RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 ELP1O95163 1332 aa10.58□□□□□ -0.71
DNMT1-223ENST00000591239 ZEB2O60315 1214 aa10.58□□□□□ -0.72
DNMT1-223ENST00000591239 SEC24BO95487 1268 aa10.58□□□□□ -0.72
DNMT1-223ENST00000591239 CCND2P30279 289 aa10.58□□□□□ -0.72
DNMT1-223ENST00000591239 CPT1AP50416 773 aa10.58□□□□□ -0.72
DNMT1-223ENST00000591239 LY6KQ17RY6 165 aa10.58□□□□□ -0.72
DNMT1-223ENST00000591239 WWC2Q6AWC2 1192 aa10.58□□□□□ -0.72
DNMT1-223ENST00000591239 CXCL17Q6UXB2 119 aa10.58□□□□□ -0.72
DNMT1-223ENST00000591239 CHRDL2Q6WN34 429 aa10.58□□□□□ -0.72
DNMT1-223ENST00000591239 IL31RAQ8NI17 732 aa10.58□□□□□ -0.72
DNMT1-223ENST00000591239 SMARCC2Q8TAQ2 1214 aa10.58□□□□□ -0.72
DNMT1-223ENST00000591239 COPS5Q92905 334 aa10.58□□□□□ -0.72
DNMT1-223ENST00000591239 PDRG1Q9NUG6 133 aa10.58□□□□□ -0.72
DNMT1-223ENST00000591239 COLQQ9Y215 455 aaPredicted RBP10.58□□□□□ -0.72
DNMT1-223ENST00000591239 FRMPD4Q14CM0 1322 aa10.58□□□□□ -0.72
DNMT1-223ENST00000591239 STXBP3O00186 592 aa10.57□□□□□ -0.72
DNMT1-223ENST00000591239 PQBP1O60828 265 aaKnown RBP10.57□□□□□ -0.72
DNMT1-223ENST00000591239 CABYRO75952 493 aa10.57□□□□□ -0.72
DNMT1-223ENST00000591239 RGS20O76081 388 aa10.57□□□□□ -0.72
DNMT1-223ENST00000591239 VASPP50552 380 aaPredicted RBP10.57□□□□□ -0.72
DNMT1-223ENST00000591239 NAPAP54920 295 aa10.57□□□□□ -0.72
DNMT1-223ENST00000591239 CCT2P78371 535 aaKnown RBP10.57□□□□□ -0.72
DNMT1-223ENST00000591239 TLE2Q04725 743 aa10.57□□□□□ -0.72
DNMT1-223ENST00000591239 UBE2SQ16763 222 aa10.57□□□□□ -0.72
DNMT1-223ENST00000591239 ANKRD33Q7Z3H0 272 aa10.57□□□□□ -0.72
DNMT1-223ENST00000591239 ZNF274Q96GC6 653 aaPredicted RBP10.57□□□□□ -0.72
DNMT1-223ENST00000591239 LARP6Q9BRS8 491 aaKnown RBP10.57□□□□□ -0.72
DNMT1-223ENST00000591239 NCOA5Q9HCD5 579 aaKnown RBP10.57□□□□□ -0.72
DNMT1-223ENST00000591239 BARHL2Q9NY43 387 aa10.57□□□□□ -0.72
DNMT1-223ENST00000591239 PCDH10Q9P2E7 1040 aa10.57□□□□□ -0.72
DNMT1-223ENST00000591239 PRKAG2Q9UGJ0 569 aa10.57□□□□□ -0.72
DNMT1-223ENST00000591239 DDX41Q9UJV9 622 aaKnown RBP10.57□□□□□ -0.72
DNMT1-223ENST00000591239 MRVI1Q9Y6F6 885 aa10.57□□□□□ -0.72
DNMT1-223ENST00000591239 KIAA1217Q5T5P2 1943 aa10.56□□□□□ -0.72
DNMT1-223ENST00000591239 A0A0U1RQG5 324 aaPredicted RBP10.56□□□□□ -0.72
DNMT1-223ENST00000591239 A6NJR5 290 aa10.56□□□□□ -0.72
DNMT1-223ENST00000591239 DCDC2CA8MYV0 355 aa10.56□□□□□ -0.72
DNMT1-223ENST00000591239 hCG_1984214I3L0E3 225 aa10.56□□□□□ -0.72
DNMT1-223ENST00000591239 ARVCFO00192 962 aa10.56□□□□□ -0.72
DNMT1-223ENST00000591239 PRPF3O43395 683 aaKnown RBP10.56□□□□□ -0.72
DNMT1-223ENST00000591239 STAM2O75886 525 aa10.56□□□□□ -0.72
DNMT1-223ENST00000591239 GH1P01241 217 aa10.56□□□□□ -0.72
DNMT1-223ENST00000591239 TGFB3P10600 412 aa10.56□□□□□ -0.72
DNMT1-223ENST00000591239 SCG2P13521 617 aa10.56□□□□□ -0.72
DNMT1-223ENST00000591239 MAGEA10P43363 369 aaPredicted RBP10.56□□□□□ -0.72
DNMT1-223ENST00000591239 CDK7P50613 346 aa10.56□□□□□ -0.72
DNMT1-223ENST00000591239 MRPS9P82933 396 aaKnown RBP10.56□□□□□ -0.72
DNMT1-223ENST00000591239 PURAQ00577 322 aaKnown RBP10.56□□□□□ -0.72
DNMT1-223ENST00000591239 ARHGAP1Q07960 439 aa10.56□□□□□ -0.72
DNMT1-223ENST00000591239 NTRK3Q16288 839 aa10.56□□□□□ -0.72
DNMT1-223ENST00000591239 PFKFB3Q16875 520 aaPredicted RBP10.56□□□□□ -0.72
DNMT1-223ENST00000591239 BRDTQ58F21 947 aaPredicted RBP10.56□□□□□ -0.72
DNMT1-223ENST00000591239 TYW1BQ6NUM6 668 aa10.56□□□□□ -0.72
DNMT1-223ENST00000591239 PPP1R18Q6NYC8 613 aa10.56□□□□□ -0.72
DNMT1-223ENST00000591239 KCNV1Q6PIU1 500 aa10.56□□□□□ -0.72
DNMT1-223ENST00000591239 ZNF713Q8N859 430 aaPredicted RBP10.56□□□□□ -0.72
DNMT1-223ENST00000591239 PHKBQ93100 1093 aa10.56□□□□□ -0.72
DNMT1-223ENST00000591239 IL17RAQ96F46 866 aa10.56□□□□□ -0.72
DNMT1-223ENST00000591239 ZFP91Q96JP5 570 aaPredicted RBP10.56□□□□□ -0.72
DNMT1-223ENST00000591239 TOX2Q96NM4 488 aa10.56□□□□□ -0.72
DNMT1-223ENST00000591239 GDF15Q99988 308 aa10.56□□□□□ -0.72
DNMT1-223ENST00000591239 PRO3102Q9H379 93 aa10.56□□□□□ -0.72
DNMT1-223ENST00000591239 RIC8AQ9NPQ8 531 aa10.56□□□□□ -0.72
DNMT1-223ENST00000591239 PRDM5Q9NQX1 630 aaPredicted RBP10.56□□□□□ -0.72
DNMT1-223ENST00000591239 PDLIM7Q9NR12 457 aa10.56□□□□□ -0.72
DNMT1-223ENST00000591239 POLR3EQ9NVU0 708 aa10.56□□□□□ -0.72
DNMT1-223ENST00000591239 RBM27Q9P2N5 1060 aaKnown RBP10.56□□□□□ -0.72
DNMT1-223ENST00000591239 MROH7Q68CQ1 1323 aa10.56□□□□□ -0.72
DNMT1-223ENST00000591239 SZT2Q5T011 3432 aa10.55□□□□□ -0.72
DNMT1-223ENST00000591239 TRIM43BA6NCK2 446 aa10.55□□□□□ -0.72
DNMT1-223ENST00000591239 SMCO2A6NFE2 343 aa10.55□□□□□ -0.72
DNMT1-223ENST00000591239 SPDYE3A6NKU9 549 aa10.55□□□□□ -0.72
DNMT1-223ENST00000591239 KPNA6O60684 536 aa10.55□□□□□ -0.72
DNMT1-223ENST00000591239 PPFIA3O75145 1194 aa10.55□□□□□ -0.72
DNMT1-223ENST00000591239 MYL3P08590 195 aa10.55□□□□□ -0.72
DNMT1-223ENST00000591239 CLTBP09497 229 aa10.55□□□□□ -0.72
DNMT1-223ENST00000591239 IFNAR1P17181 557 aa10.55□□□□□ -0.72
DNMT1-223ENST00000591239 AKAP17AQ02040 695 aaKnown RBP10.55□□□□□ -0.72
DNMT1-223ENST00000591239 SP2Q02086 613 aa10.55□□□□□ -0.72
DNMT1-223ENST00000591239 FAAP100Q0VG06 881 aa10.55□□□□□ -0.72
DNMT1-223ENST00000591239 STK3Q13188 491 aa10.55□□□□□ -0.72
DNMT1-223ENST00000591239 ITGA7Q13683 1181 aa10.55□□□□□ -0.72
DNMT1-223ENST00000591239 PKN1Q16512 942 aa10.55□□□□□ -0.72
DNMT1-223ENST00000591239 GNPTABQ3T906 1256 aa10.55□□□□□ -0.72
DNMT1-223ENST00000591239 C8orf34Q49A92 452 aa10.55□□□□□ -0.72
DNMT1-223ENST00000591239 HABP4Q5JVS0 413 aaKnown RBP10.55□□□□□ -0.72
DNMT1-223ENST00000591239 PCNX4Q63HM2 1172 aa10.55□□□□□ -0.72
DNMT1-223ENST00000591239 XRRA1Q6P2D8 792 aa10.55□□□□□ -0.72
DNMT1-223ENST00000591239 SH3RF1Q7Z6J0 888 aa10.55□□□□□ -0.72
DNMT1-223ENST00000591239 TEX2Q8IWB9 1127 aa10.55□□□□□ -0.72
DNMT1-223ENST00000591239 SLC43A3Q8NBI5 491 aa10.55□□□□□ -0.72
DNMT1-223ENST00000591239 AFG1LQ8WV93 481 aa10.55□□□□□ -0.72
DNMT1-223ENST00000591239 EMID1Q96A84 441 aaPredicted RBP10.55□□□□□ -0.72
DNMT1-223ENST00000591239 TRIM43Q96BQ3 446 aaPredicted RBP10.55□□□□□ -0.72
DNMT1-223ENST00000591239 INPP4AQ96PE3 977 aaPredicted RBP10.55□□□□□ -0.72
DNMT1-223ENST00000591239 LBHD1Q9BQE6 289 aaPredicted RBP10.55□□□□□ -0.72
DNMT1-223ENST00000591239 RNF26Q9BY78 433 aaPredicted RBP10.55□□□□□ -0.72
DNMT1-223ENST00000591239 ALDH8A1Q9H2A2 487 aaPredicted RBP10.55□□□□□ -0.72
DNMT1-223ENST00000591239 RTEL1Q9NZ71 1219 aa10.55□□□□□ -0.72
DNMT1-223ENST00000591239 PCDHA6Q9UN73 950 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms