RNA–Protein interactions for RNA: ENST00000590506.1

NEDD4L-229, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-229ENST00000590506 FAM205CA6NFA0 338 aa8.49□□□□□ -1.05
NEDD4L-229ENST00000590506 RFX5P48382 616 aaPredicted RBP8.49□□□□□ -1.05
NEDD4L-229ENST00000590506 TIMM10P62072 90 aa8.49□□□□□ -1.05
NEDD4L-229ENST00000590506 NEXNQ0ZGT2 675 aa8.49□□□□□ -1.05
NEDD4L-229ENST00000590506 KRT71Q3SY84 523 aa8.49□□□□□ -1.05
NEDD4L-229ENST00000590506 RILPL1Q5EBL4 403 aa8.49□□□□□ -1.05
NEDD4L-229ENST00000590506 AGBL2Q5U5Z8 902 aa8.49□□□□□ -1.05
NEDD4L-229ENST00000590506 LRRC34Q8IZ02 419 aa8.49□□□□□ -1.05
NEDD4L-229ENST00000590506 EEF2KMTQ96G04 330 aa8.49□□□□□ -1.05
NEDD4L-229ENST00000590506 FAM117AQ9C073 453 aa8.49□□□□□ -1.05
NEDD4L-229ENST00000590506 BIN2Q9UBW5 565 aaPredicted RBP8.49□□□□□ -1.05
NEDD4L-229ENST00000590506 FBXL5Q9UKA1 691 aa8.49□□□□□ -1.05
NEDD4L-229ENST00000590506 MYH6P13533 1939 aa8.49□□□□□ -1.05
NEDD4L-229ENST00000590506 MYH2Q9UKX2 1941 aa8.49□□□□□ -1.05
NEDD4L-229ENST00000590506 NRXN3Q9Y4C0 1643 aa8.49□□□□□ -1.05
NEDD4L-229ENST00000590506 A0A1W2PQC6 194 aa8.49□□□□□ -1.05
NEDD4L-229ENST00000590506 ZNF213O14771 459 aa8.49□□□□□ -1.05
NEDD4L-229ENST00000590506 ZBTB43O43298 467 aa8.49□□□□□ -1.05
NEDD4L-229ENST00000590506 IMPDH2P12268 514 aa8.49□□□□□ -1.05
NEDD4L-229ENST00000590506 TPP2P29144 1249 aaPredicted RBP8.49□□□□□ -1.05
NEDD4L-229ENST00000590506 PCK1P35558 622 aa8.49□□□□□ -1.05
NEDD4L-229ENST00000590506 FLT3P36888 993 aa8.49□□□□□ -1.05
NEDD4L-229ENST00000590506 PRCPP42785 496 aa8.49□□□□□ -1.05
NEDD4L-229ENST00000590506 ERVK-9P63128 1117 aa8.49□□□□□ -1.05
NEDD4L-229ENST00000590506 MTA1Q13330 715 aa8.49□□□□□ -1.05
NEDD4L-229ENST00000590506 ITIH4Q14624 930 aa8.49□□□□□ -1.05
NEDD4L-229ENST00000590506 ERMARDQ5T6L9 678 aa8.49□□□□□ -1.05
NEDD4L-229ENST00000590506 RNF220Q5VTB9 566 aa8.49□□□□□ -1.05
NEDD4L-229ENST00000590506 KLHDC7AQ5VTJ3 777 aa8.49□□□□□ -1.05
NEDD4L-229ENST00000590506 ZNF530Q6P9A1 599 aaPredicted RBP8.49□□□□□ -1.05
NEDD4L-229ENST00000590506 PLEKHG4BQ96PX9 1271 aa8.49□□□□□ -1.05
NEDD4L-229ENST00000590506 TTYH3Q9C0H2 523 aa8.49□□□□□ -1.05
NEDD4L-229ENST00000590506 NEUROG2Q9H2A3 272 aa8.49□□□□□ -1.05
NEDD4L-229ENST00000590506 ESF1Q9H501 851 aaKnown RBP8.49□□□□□ -1.05
NEDD4L-229ENST00000590506 FAM217BQ9NTX9 383 aaPredicted RBP8.49□□□□□ -1.05
NEDD4L-229ENST00000590506 AATFQ9NY61 560 aaKnown RBP eCLIP8.49□□□□□ -1.05
NEDD4L-229ENST00000590506 ZNF232Q9UNY5 417 aa8.49□□□□□ -1.05
NEDD4L-229ENST00000590506 TRIM33Q9UPN9 1127 aa8.49□□□□□ -1.05
NEDD4L-229ENST00000590506 XDHP47989 1333 aa8.49□□□□□ -1.05
NEDD4L-229ENST00000590506 AFF2P51816 1311 aa8.49□□□□□ -1.05
NEDD4L-229ENST00000590506 NEO1Q92859 1461 aa8.49□□□□□ -1.05
NEDD4L-229ENST00000590506 GPR75-ASB3A0A0A6YYF3 556 aa8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 ZSCAN9O15535 394 aaPredicted RBP8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 NPTXRO95502 500 aa8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 MAGEA8P43361 318 aa8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 PMS1P54277 932 aaKnown RBP8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 ZBED6P86452 979 aa8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 RRP12Q5JTH9 1297 aaKnown RBP8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 ZNF317Q96PQ6 595 aaPredicted RBP8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 MYD88Q99836 296 aa8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 SELENOSQ9BQE4 189 aa8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 UBE2OQ9C0C9 1292 aaKnown RBP8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 SAMD15Q9P1V8 674 aa8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 PNMA2Q9UL42 364 aa8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 TBC1D2BQ9UPU7 963 aa8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 ASB3Q9Y575 518 aa8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 PDS5AQ29RF7 1337 aaKnown RBP8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 DDX60Q8IY21 1712 aaKnown RBP8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 NEURL1BA8MQ27 555 aa8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 SHBGP04278 402 aa8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 MMEP08473 750 aa8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 IFIT1P09914 478 aaKnown RBP8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 CHN1P15882 459 aa8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 CNGA1P29973 690 aa8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 ECHS1P30084 290 aa8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 EIF4A3P38919 411 aaKnown RBP8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 MSH2P43246 934 aa8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 KIF11P52732 1056 aa8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 ATP11AP98196 1134 aa8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 CTDSPL2Q05D32 466 aa8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 SLC39A6Q13433 755 aa8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 GCKRQ14397 625 aa8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 CCDC57Q2TAC2 916 aa8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 TMEM154Q6P9G4 183 aa8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 TMC4Q7Z404 712 aa8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 PIGWQ7Z7B1 504 aa8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 MYLK4Q86YV6 388 aaPredicted RBP8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 RBM12BQ8IXT5 1001 aaKnown RBP8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 LMNTD2Q8IXW0 634 aa8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 ATL2Q8NHH9 583 aa8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 KLHL29Q96CT2 875 aa8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 MTMR8Q96EF0 704 aa8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 RPS6KC1Q96S38 1066 aa8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 PSMD1Q99460 953 aa8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 MTFR1LQ9H019 292 aa8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 SUDS3Q9H7L9 328 aaPredicted RBP8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 ANKIB1Q9P2G1 1089 aa8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 NKX1-2Q9UD57 310 aaPredicted RBP8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 PACSIN2Q9UNF0 486 aaPredicted RBP8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 PCDHGA4Q9Y5G9 962 aa8.48□□□□□ -1.05
NEDD4L-229ENST00000590506 H7C1D1 291 aa8.47□□□□□ -1.05
NEDD4L-229ENST00000590506 ASAP2O43150 1006 aa8.47□□□□□ -1.05
NEDD4L-229ENST00000590506 ONECUT3O60422 494 aaPredicted RBP8.47□□□□□ -1.05
NEDD4L-229ENST00000590506 FTCDO95954 541 aa8.47□□□□□ -1.05
NEDD4L-229ENST00000590506 VIMP08670 466 aaKnown RBP8.47□□□□□ -1.05
NEDD4L-229ENST00000590506 SETSIPP0DME0 302 aa8.47□□□□□ -1.05
NEDD4L-229ENST00000590506 SRGNP10124 158 aa8.47□□□□□ -1.05
NEDD4L-229ENST00000590506 MYL6BP14649 208 aa8.47□□□□□ -1.05
NEDD4L-229ENST00000590506 RFC5P40937 340 aa8.47□□□□□ -1.05
NEDD4L-229ENST00000590506 DNM2P50570 870 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms