VPS4B-207ENST00000591519 CCL23P55773 120 aa12.15□□□□□ -0.46
VPS4B-207ENST00000591519 PTPN11Q06124 597 aaPredicted RBP12.15□□□□□ -0.46
VPS4B-207ENST00000591519 TTLL4Q14679 1199 aa12.15□□□□□ -0.46
VPS4B-207ENST00000591519 PPP2R5BQ15173 497 aa12.15□□□□□ -0.46
VPS4B-207ENST00000591519 RAB30Q15771 203 aa12.15□□□□□ -0.46
VPS4B-207ENST00000591519 CDC37Q16543 378 aaPredicted RBP12.15□□□□□ -0.46
VPS4B-207ENST00000591519 NBPF20Q3BBV1 942 aa12.15□□□□□ -0.46
VPS4B-207ENST00000591519 MCF2L2Q86YR7 1114 aa12.15□□□□□ -0.46
VPS4B-207ENST00000591519 SYTL5Q8TDW5 730 aaPredicted RBP12.15□□□□□ -0.46
VPS4B-207ENST00000591519 NSUN6Q8TEA1 469 aaKnown RBP12.15□□□□□ -0.46
VPS4B-207ENST00000591519 CPVLQ9H3G5 476 aa12.15□□□□□ -0.46
VPS4B-207ENST00000591519 CNNM2Q9H8M5 875 aa12.15□□□□□ -0.46
VPS4B-207ENST00000591519 TRMT13Q9NUP7 481 aaKnown RBP12.15□□□□□ -0.46
VPS4B-207ENST00000591519 SCN10AQ9Y5Y9 1956 aa12.15□□□□□ -0.46
VPS4B-207ENST00000591519 TNKSO95271 1327 aa12.14□□□□□ -0.47
VPS4B-207ENST00000591519 RAD50Q92878 1312 aa12.14□□□□□ -0.47
VPS4B-207ENST00000591519 LAMA4Q16363 1823 aa12.14□□□□□ -0.47
VPS4B-207ENST00000591519 MYL3P08590 195 aa12.14□□□□□ -0.47
VPS4B-207ENST00000591519 PARP1P09874 1014 aaKnown RBP12.14□□□□□ -0.47
VPS4B-207ENST00000591519 GHRHRQ02643 423 aa12.14□□□□□ -0.47
VPS4B-207ENST00000591519 SEC23AQ15436 765 aa12.14□□□□□ -0.47
VPS4B-207ENST00000591519 PROX2Q3B8N5 592 aa12.14□□□□□ -0.47
VPS4B-207ENST00000591519 USH1GQ495M9 461 aa12.14□□□□□ -0.47
VPS4B-207ENST00000591519 OTOP2Q7RTS6 562 aa12.14□□□□□ -0.47
VPS4B-207ENST00000591519 COPS5Q92905 334 aa12.14□□□□□ -0.47
VPS4B-207ENST00000591519 MTMR8Q96EF0 704 aa12.14□□□□□ -0.47
VPS4B-207ENST00000591519 TAAR1Q96RJ0 339 aa12.14□□□□□ -0.47
VPS4B-207ENST00000591519 JMJD4Q9H9V9 463 aa12.14□□□□□ -0.47
VPS4B-207ENST00000591519 MAP3K20Q9NYL2 800 aaKnown RBP12.14□□□□□ -0.47
VPS4B-207ENST00000591519 MSRAQ9UJ68 235 aa12.14□□□□□ -0.47
VPS4B-207ENST00000591519 MRPL11Q9Y3B7 192 aaKnown RBP12.14□□□□□ -0.47
VPS4B-207ENST00000591519 EYSQ5T1H1 3165 aa12.14□□□□□ -0.47
VPS4B-207ENST00000591519 MYO9BQ13459 2157 aa12.13□□□□□ -0.47
VPS4B-207ENST00000591519 EIF3JO75822 258 aaKnown RBP12.13□□□□□ -0.47
VPS4B-207ENST00000591519 ARIH2O95376 493 aa12.13□□□□□ -0.47
VPS4B-207ENST00000591519 NEFLP07196 543 aa12.13□□□□□ -0.47
VPS4B-207ENST00000591519 CENPBP07199 599 aaPredicted RBP12.13□□□□□ -0.47
VPS4B-207ENST00000591519 CYP2C9P11712 490 aa12.13□□□□□ -0.47
VPS4B-207ENST00000591519 STXBP2Q15833 593 aa12.13□□□□□ -0.47
VPS4B-207ENST00000591519 QRICH1Q2TAL8 776 aa12.13□□□□□ -0.47
VPS4B-207ENST00000591519 FBXO11Q86XK2 927 aa12.13□□□□□ -0.47
VPS4B-207ENST00000591519 SAMD3Q8N6K7 520 aa12.13□□□□□ -0.47
VPS4B-207ENST00000591519 RMDN3Q96TC7 470 aa12.13□□□□□ -0.47
VPS4B-207ENST00000591519 IL25Q9H293 177 aa12.13□□□□□ -0.47
VPS4B-207ENST00000591519 COL20A1Q9P218 1284 aa12.13□□□□□ -0.47
VPS4B-207ENST00000591519 PRUNE2Q8WUY3 3088 aa12.12□□□□□ -0.47
VPS4B-207ENST00000591519 PALM3A6NDB9 673 aaPredicted RBP12.12□□□□□ -0.47
VPS4B-207ENST00000591519 IQCF3P0C7M6 154 aa12.12□□□□□ -0.47
VPS4B-207ENST00000591519 COL9A1P20849 921 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms